LOCUS CK334161 592 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007D07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007D07 5', mRNA sequence. ACCESSION CK334161 VERSION CK334161.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 592) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3007 row: D column: 07 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..592 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007D07-5" /db_xref="taxon:10090" /clone="H3007D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 132 a 145 c 182 g 133 t ORIGIN 1 ggtccatgca gacaggcagg cttcttgatg ttctgtctgg ccatgaggga cccgtcagtg 61 gtctttgctt taacccaatg aagtctatcc tggctagtgc ctcttgggac aagacagtgc 121 gtctgtggga catgttcgac agttggagaa ccaaagagac cttgactctg acctctgatg 181 ccctagctgt gactttccgg cctgatggtg cagagctggc tgtggccacg ctgaattcac 241 agatcacgtt ttgggaccct gagaatgctg tacgggtggg ctccatcgag ggcaggcatg 301 acctgaagac cggcaggaag gagctggaca agatcacagc caaacattca gccaagggca 361 aggccttcac taccctgtgt tactctgcgg acgggcagag catcctggcg ggaggcatgt 421 ccaagttcgt gtgcctttac cacgtccggg agcaaatcct ggtgaagagg tttgagctct 481 cctgcaacct gtctctggat gccatggagg aattcctgaa ccggagaaag atgacagagt 541 ttggcaacct ggcactcatt gatcaagatg ctggggagga gaatggggtg gc //