LOCUS CK334966 726 bp mRNA linear EST 12-MAY-2010 DEFINITION H3127H12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3127H12 5', mRNA sequence. ACCESSION CK334966 VERSION CK334966.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 726) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3127 row: H column: 12 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..726 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3127H12-5" /db_xref="taxon:10090" /clone="H3127H12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 258 a 134 c 100 g 234 t ORIGIN 1 ttctacttca aataaatttg aactaccaaa caacccagct ttattagcat aacgctcatt 61 tcaagataaa atgatccaca tcgtagatat tctagaaagc aatgttcttt ctactgcctt 121 accatcaata acaaatgctt caacatcatc agctccaatc tgtagctctt gctgcattgt 181 gtcaaaagaa atctctttgt tttccactgc cattcccata aaggtgagga gtctcatttt 241 cgccatattt tgctcatgta acaagcctaa attacagaac agtgaactct gttgagtgtc 301 aatgcaaggc ttccacaatt acatgtagta gttgtcacta tgtgtgagca cttacataga 361 acaaacctga caaattatac tggaccttag aatactgaag attttttcta aactatcgta 421 ttttatagta atcaatgaca gaatacatgt atttaggtct aaagttacac atgggctaca 481 agtatgtttt gaacagatag gcatgtttga taaggccaaa gaattatata aatcatttaa 541 tatttatata atttctaatg atatacacta ttataagcta ttaagatcac aaaacccttt 601 agaccttgaa gtcaatataa taagctatct tgttgttctt aaaactaact aactaactaa 661 ctaaaatcaa acccaaagat caagtaattg acttagttta cgaagtggaa ttatagccag 721 agaatt //