LOCUS BX648141 6291 bp mRNA linear HTC 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686I166 (from clone DKFZp686I166).
ACCESSION BX648141
VERSION BX648141.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6291)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp686I166) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686I166
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..6291
/db_xref="H-InvDB:HIT000056788"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686I166"
/tissue_type="cervix"
/note="fibronectin type III domain containing protein 3"
/db_xref="taxon:9606"
CDS 296..3892
/codon_start=1
/gene="DKFZp686I166"
/product="hypothetical protein"
/db_xref="GOA:Q9Y2H6"
/db_xref="H-InvDB:HIT000056788.15"
/db_xref="HGNC:HGNC:20296"
/db_xref="InterPro:IPR003961"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036116"
/db_xref="PDB:1WK0"
/db_xref="PDB:1X3D"
/db_xref="PDB:1X4X"
/db_xref="PDB:1X5X"
/db_xref="PDB:2CRM"
/db_xref="PDB:2CRZ"
/db_xref="UniProtKB/Swiss-Prot:Q9Y2H6"
/protein_id="CAI45989.1"
/translation="MAEHPPLLDTTQILSSDISLLSAPIVSADGTQQVILVQVNPGEA
FTIRREDGRFQCITGPAQVPMMSPNGSVPPIYVPPGYAPQVIEDNGVRRVVVVPQAPE
FHPGSHTVLHRSPHPPLPGFIPVPTMMPPPPRHMYSPVTGAGDMTTQYMPQYQSSQVY
GDVDAHSTHGRSNFRDERSSKTYERLQKKLKDRQGTQKDKMSSPPSSPQKCPSPINEH
NGLIKGQIAGGINTGSAKIKSGKGKGGTQVDTEIEEKDEETKAFEALLSNIVKPVASD
IQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITL
NDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWK
APSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYG
TSGFSEEVLYYTSGCAPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEE
TSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDKPGI
PVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHL
CDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVPPGPCLPPRLQGRPKAKEIQLR
WGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANK
MGFGPFSEKCDITTAPGPPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGG
VEGSMQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSVPGIV
TCLQEISDDEIENPHYSPSTCLAISWEKPCDHGSEILAYSIDFGDKQSLTVGKVTSYI
INNLQPDTTYRIRIQALNSLGAGPFSHMIKLKTKPLPPDPPRLECVAFSHQNLKLKWG
EGTPKTLSTDSIQYHLQMEDKNGRFVSLYRGPCHTYKVQRLNESTSYKFCIQACNEAG
EGPLSQEYIFTTPKSVPAALKAPKIEKVNDHICEITWECLQPMKGDPVIYSLQVMLGK
DSEFKQIYKGPDSSFRYSSLQLNCEYRFRVCAIRQCQDSLGHQDLVGPYSTTVLFISQ
RTEPPASTNRDTVESTRTRRALSDEQCAAVILVLFAFFSILIAFIIQYFVIK"
BASE COUNT 2011 a 1201 c 1246 g 1833 t
ORIGIN
1 agtagtaagc atggcggcgg cggcgttcgt ggtccctcgg gtgaaacaga aagcgggagc
61 tacgcggaga gggagcgaag agcggggctg aggcggcggc gtcactgcca ggaaacaacc
121 ccaacagtca gcgcgccggc ggccgcggcg gccctgagag ctgactctgc agctgaggta
181 gagagacaac gatcaggaac cctaagaaga ggcgccagag gagccgcctt ctgcctcaga
241 acggcgtgac tcggagaatt ggagcgttat tcagtatatt aatgtcttat tgataatggc
301 agaacatcca ccactactgg atacaactca gatcttaagt agtgatattt ctcttttgtc
361 tgcccctatt gtaagtgcag atggaacaca acaggttatt ctggtacaag ttaacccagg
421 agaagcattt acaataagaa gagaagatgg acggtttcag tgcattacag gtcctgctca
481 ggttccaatg atgtccccaa atggttctgt gcctcctatc tatgtgcctc ctggatatgc
541 cccacaggtt attgaagaca atggtgttcg aagagttgtc gtggtccctc aggcaccaga
601 gtttcaccct ggtagtcaca cagttctcca ccgttctcca catcctcctc tacctggttt
661 cattcctgtc ccaactatga tgccgcctcc accacgtcat atgtactcac ccgtgactgg
721 agctggagac atgacaacac agtatatgcc acagtatcag tcttcacaag tctatggaga
