LOCUS CK334186 611 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007H03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007H03 5', mRNA sequence. ACCESSION CK334186 VERSION CK334186.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 611) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3007 row: H column: 03 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..611 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007H03-5" /db_xref="taxon:10090" /clone="H3007H03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 147 a 162 c 150 g 152 t ORIGIN 1 cagatgccct gctcactagc ggatctgtgt cccaggacat gggctagcat cctgctccaa 61 actccaagtg accgtctaga gacaagatct gctaacccag cctttattta acctatactc 121 atctttcaat aaagcatgaa cgtgaaggac ttgccaacga ggaacgtgtc ttcagagcac 181 cacgcctgca gggcagccac agccctgcca cctccctgct cactgtctgt cagtgctgag 241 tagtagggtc aagccagtga ctgtctcagt tttcctccat catctcagag ggataggaaa 301 tgttcagtgt tcggtggcag caaagagagt atccctgaac gtttgaaaag ccgaaccgga 361 gctccgtagg atagcacggg ttttcataga cagccctccc gctctccagt tctgccttcc 421 tcggacctca ctgctttttg aaaaccctta agactataca gggtgtgctg cctcaccaac 481 tcaggatcac tgttgacggt agtttaagca gcatcaggat ctgctcgaac agaaaaaggt 541 tttaggggag cacggacggg gctgggcagc gatttgcatt ttctctatca agtggattgt 601 tggtatgttt g //