LOCUS CK334889 481 bp mRNA linear EST 12-MAY-2010 DEFINITION H3118D09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3118D09 5', mRNA sequence. ACCESSION CK334889 VERSION CK334889.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 481) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3118 row: D column: 09 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..481 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3118D09-5" /db_xref="taxon:10090" /clone="H3118D09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 151 a 71 c 92 g 167 t ORIGIN 1 cactgaagct ccattcgttt ggttctttac tgttgtgagg ggagaaagag aatgtgaaac 61 gttctgtgta ttattggatt tcaagcaata ttttagaaac cgtgtgactg ctttaataat 121 tttttccaat gctatttgaa tcatactacc agttacgcta aagctgaatg acaattgtgt 181 gaacattaat gccttcataa gatcaagtac accactgtta tgcagctgac atatagtata 241 ttacatttga ggctagtaaa ctatacagtt ttagatatta aatctcgtta cagggttatt 301 tatataatgt gacattattc tatactgaca gactacatga agtagtttta aaaagtagtg 361 ctatttttat ttcaaaagtt agcaatgaga aggaaatgtg acctggctgt gtttgtcttc 421 tgtacagaga ctgaagtgct tatgtttttc tgactaacaa tcacagaggg caaagttcaa 481 c //