LOCUS CK334144 690 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007B03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007B03 5', mRNA sequence. ACCESSION CK334144 VERSION CK334144.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 690) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3007 row: B column: 03 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..690 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007B03-5" /db_xref="taxon:10090" /clone="H3007B03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 175 c 166 g 150 t ORIGIN 1 ctctgattca ttggttcctg gaggcgactc acacggacgc gcgctggaaa gatggagcaa 61 ctatccgatg aagagattga ccatggtgct gaagaagaca gcgacaagga agatcaggac 121 ctggataaaa tgtttggggc ctggcttgga gaactggaca ggcttactca gagtttggat 181 tctgacaagc ccaaagaacc agtaaaaaga tctcctcttc gccaggaaac aaatatggcc 241 aacttttctt accgcttctc catatacaac ttgaatgaag ctctgaatca gggtgagact 301 gtggacctgg atgccctgat ggctgacctc tgctctatag agcaggagct cagcagcatt 361 ggctcaggaa atagtaagcg tcaagtcaca gaaccaaaag ttcctcagaa gctacctgct 421 ggccgacata cgtcaaaaca tggcaccctg agaggaccgt catcttcctc taatagaaca 481 actaaacctt cccatgctaa ctactccctg gatgacatca ctgctcagtt agaacaggct 541 tccttgagca tggatgaggc tgctcagcaa tctctggtag aagatcctaa gcctttagtg 601 acaaatcagc acagaaggac tgcatcagca ggcactgtga gtgatgctga agcgcgctcc 661 atcagtaact cctcccggtc aagcatcacc //