LOCUS CK334463 585 bp mRNA linear EST 12-MAY-2010 DEFINITION H3032E12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3032E12 5', mRNA sequence. ACCESSION CK334463 VERSION CK334463.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 585) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3032 row: E column: 12 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..585 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3032E12-5" /db_xref="taxon:10090" /clone="H3032E12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 185 a 131 c 154 g 115 t ORIGIN 1 ggaaccatgg aggctgttcc agagaagaaa aagaaggttg ccactgtgcc aggaaccctt 61 aagaaaaagg ttcctgctgg gccaaaaact ctcaagaaaa aggttcccgc tgtgccagaa 121 accctcaaga aaaagcgaag gaatttcgca gagttgaagg tgaagcgcct gaggaagaag 181 tttgccctga agacacttcg aaaggcaagg aggaagctca tctatgagaa ggcaaagcac 241 tatcacaagg agtacaggca gatgtaccgc actgagattc ggatggccag gatggcaagg 301 aaagctggca acttctatgt gcccgcagaa ccaaagctgg cctttgtcat cagaattcga 361 ggtatcaatg gagtaagccc aaaggttcgt aaggttctgc agctccttcg tcttcgacag 421 atcttcaatg gcacctttgt taagctcaac aaggcttcaa ttaacatgct gcggattgtg 481 gagccataca ttgcatgggg gtaccccaac ctgaagtcag taaacgagct catctacaag 541 cgaggctacg gcaaaatcaa caagaagcgg attgccttga cagat //