LOCUS CK334300 660 bp mRNA linear EST 12-MAY-2010 DEFINITION H3014E11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3014E11 5', mRNA sequence. ACCESSION CK334300 VERSION CK334300.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 660) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3014 row: E column: 11 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..660 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3014E11-5" /db_xref="taxon:10090" /clone="H3014E11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 180 a 126 c 137 g 217 t ORIGIN 1 cagtttttac ctattgtgac tataaatgaa ttggcttatg aaccctacct ttggctacat 61 gtcagagggg tacagccaat ggtattaaaa aactaccaaa tgcaaaattt tgcatatgga 121 gaagtataca ggttctaaat aataaattag atcacaaatt tttgtgtctt tttaattagt 181 actacaggtt acattatgtg gtttttctac aggtattaaa tatattacaa gtttttttct 241 taccaatgaa taatttgagt atcattggtc tatttgacct atagagtatc ctctttctca 301 gagaatcacc cacagtgggt tacctcactt tgtgtgttta ttttttttca tttcctttac 361 attttggctg ttagtgttcc ttttttgtct ccgtgaacag ggaattttat atgtgaggct 421 tcagttggta ttgatagaag ttgccctctg actgtgcaga ttgacataac tatcaggggg 481 cagttgggca tagctccgcc cagcagagcc tgcacagtga agatgcagct catggtactc 541 gctgtggagt gtggcagcac ggaccgacag atcagcactc ctccacagct aagacagccc 601 agtcctgcgg caacacagct gcttgtaagt gcaaaaaggt ctgcagagac aagaagtctt //