781 tgtagatgct cactctacac atggaaggtc caactttaga gatgaacgat ctagtaaaac
841 atatgaacgt ttgcagaaaa aattgaagga tcgccaagga acacagaaag ataaaatgag
901 cagtccacca tcatcacccc agaaatgccc ttctcccatt aatgaacata atggacttat
961 aaaaggacaa attgctggtg gtataaacac aggatcagca aaaatcaagt ctgggaaggg
1021 gaaaggtggt acacaagttg atacagaaat tgaagaaaaa gatgaagaaa ctaaagcatt
1081 tgaagcactt ctttccaaca ttgtcaaacc agtggcctcc gacatccagg caaggacagt
1141 agtacttacc tggtcaccac cttccagcct cattaatggt gaaacagatg aaagtagtgt
1201 accagagctc tatggttatg aagttctgat ctcaagtact ggaaaagatg ggaaatacaa
1261 aagtgtatat gtaggagaag aaacaaatat cactttaaat gatctcaagc cagccatgga
1321 ttaccatgca aaagtccagg cagaatataa ttctataaag ggaactcctt cagaggctga
1381 aatctttacc accttgagct gtgaacctga tatacctaat ccaccaagga tagccaatcg
1441 gaccaaaaat tcactcactt tgcaatggaa ggcacctagt gacaatggtt ctaaaatcca
1501 aaactttgta ttagaatggg atgaaggaaa aggaaatgga gaattttgtc agtgttacat
1561 gggctcacag aaacaattta aaattactaa actttcacca gcaatgggct gtaaattcag
1621 actatcggcc agaaatgact atggtacaag tggttttagt gaagaagtct tatattacac
1681 ctcaggctgt gctccttcta tgccagcaag tcctgtatta accaaggctg gaattacttg
1741 gttatcctta caatggagta agccctcagg aacaccatca gatgaaggaa tttcttacat
1801 tttagagatg gaggaagaaa cttcaggata tggttttaag cctaaatatg atggagaaga
1861 tcttgcttac acagtgaaaa atctcagacg tagtactaag tataaattta aggttattgc
1921 ttacaactca gaaggtaaaa gtaatccaag tgaagtagta gaatttacta cttgccctga
1981 taaaccaggc atacctgtaa agccttcagt gaaaggaaag atacattcac acagttttaa
2041 aataacctgg gatccaccaa aagacaatgg cggagcaacc atcaataaat atgtagtgga
2101 gatggcagaa ggttctaacg gaaacaaatg ggaaatgata tacagtggtg ctaccaggga
2161 acatctttgt gatcgactga atccaggctg tttctatcgt ttacgagttt actgcatcag
2221 tgatggagga cagagtgcgg tctctgaatc tttacttgtg cagactccag ctgtgcctcc
2281 tggcccatgc ctccctccca gattacaggg tagacccaaa gcaaaagaaa tacagttacg
2341 atggggaccc cctctggttg atggtggatc acccatttcc tgttacagtg tggaaatgtc
2401 tcctatagaa aaagatgaac ctagagaagt ttaccaaggt tctgaagtag aatgtacagt
2461 gagcagcctt cttcctggaa agacatacag cttcagacta cgtgcagcta acaaaatggg
2521 gtttggacca ttttcagaaa aatgtgatat tactacagcc cctgggccac cagatcagtg
2581 caagccccct caagtgacat gtagatctgc aacttgtgca caagtgaatt gggaggttcc
2641 tttgagtaat ggaacagatg tcactgaata tcgactggag tggggaggag ttgaaggaag
2701 tatgcagata tgttactgtg ggcctggtct cagttatgaa ataaaaggac tttcaccagc
2761 aactacctat tattgcaggg tccaggctct gagtgttgtg ggtgcaggcc ctttcagtga
2821 agtagtagcc tgtgtgactc caccatcagt tcctggcatt gtgacctgtc ttcaagaaat
2881 aagcgatgat gagatagaaa atccccatta ttcaccttct acatgccttg caataagctg
2941 ggaaaagcct tgtgatcatg gttcggaaat ccttgcctac agcatagact ttggagataa
3001 acaatcccta acagtgggaa aggttacaag ctatattatc aacaatttgc aaccagatac
3061 aacatacaga atacgaattc aagccttgaa tagccttgga gctggtcctt tcagccatat
3121 gataaaatta aaaactaagc ctctccctcc tgatccacct cgtctggaat gtgttgcctt
3181 tagccaccag aaccttaagc tgaaatgggg agaaggaact ccaaagacat tgtcaaccga
3241 ttctattcag taccaccttc agatggagga taagaatgga cggtttgtat ccctatacag
3301 aggaccatgt catacataca aagtacaaag acttaatgag tcaacatcct ataaattctg
3361 tattcaagct tgtaatgaag ctggggaagg tcccctctcc caagaatata ttttcactac
3421 tccaaaatct gtcccagctg ccttgaaagc ccccaaaata gagaaagtaa atgatcacat
3481 ttgtgaaatt acatgggagt gtttacagcc aatgaaaggt gatccagtta tttacagtct
