LOCUS BX648109 4625 bp mRNA linear HTC 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686E1432 (from clone DKFZp686E1432).
ACCESSION BX648109
VERSION BX648109.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4625)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp686E1432) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686E1432
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4625
/db_xref="H-InvDB:HIT000056756_05"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686E1432"
/tissue_type="testis"
/note="bromodomain-containing protein 2"
/db_xref="taxon:9606"
CDS 1616..4021
/codon_start=1
/gene="DKFZp686E1432"
/product="hypothetical protein"
/db_xref="GOA:P25440"
/db_xref="H-InvDB:HIT000056756_02.4"
/db_xref="HGNC:HGNC:1103"
/db_xref="InterPro:IPR001487"
/db_xref="InterPro:IPR018359"
/db_xref="InterPro:IPR027353"
/db_xref="InterPro:IPR036427"
/db_xref="InterPro:IPR038336"
/db_xref="PDB:1X0J"
/db_xref="PDB:2DVQ"
/db_xref="PDB:2DVR"
/db_xref="PDB:2DVS"
/db_xref="PDB:2DVV"
/db_xref="PDB:2E3K"
/db_xref="PDB:2G4A"
/db_xref="PDB:2YDW"
/db_xref="PDB:2YEK"
/db_xref="PDB:3AQA"
/db_xref="PDB:3ONI"
/db_xref="PDB:4A9E"
/db_xref="PDB:4A9F"
/db_xref="PDB:4A9H"
/db_xref="PDB:4A9I"
/db_xref="PDB:4A9J"
/db_xref="PDB:4A9M"
/db_xref="PDB:4A9N"
/db_xref="PDB:4A9O"
/db_xref="PDB:4AKN"
/db_xref="PDB:4ALG"
/db_xref="PDB:4ALH"
/db_xref="PDB:4J1P"
/db_xref="PDB:4MR5"
/db_xref="PDB:4MR6"
/db_xref="PDB:4QEU"
/db_xref="PDB:4QEV"
/db_xref="PDB:4QEW"
/db_xref="PDB:4UYF"
/db_xref="PDB:4UYG"
/db_xref="PDB:4UYH"
/db_xref="PDB:5BT5"
/db_xref="PDB:5DFB"
/db_xref="PDB:5DFC"
/db_xref="PDB:5DFD"
/db_xref="PDB:5DW1"
/db_xref="PDB:5EK9"
/db_xref="PDB:5HEL"
/db_xref="PDB:5HEM"
/db_xref="PDB:5HEN"
/db_xref="PDB:5HFQ"
/db_xref="PDB:5IBN"
/db_xref="PDB:5IG6"
/db_xref="PDB:5N2L"
/db_xref="PDB:5O38"
/db_xref="PDB:5O39"
/db_xref="PDB:5O3A"
/db_xref="PDB:5O3B"
/db_xref="PDB:5O3C"
/db_xref="PDB:5O3D"
/db_xref="PDB:5O3E"
/db_xref="PDB:5O3F"
/db_xref="PDB:5O3G"
/db_xref="PDB:5O3H"
/db_xref="PDB:5O3I"
/db_xref="PDB:5U5S"
/db_xref="PDB:5U6V"
/db_xref="PDB:5UEW"
/db_xref="PDB:5XHE"
/db_xref="PDB:5XHK"
/db_xref="PDB:6CUI"
/db_xref="PDB:6FFE"
/db_xref="PDB:6FFF"
/db_xref="PDB:6FFG"
/db_xref="PDB:6MO7"
/db_xref="PDB:6MO8"
/db_xref="PDB:6MO9"
/db_xref="PDB:6MOA"
/db_xref="UniProtKB/Swiss-Prot:P25440"
/protein_id="CAH56171.1"
/translation="MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYEGFE
SPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQP
VDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD
DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSVTSAHQVPAV
SSVSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVTAAPPAQPLAKK
KGVKRKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDS
QQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH
PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY
AKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEESE
SSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGR
AGADEDDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAP
PALPTGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPE
EIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRL
QDVSGQLNSTKKPPKKANEKTESSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDS
DSG"
BASE COUNT 1080 a 1302 c 1276 g 967 t
ORIGIN
1 ggggaggggg agggctagtc tgagccgcag ccgccgcctc ctccgctcgc cctcctccct
61 ggcgctgacc gatggaccag ccgctccgtg gggaggactc cggaccctgg tgggggggcg
121 ggggggttct ttcgcccccg tggcggaggg cccctgagag gcggatacgg gtgtgccttt
181 gggggtgatg tggcgtgtgg ggggaaaggt ccgagctcgc ctggaggggg agggtttttc
241 ccttaagtca tccctcccag gacttgcttt ttctgctctg agccggacgc cggaatggag
301 tttgaggaag agattcttcg ctgctgctgc cttaccgccg agaaccacca cccgccaggc
361 gtcttgcggc cacacccctg gcgggttcag gcaggctacg cccacgcgac ccctcccgtt
421 tccctgcttt ggccaatgga ggagctacga gtggcacgac ctgctcgagc ttggcagtct
481 ccagttgggc tgtgcatgga agcttgggaa gactttgttg gaaggggagg cggggagaga
541 gtgctggagg ctctggggcg atggcttccg cacctcttcc aaccaccctc tttccctgga
601 gtcggcggac cacagctcag ccaattggct tggagatgtg gcgggttgcc acttccctgt
661 gggtctctgc ggcactcttc tgcctggtga ctgacacctt ggaaatgaag tttatgacgt
721 catcgttgcg gctggccaat agaaaaagct cccgcggaga ggtgttcctt ccccttcgac
781 tcagcttctt cacccgcgtg agcgagcgcg cgcgcgcgga gggggtgggg aaaatctcaa
841 gcagggtggc gcgcatgagc ggcgaagctc ctcctccccg cctatatata aagggctggc
901 gcggggctcg gcggcgccat ttcgtgctgg agtggagcag cctctagaac gagctggagg
961 attctgccta ccgatacaga gccttcgagt cgtccggggc cgcattacaa tccacctcca
1021 tccgcttgga aatggccttc gtcccggcct atgactggtc ccagcgggca gtacagaccc
1081 cctagaagcc cctggagctc ccctttttcg ggccccgccc aatcctcgga gtctgtccac
1141 cccctctact ccgccctcaa gaggatttca aagatggagg cggcggctcc ctaaaccact
1201 tttcgtgttc atccgcctcc atccgagatc gaaacgggac ctcgtcggcc ccgtaggggc
1261 ccgacaagaa gagggaatcc ctgcagacca acagcgggct atattgacga cggtgtctga
1321 gatcggggac cgtcttttga agagtcagtc cctccttagt tgcccgcctc agctgaggcc
1381 gccgccattt tcttgctgtc cgccgtctgc agagcgcgcc aagctgcccg gagctctccg
1441 agaggcccca aagagactgc tttcgtgccg gccaggcagg gggtttgtcg cctggaggcc
1501 caagaggaac ggcctccccc caacttagcg ggttatgctg gaccgggcgg tgaggggaac
1561 cgaggccacc cggactttcc gcggctgagg gcagcgccgg ttccttgcgg tcaagatgct
1621 gcaaaacgtg actccccaca ataagctccc tggggaaggg aatgcagggt tgctggggct
1681 gggcccagaa gcagcagcac cagggaaaag gattcgaaaa ccctctctct tgtatgaggg
1741 ctttgagagc cccacaatgg cttcggtgcc tgctttgcaa cttacccctg ccaacccacc
1801 acccccggag gtgtccaatc ccaaaaagcc aggacgagtt accaaccagc tgcaatacct
1861 acacaaggta gtgatgaagg ctctgtggaa acatcagttc gcatggccat tccggcagcc
1921 tgtggatgct gtcaaactgg gtctaccgga ttatcacaaa attataaaac agcctatgga
1981 catgggtact attaagagga gacttgaaaa caattattat tgggctgctt cagagtgtat
2041 gcaagatttt aataccatgt tcaccaactg ttacatttac aacaagccca ctgatgatat
2101 tgtcctaatg gcacaaacgc tggaaaagat attcctacag aaggttgcat caatgccaca
