LOCUS BX648241 6275 bp mRNA linear HTC 17-APR-2005
DEFINITION Homo sapiens mRNA; cDNA DKFZp686D12108 (from clone DKFZp686D12108).
ACCESSION BX648241
VERSION BX648241.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6275)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-FEB-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp686D12108) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686D12108
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..6275
/db_xref="H-InvDB:HIT000056888"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686D12108"
/tissue_type="fetal kidney"
/note="nidogen-2, differentially spliced, not fully
spliced"
/db_xref="taxon:9606"
CDS <2..3544
/codon_start=1
/gene="DKFZp686D12108"
/product="hypothetical protein"
/db_xref="GOA:Q5CZI2"
/db_xref="H-InvDB:HIT000056888.15"
/db_xref="InterPro:IPR000152"
/db_xref="InterPro:IPR000716"
/db_xref="InterPro:IPR000742"
/db_xref="InterPro:IPR001881"
/db_xref="InterPro:IPR003886"
/db_xref="InterPro:IPR006605"
/db_xref="InterPro:IPR009017"
/db_xref="InterPro:IPR009030"
/db_xref="InterPro:IPR013032"
/db_xref="InterPro:IPR018097"
/db_xref="InterPro:IPR024731"
/db_xref="InterPro:IPR026823"
/db_xref="InterPro:IPR036857"
/db_xref="UniProtKB/TrEMBL:Q5CZI2"
/protein_id="CAI56714.1"
/translation="TPQTERITHSSVSWSFLLRFSRGKLLMLRAAALHPDELFPHGES
WGDQLLQEGDDESSAVVKLANPLHFYEARFSNLYVGTNGIISTQDFPRETQYVDYDFP
TDFPAIAPFLADIDTSHGRGRVLYREDTSPAVLGLAARYVRAGFPRSARFTPTHAFLA
TWEQVGAYEEVKRGALPSGELNTFQAVLASDGSDSYALFLYPANGLQFLGTRPKESYN
VQLQLPARVGFCRGEADDLKSEGPYFSLTSTEQSVKNLYQLSNLGIPGVWAFHIGSTS
PLDNVRPAAVGDLSAAHSSVPLGRSFSHATALESDYNEDNLDYYDVNEEEAEYLPGEP
EEALNGHSSIDVSFQSKVDTKHLEESSTLDPHTKEGTSLGEVGGPDLKGQVEPWDERE
TRSPAPPEVDRDSLAPSWETPPPYPENGSIQPYPDGGPVPSEMDVPPAHPEEEIVLRS
YPASDHTTPLSRGTYEVGLEDNIGSNTEVFTYNAANKETCEHNHRQCSRHAFCTDYAT
GFCCHCQSKFYGNGKHCLPEGAPHRVNGKVSGHLHVGHTPVHFTDVDLHAYIVGNDGR
AYTAISHIPQPAAQALLPLTPIGGLFGWLFALEKPGSENGFSLAGAAFTHDMEVTFYP
GEETVRITQTAEGLDPENYLSIKTNIQGQVPYVSANFTAHISPYKELYHYSDSTVTST
SSRDYSLTFGAINQTWSYRIHQNITYQVCRHAPRHPSFPTTQQLNVDRVFALYNDEER
VLRFAVTNQIGPVKEDSDPTPVNPCYDGSHMCDTTARCHPGTGVDYTCECASGYQGDG
RNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCILITPPANPCED
GSHTCAPAGQARCVHHGGSTFSCACLPGYAGDGHQCTDVDECSENRCHPAATCYNTPG
SFSCRCQPGYYGDGFQCIPDSTSSLTPCEQQQRHAQAQYAYPGARFHIPQCDEQGNFL
PLQCHGSTGFCWCVDPDGHEVPGTQTPPGSTPPHCGPSPEPTQRPPTICERWRENLLE
HYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGREVQGTRSQPGTTPACIP
TVAPPMVRPTPRPDVTPPSVGTFLLYTQGQQIGYLPLNGTRLQKDAAKTLLSLHVKWI
SPVGGRAAWLSQWEPPHRPCCSEVDWCREVLEGF"
