LOCUS CK334510 547 bp mRNA linear EST 12-MAY-2010 DEFINITION H3042H05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3042H05 3', mRNA sequence. ACCESSION CK334510 VERSION CK334510.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 547) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3042 row: H column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..547 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3042H05-3" /db_xref="taxon:10090" /clone="H3042H05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 83 a 144 c 135 g 185 t ORIGIN 1 aagttttttt tttccttttt ttttttaaat gatttttttg tttgtttctg ttccattctt 61 tgtgttttgt tggttttggt ctctagctgt ttctctgttt tctccaaggc ttccctgcga 121 ctgtgtgtca gagagcccag gttatcccac tggtcgcaga tcttctggca ccgtgtgttg 181 acgttgtggg agtcatagta gtccagctcg ttgagctcct gagcaattgc agcaatctgc 241 tccactcggt cctggtgtgc agccaggtca ctttcaaagg cctcatgttt tcggatcaga 301 gctttgatgt ctgacagggc ggctgtctcg tagtcccgtt gcttcagcat ggcctccttc 361 ccatcagtcc aggcctcgtg gatggaagcc ttctgccgga acttctctgc caggtggtca 421 agccgttcca gcctacggat ttcattcagc agccattctt catagccctt ctcagcctgc 481 tccaggtgct gccatccatt gttgatgtcg gagacatcct gccctcggag ggcatgaagg 541 caggccg //