2161 agaagaacaa gagctggtag tgaccatccc taagaacagc cacaagaagg gggccaagtt
2221 ggcagcgctc cagggcagtg ttaccagtgc ccatcaggtg cctgccgtct cttctgtgtc
2281 acacacagcc ctgtatactc ctccacctga gatacctacc actgtcctca acattcccca
2341 cccatcagtc atttcctctc cacttctcaa gtccttgcac tctgctggac ccccgctcct
2401 tgctgttact gcagctcctc cagcccagcc ccttgccaag aaaaaaggcg taaagcggaa
2461 agcagatact accaccccta cacctacagc catcttggct cctggttctc cagctagccc
2521 tcctgggagt cttgagccta aggcagcacg gcttccccct atgcgtagag agagtggtcg
2581 ccccatcaag cccccacgca aagacttgcc tgactctcag caacaacacc agagctctaa
2641 gaaaggtaag ctttcagaac agttaaaaca ttgcaatggc attttgaagg agttactctc
2701 taagaagcat gctgcctatg cttggccttt ctataaacca gtggatgctt ctgcacttgg
2761 cctgcatgac taccatgaca tcattaagca ccccatggac ctcagcactg tcaagcggaa
2821 gatggagaac cgtgattacc gggatgcaca ggagtttgct gctgatgtac ggcttatgtt
2881 ctccaactgc tataagtaca atcccccaga tcacgatgtt gtggcaatgg cacgaaagct
2941 acaggatgta tttgagttcc gttatgccaa gatgccagat gaaccactag aaccagggcc
3001 tttaccagtc tctactgcca tgccccctgg cttggccaaa tcgtcttcag agtcctccag
3061 tgaggaaagt agcagtgaga gctcctctga ggaagaggag gaggaagatg aggaggacga
3121 ggaggaagaa gagagtgaaa gctcagactc agaggaagaa agggctcatc gcttagcaga
3181 actacaggaa cagcttcggg cagtacatga acaactggct gctctgtccc agggtccaat
3241 atccaagccc aagaggaaaa gagagaaaaa agagaaaaag aagaaacgga aggcagagaa
3301 gcatcgaggc cgagctgggg ccgatgaaga tgacaagggg cctagggcac cccgcccacc
3361 tcaacctaag aagtccaaga aagcaagtgg cagtgggggt ggcagtgctg ctttaggccc
3421 ttccggcttt ggaccttctg gaggaagtgg caccaagctc cccaaaaagg ccacaaagac
3481 agccccacct gccctgccta caggttatga ttcagaggag gaggaagaga gcaggcccat
3541 gagttacgat gagaagcggc agctgagcct ggacatcaac aaattacctg gggagaagct
3601 gggccgagtt gtgcatataa tccaagccag ggagccctct ttacgtgatt caaacccaga
3661 agagattgag attgattttg aaacactcaa gccatccaca cttagagagc ttgagcgcta
3721 tgtcctttcc tgcctacgta agaaaccccg gaagccctac accattaaga agcctgtggg
3781 aaagacaaag gaggaactgg ctttggagaa aaagcgggaa ttagaaaagc ggttacaaga
3841 tgtcagcgga cagctcaatt ctactaaaaa gccccccaag aaagcgaatg agaaaacaga
3901 gtcatcctct gcacagcaag tagcagtgtc acgccttagc gcttccagct ccagctcaga
3961 ttccagctcc tcctcttcct cgtcgtcgtc ttcagacacc agtgattcag actcaggcta
4021 aggggtcagg ccagatgggg caggaaggct ccgcaggacc ggacccctag accaccctgc
4081 cccacctgcc ccttccccct ttgctgtgac acttcttcat ctcacccccc cctgcccccc
4141 tctaggagag ctggctctgc agtgggggag ggatgcaggg acatttactg aaggagggac
4201 atggacaaaa caacattgaa ttcccagccc cattggggag tgatctcttg gacacagagc
4261 ccccattcaa aatggggcag ggcaagggtg ggagtgtgca aagccctgat ctggagttac
4321 ctgaggccat agctgcccta ttcacttcta agggccctgt tttgagattg tttgttctaa
4381 tttattttaa gctaggtaag gctgggggga gggtggggcc gtggtcccct cagcctccat
4441 ggggagggaa gaagggggag ctcttttttt acgttgattt ttttttttct actctgtttt
4501 ccctttcctt ccgctccatt tggggccctg ggggtttcag tcatctcccc atttggtccc
4561 ctggactgtc tttgttgatt ctaacttgta aataaagaaa ttttttccaa aaaaaaaaaa
4621 aaaaa
//