BASE COUNT 1636 a 1635 c 1510 g 1494 t
ORIGIN
1 gactccccaa acggagcgga tcacacacag tagtgtttca tggtctttcc tgctgcggtt
61 ttcccggggg aagttgctaa tgttgcgggc cgcggcgctg cacccagacg agctcttccc
121 acacggggag tcgtgggggg accagctcct gcaggaaggc gacgacgaaa gctcagccgt
181 ggtgaagctg gcgaatcccc tgcacttcta cgaagcccga ttcagcaacc tctacgtggg
241 caccaacggc atcatctcca ctcaggactt ccccagggaa acgcagtatg tggactatga
301 cttccccacc gacttcccgg ccatcgcccc ttttctggcg gacatcgaca cgagccacgg
361 cagaggccga gtcctgtacc gagaggacac ctcccccgca gtgctgggcc tggccgcccg
421 ctatgtgcgc gctggcttcc cgcgctctgc gcgctttacc cccacccacg ccttcctggc
481 cacctgggag caggtaggcg cttacgagga ggtcaagcgc ggggcgctgc cctcgggaga
541 gctgaacact ttccaggcag ttttggcatc tgatgggtct gatagctacg ccctctttct
601 ttatcctgcc aacggcctgc agttccttgg aacccgcccc aaagagtctt acaatgtcca
661 gcttcagctt ccagctcggg tgggcttctg ccgaggggag gctgatgatc tgaagtcaga
721 aggaccatat ttcagcttga ctagcactga acagtctgtg aaaaatctct atcaactaag
781 caacctgggg atccctggag tgtgggcttt ccatatcggc agcacttccc cgttggacaa
841 tgtcaggcca gctgcagttg gagacctttc cgctgcccac tcttctgttc ccctgggacg
901 ttccttcagc catgctacag ccctggaaag tgactataat gaggacaatt tggattacta
961 cgatgtgaat gaggaggaag ctgaatacct tccgggtgaa ccagaggagg cattgaatgg
1021 ccacagcagc attgatgttt ccttccaatc caaagtggat acaaagcatt tagaggaatc
1081 ttccaccttg gatcctcaca ccaaagaagg aacatctctg ggagaggtag ggggcccaga
1141 tttaaaaggc caagttgagc cctgggatga gagagagacc agaagcccag ctccaccaga
1201 ggtagacaga gattcactgg ctccttcctg ggaaacccca ccaccgtacc ccgaaaacgg
1261 aagcatccag ccctacccag atggagggcc agtgccttcg gaaatggatg ttcccccagc
1321 tcatcctgaa gaagaaattg ttcttcgaag ttaccctgct tcagatcaca ctacaccctt
1381 aagtcgaggg acgtatgagg tgggactgga agacaacata ggttccaaca ccgaggtctt
1441 cacgtataat gctgccaaca aggaaacctg tgaacacaac cacagacaat gctcccggca
1501 tgccttctgc acggactatg ccactggctt ctgctgccac tgccaatcca agttttatgg
1561 aaatgggaag cactgtctgc ctgaaggggc acctcaccga gtgaatggga aagtgagtgg
1621 ccacctccac gtgggccata cacccgtgca cttcactgat gtggacctgc atgcgtatat
1681 cgtgggcaat gatggcagag cctacacggc catcagccac atcccacagc cagcagccca
1741 ggccctcctc cccctcacac caattggagg cctgtttggc tggctctttg ctttagaaaa
1801 acctggctct gagaacggct tcagcctcgc aggtgctgcc tttacccatg acatggaagt
1861 tacattctac ccgggagagg agacggttcg tatcactcaa actgctgagg gacttgaccc
1921 agagaactac ctgagcatta agaccaacat tcaaggccag gtgccttacg tctcagcaaa
1981 tttcacagcc cacatctctc cctacaagga gctgtaccac tactccgact ccactgtgac