3541 tcaagttatg ttgggaaaag attcagaatt caaacagatt tacaagggtc ccgactcttc
3601 cttccggtat tccagccttc agctgaactg tgaatatcgc ttccgtgtat gtgccattcg
3661 ccagtgccaa gactctctgg gacaccagga cctcgtaggt ccctacagca ccacagtgct
3721 cttcatctct cagaggactg aaccaccagc cagcaccaac agagacactg tggaaagcac
3781 aaggacccga cgggcactga gtgacgagca gtgtgctgcc gtcatccttg tgctgtttgc
3841 tttcttttcc attttgattg cctttatcat tcagtacttt gtaatcaagt gaaaatataa
3901 ctttattttt taactctatt acattttatt ttgtcatgta ctaaaattat ttctgtattg
3961 cttttataaa aaacagtggc atttagcact ggcattgaga ctatagcaca tcatttttgc
4021 cattttcagt gcttatattg ttaggtagag gctggcactt tattagaatg caagccacaa
4081 aaatatcaat tttgtttttt tttgttaggg tgggtcttct ttttttcttt ccctctctct
4141 ttttttaaca aatgccttct tatagaaaaa ctttctaaga ggcaacaatt tagaatggat
4201 attttgacga atcggcatga gtgtaacagt gataacctga tctgtttgtt ttaaagatta
4261 ttaccaagtg aaaaattcag aatgaataga atttacacta acatgctata taaaatgtta
4321 aagtctgatg ctgtgaaagc aatctagtgc tatatttcta cctcctcatt tgtcttaatt
4381 atttggtaag tgggattatg atgagtaact ggaggggctt agaaacaaaa actggatgaa
4441 agagtatgca tgaagaaaag cttctttgat aaatgtggag ttcttcatta taaatatata
4501 ttcatgaatt cacagataag tacttaaaga acagacagtt tacttggcct aaaaatattt
4561 tgatgtttac tcaaaaagta cctcttcagg tcttgagaac atggaaaaga attgagtgct
4621 tttaaatact ttttagaaag taatcataaa agtaaattga atttcaaacc tatttggctt
4681 ctgttttgtg aacctttgaa ctatatgtat gtgtataagg gtatacacat acatatatgg
4741 catataacaa gtgtacacat atacacataa caagtgtaga agtatatatt acatacatac
4801 actcactctg tctggtatag gctaattttg aagaactccc ataagtttct gctgcttctc
4861 ccataactgc tgccaccacc atcagaattc ataatcaaac ctaacctttt tgtttggggc
4921 accaaatctg aagacaaaat taatttgcac cagtaaactt caagctgctt tctttcttga
4981 aaactaaacg tttaacgtat aatgtctgtt tggatactgt tccaaattgt tgattgcatg
5041 tggttaatgt tgcattagag cactttgcaa ttgcataatt cattaatgtt ttgtgagctt
5101 gcatttgtga gttattggat gatcagactg aattttgtca agtatcacat tgtacatctt
5161 gcctagatgt cgatgactgc aagtaataat acagtttata atgaaactat ctacaattct
5221 tgttttagca catctgttat ccgtaaaaca cctgtaacta gcttttttaa tttattattt
5281 gaattttagg atagcgaatc actaattttt agttgctgag gttggcattt tagtgattat
5341 taagcacttc tgtcagtctt tgaaaaaaga acgtattttt tgtgctttga agatctctga
5401 agaatttctt ttataataga atgggcatgt attgtaacag ttttatgtca aatgatctgt
5461 gctgtagaaa aacattaacc cttgttcaaa aaagaaatgg ataaacttgg cctttctaag
5521 tggtaagaat gacctgtcac tataatatac tgtatgttta cattttattt aaattttatc
5581 tcttatgtat agggtgataa ccttccccag aaacaacagt gattgcgatt gttttctaga
5641 aacttcttta aagtgccaca tttggcagta caaatgagtc tgagtgtaat agcccagaga
5701 tttatatata gttgaatgtc taaaatggta aaatgtgcca ctgtgtcaag ttacagtggc
5761 ttatgttttt catagtaatt caaatgaact tcctattttt gatagtaaat gtcatttaat
5821 agtatacttg ccatttgagc ctcactgcaa aattagtgca gaggagaaaa caatttttaa
5881 tgtaatcttg attttacctc atatactgta cattccaaaa actctaaact ttttaaagat
5941 tatagataca ctaccaaaca tatcacctta aaattgtata aggctgaatg aacttcatac
6001 aaatgaaaaa aatctcataa aaatacataa actatgtagc aaaagtatct gtaaaatcca
6061 tggaaaataa aagttgtatc attctttttg agatacgttt attgtattca tatatattca
6121 ttatttgcta cctgtttaag aaagtgaaat gttatggtct cccctcttcc aatgagctta
6181 aaacattttt cccaacagta tataaatctt caacatgaga ggatgtatat ttattatata
6241 aagcccagta aagaataaaa ttagaagttt aaaaaaaaaa aaaaaaaaaa a
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