LOCUS CK334365 685 bp mRNA linear EST 12-MAY-2010 DEFINITION H3019F09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3019F09 5', mRNA sequence. ACCESSION CK334365 VERSION CK334365.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 685) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3019 row: F column: 09 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..685 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3019F09-5" /db_xref="taxon:10090" /clone="H3019F09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 259 a 123 c 193 g 110 t ORIGIN 1 atcaagagag cgctccaagg agcagagaag taggggtgat ggagaagaga agaagcacaa 61 agaagacaag gaggacagac gacacagaga tgacaaaaaa gagtccaaga aaaaacacag 121 cagaagcagg agcagagaga ggaaacacag gagcaggagc agaaacgcag ggaagcggag 181 caggagcagg agcaaggaca agtcaagcag acataaaaac gaaagcaagg agaaggcaaa 241 taaaagaagc agaagtggca gtcaaggaag aactggcagt gttgaaaaga gaaaacgaga 301 acacagccct agcagagaga agtctagaaa gcgcagcagg agccaagacc gttcccacaa 361 gagagagcat aatgatagca aggaccagtc agacagacag gatcatcaga gcagccagag 421 tggagagcca gagagccaag aaaaggaaca caaaagcaaa gatgagactg tgtgaagatt 481 gtgtaaactt ggatcacatt gaatcctata aatgttgatt aaattctgct tttttccccc 541 caagttgaga ttgtgcagta gttatgcact ctgagctccc cgtaggctgt gttttctttt 601 gtgtagggaa gtgcctttgt aatcccatta cgcattgatg ttttcaccct gttgagttga 661 cacatgatgc acagaatgtt cttgc //