LOCUS CK334716 620 bp mRNA linear EST 12-MAY-2010 DEFINITION H3098E03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3098E03 5', mRNA sequence. ACCESSION CK334716 VERSION CK334716.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 620) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3098 row: E column: 03 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..620 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3098E03-5" /db_xref="taxon:10090" /clone="H3098E03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 172 a 110 c 128 g 210 t ORIGIN 1 gtttggggct gtcggcttcc ttcataaata gaaacgtgta atgatggtac ccccgaatta 61 tttatatatt ggctataccc tttacccact cccctcgttt tttctcccat ttattgatgt 121 cagcacaaga ggtaaaagac aagatctgtg gatcatctaa aaaaaaatgt ggctttcatt 181 tcttgggaac agtatgaaca caatgattta cgttttttcc cattataatg ggtgcatttt 241 gttccgtcag aacaacagta aaaaaagata tgaagtgtac attgggttta ctatgtagag 301 tttaggtgaa ccttggctcc agcaaaacat tttgttgtaa ttacctcatg acttagggca 361 gttaactttt tcatttggta gtgctaaatg atgtcagagg caagactgaa ggaatttaac 421 agtgctttag ggcatgctgt gtcctttgca gtttggtgtg ttgtcctccc ctctccatgc 481 aattatagtt aaatggagga attacactta aaagatgcag cctgggctag tgctggaagt 541 acttaggtca aaattaggaa atccaaagcc tatttctcac ttgttaagat ggtttgtagc 601 tttggccaaa tctttttctt //