2041 ctctacaagt tccagagact actctctgac ttttggtgca atcaaccaaa catggtccta
2101 ccgcatccac cagaacatca cttaccaggt gtgcaggcac gcccccagac acccgtcctt
2161 ccccaccacc cagcagctga acgtggaccg ggtctttgcc ttgtataatg acgaagaaag
2221 agtgcttaga tttgctgtga ccaatcaaat tggcccggtc aaagaagatt cagaccccac
2281 tccggtgaat ccttgctatg atgggagcca catgtgtgac acaacagcac ggtgccatcc
2341 agggacaggt gtagattaca cctgtgagtg cgcatctggg taccagggag atggacggaa
2401 ctgtgtggat gaaaatgaat gtgcaactgg ctttcatcgc tgtggcccca actctgtatg
2461 tatcaacttg cctggaagct acaggtgtga gtgccggagt ggttatgagt ttgcagatga
2521 ccggcatact tgcatcttga tcaccccacc tgccaacccc tgtgaggatg gcagtcatac
2581 ctgtgctcct gctgggcagg cccggtgtgt tcaccatgga ggcagcacgt tcagctgtgc
2641 ctgcctgcct ggttatgccg gcgatgggca ccagtgcact gatgtagatg aatgctcaga
2701 aaacagatgt caccctgcag ctacctgcta caatactcct ggttccttct cctgccgttg
2761 tcaacccgga tattatgggg atggatttca gtgcatacct gactccacct caagcctgac
2821 accctgtgaa caacagcagc gccatgccca ggcccagtat gcctaccctg gggcccggtt
2881 ccacatcccc caatgcgacg agcagggcaa cttcctgccc ctacagtgtc atggcagcac
2941 tggtttctgc tggtgcgtgg accctgatgg tcatgaagtt cctggtaccc agactccacc
3001 tggctccacc ccgcctcact gtggaccatc accagagccc acccagaggc ccccgaccat
3061 ctgtgagcgc tggagggaaa acctgctgga gcactacggt ggcacccccc gggatgacca
3121 gtacgtgccc cagtgcgatg acctgggcca cttcatcccc ctgcagtgcc acggaaagag
3181 cgacttctgc tggtgtgtgg acaaagatgg cagagaggtg cagggcaccc gctcccagcc
3241 aggcaccacc cctgcgtgta tacccaccgt cgctccaccc atggtccggc ccacgccccg
3301 gccagatgtg acccctccat ctgtgggcac cttcctgctc tatactcagg gccagcagat
3361 tggctactta cccctcaatg gcaccaggct tcagaaggat gcagctaaga ccctgctgtc
3421 tctgcatgta aagtggattt ctcctgtagg gggcagggct gcgtggcttt cccagtggga
3481 gccacctcac aggccctgtt gcagtgaggt ggactggtgc agggaagtcc tggagggttt
3541 ctgagctgca gcccatcggc atgggcccga tgccaccacc ataggaccag ggctctctct
3601 tgctgggagt cacctgtcac tgaccaaggc tgtgctctct ggttcgttca tggagtttca
3661 gataatatgg aaagggaacc ttagagttgt cagcacatgg aggctgtatg gtgatccaag
3721 ggaaaatgga ccgactctta ccctaagtcc ccagggttgt atgtcataac atctccatgg
3781 aaatcctgga aatcaaagtg acaggacaac cagtcacaag gtgtgatctc tgcggtttgt
3841 tggggactcc aagtggaagt cagttaatga ctgtctcacc gttgcagccc ttccctttca
3901 ctttggttct gtccctttga cccacttctt tcctaacctt ccctgactcc atagatgaaa
3961 acttgaggag tgtgtgatgc tgggagagga gtggatggag ccttccccag gggatgtttg
4021 atgcttcctg agccagcagc ctccctaatg caaggcaccc cattttgggg agcgggtttt
4081 ctcaaaaatg gaggaaaaaa aagggtggct gtctcgaatg gcatcgacac agtggaaaat
4141 catctgattc cattgttgaa cttcacactc caggcacttg ctcatcccta agaaagaata
