LOCUS CK334584 637 bp mRNA linear EST 12-MAY-2010 DEFINITION H3058G07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3058G07 5', mRNA sequence. ACCESSION CK334584 VERSION CK334584.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 637) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3058 row: G column: 07 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..637 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3058G07-5" /db_xref="taxon:10090" /clone="H3058G07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 219 a 129 c 173 g 116 t ORIGIN 1 ctcaccaaac tatactgaca ggtctaatat aaacgggcct ggaacaccta ggccacttaa 61 tcgaccaaag ctttctttgt cagccccctt gacaacaaat ggtttgcctg agagcacaga 121 tagcaaagat tctgagctgc agctaagtga agagaaaggc cacagtgatt cttcagcctc 181 tgaatcagaa gtttccttac tgagccctgt taaaaataaa catccagatg aagatgctgt 241 ggagtctgag gaacatgagg tgaaaagact gaagtttgac aaagaaggtg acgtcagaga 301 gacagctagc caaacggtgt ctggtgaagt ctcttcagtt agagcagagg aaacggaaac 361 agcagctccc cctcctgaca aggacagaga aagtcgaacc aggcagcact gtacagaaga 421 ggaggaggag gaggaggaag aagaggaaga ggaggaggaa gaatcgttta tgacaccaag 481 agaaatggtc ccagaaagaa aaaatcaaga aaaggaatct gatgacgcct taactgtgaa 541 tgaagagact tcagaggaga gccatcagat ggaaggctct ggtgtgtctc cagctcagac 601 agactccact tcagaaagga gtgacagtgc aggggcc //