LOCUS CK334585 561 bp mRNA linear EST 12-MAY-2010 DEFINITION H3058H09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3058H09 3', mRNA sequence. ACCESSION CK334585 VERSION CK334585.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 561) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3058 row: H column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..561 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3058H09-3" /db_xref="taxon:10090" /clone="H3058H09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 150 a 87 c 94 g 230 t ORIGIN 1 aaaatatgtt aagcaatatg tgtgttttaa gaataacctg tctactttag tcagtttgtt 61 gaattttatt gtgataaggt tgtttataat ggtttatttt taaaaatatt tttatgaact 121 gtttttccag ctcttgattt atgttgctgt taattcatgt ttttctccca tattttttga 181 acagtcttgt tgaggcttga ttatccaatt tcacatcaac tttctacttc aatcatttct 241 gttagaagat cacttcctta tttatactaa ttaaatttat tttcctagtt taagaaagaa 301 actcacacaa gttattttac atcattcatt ttgaaatatt aaacattctt tgtatgacct 361 gctctttgac ctataggtta tttagaagag gctcacctat acatatttaa ggtttaagta 421 ttgttaatga cttctatttt aagtccactg ttttggacaa cactgctgca gtatttacct 481 tcttggggtg catgcccaca gtgtgtagtg gacgactcag cattgtgctc agagtgctat 541 gcagggggct ggcgagatgg c //