4201 gtacggcatt caagtttaca tttacttctg ttaatgaacg acacttattt ggttccagaa
4261 aagcttagag gcagccagtg tttaggaaga gatgtgttct ttttaagatt cgagtttgtt
4321 gggtcctgtc ccctccccca agaaaactct cacattgttt tgtaaaactt tctctggaag
4381 aggtagagac taagaagttg acatcacttt aagctaaccc tcttttattc aagtcataga
4441 gcttgattgc ctttctgaac atgcccctga ccaggacagg gtggtgatgg tagtggtagt
4501 ggaactgaaa gaaatgggac gtgggttatt tgcacatttt aaggaaattt acttaaactg
4561 ggactttttc tctaacctga ggttatgaca tgggtttatg aatcccatga ttcccgggtt
4621 aatggaagct catttgaatg tgtactcttg cctgggacaa acgacttttc aattttcaaa
4681 taaaagtgta gttgacctta ggcccgcccc ccatataagc tgcctgtttt tccactgaag
4741 ccaaatcccg ttttgtacaa tctttcttgg ctgactacgc tcccaggggg cgtaagtgaa
4801 gccaagcccc aggaggctgt taggcaaggc aggaacttgt atgacctcag ggacagccag
4861 ctaacccctg aatgttggct ttgcacatct gctgggcttc tcagagcagg agcctggatt
4921 ggaaactgaa tgaagcaagt tctgcatgga gttgaggaaa aatatcagac tcagcatttt
4981 tttttatttt tattattttt taaaagactt gccatagacc acatccgcag aacaatgtac
5041 tggacggaca gtgtcctgga taagatagag agcgccctgc tggatggctc tggtgaatcc
5101 ccgtgccatc gctgtggatc caatccgagg caacttgtac tggacagact ggaatagaga
5161 agctcctaaa attgaaacgt catctttaga tggagaaaac agaagaattc tgatcaatac
5221 agacattgga ttgcccaatg gcttaacctt tgaccctttc tctaaactgc tctgctgggc
5281 agatgcagga accaaaaaac tggagtgtac actacctgat ggaactggac ggcgtgtcat
5341 tcaaaacaac ctcaagtacc ccttcagcat cgtaagctat gcagatcact tctaccacac
5401 agactggagg agggatggtg ttgtatcagt aaataaacat agtggccagt ttactgatga
5461 gtatctccca gaacaacgat ctcacctcta cgggataact gcagtctacc cctactgccc
5521 aacaggaaga aagtaagtac agtaatgtaa aggaagactt ggagtttaca atcagaacct
5581 ggaccctaaa gaacagtgac tgcaaaggca aagaaagtaa aaaaggaatt ggccattaga
5641 cgttcctgag catccaagat gaacattttg tagtgcaaaa agacttttgt gaaaagctga
5701 tacctcaatc tttactactg tatttttaaa aatgaaggtt gttattgcaa gtttaaaaag
5761 gtaacagaat tttaactgtt gcttattaaa gcaacttctt gtaaacattt atcattaata
5821 tttaaaagat caaattcatt caactaagaa ttagagttta agactctaaa cctgattttt
5881 gccatggatt ccttctggcc aagaaattaa agcacatgtg atcaatataa caatataatc
5941 ctaaaccttg acagttggag aagccaatgc agaactgatg ggaaaggacc aattatttat
6001 agtttcccaa caaaagttct aagatttttt acctctgcat cagtgcattt ctatttatat
6061 caaaaggtgc taaaatgatt caatttgcat tttctgatcc tgtagtgcct ctatagaagt
6121 acccacagaa agtaaagtat cacatttata aataccaaag atgtaacaat tttaaaattt
6181 tctagattac tccaataaag tgttttaagt tttcctatga aaaaaaaaaa aaaaaaaaaa
6241 aaaaaaaaaa aaagaaaaaa aaaaaaaaaa aaaca
//