LOCUS CK334310 594 bp mRNA linear EST 12-MAY-2010 DEFINITION H3015G01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3015G01 5', mRNA sequence. ACCESSION CK334310 VERSION CK334310.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 594) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3015 row: G column: 01 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..594 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3015G01-5" /db_xref="taxon:10090" /clone="H3015G01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 168 a 128 c 111 g 187 t ORIGIN 1 taagcttaca attgaattca ctgaagagta tcctaataag ccacctactg ttagatttgt 61 ctctaagatg ttccatccta acgtctatgc agatggtagt atatgtctgg atatacttca 121 gaaccgttgg agtccaacct atgatgtgtc ttccatttta acgtccatac agtctctatt 181 ggatgaacct aatcccaata gtccagcaaa cagccaggct gcccagctgt accaggagaa 241 caagcgggaa tatgaaaagc gtgtttctgc aatagtagaa caaagctggc gcgactgttg 301 actcagggta gagcagaaga agaggctggc cataagaaaa atgtatattg atgcatttat 361 caccttattc ctaattcatt acatttactt tattaaaaac aaaatagctg ttgtgctgtt 421 tctgtcttcc cttggcaagt ttttcttccc ctttctgtcc tcctgtggag catcagagac 481 attatttgaa atccaatgta ctgtacctgg gttacttgca aacattacaa ttgcatatgt 541 ccctttgttg tatctcatct ccagcctcaa agcagttatc aggttactgt actt //