LOCUS CK334623 596 bp mRNA linear EST 12-MAY-2010 DEFINITION H3067E01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3067E01 3', mRNA sequence. ACCESSION CK334623 VERSION CK334623.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 596) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3067 row: E column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..596 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3067E01-3" /db_xref="taxon:10090" /clone="H3067E01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 169 a 138 c 120 g 169 t ORIGIN 1 ctcattaaac ttgttttaat ggtctcaaaa ttctgtgaca gatttttggt caagttgttt 61 ccattaaaaa gtactgattt tgaaaactaa taacttaaaa ctgccacaca caaaaaaaat 121 ggtccacaac attctttcct tctgaaggtt ttacgatgca ttgttatcat taaccagtct 181 tttactatta aacttaaatg gccaattgag acaaacagtt ctgagaccgt tcttccacca 241 ctgattaaga ctggggtggc aggtgttagg ggtaatattc atttagcctt ctgagctttc 301 tgggcagact tggtgacttt gccagctcca gcagccttct tgtccacagc tttgatgaca 361 cccacagcaa ctgtctgcct catgtcacga acagcaaagc gaccaagtgg agggtagtca 421 gagaagctct caacacacat gggcttgcca gggaccatat caacaatggc agcatcgcca 481 gacttcagga acttggggcc atcttccagc ttcttaccag aacgacgatc gatcttttct 541 ttaagctcag caaacttgca tgctatgtgg gctgtgtgac aatccagaac aggagc //