LOCUS BX647553 3487 bp mRNA linear HTC 03-AUG-2004
DEFINITION Homo sapiens mRNA; cDNA DKFZp686J1497 (from clone DKFZp686J1497).
ACCESSION BX647553
VERSION BX647553.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3487)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (13-JUL-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp686J1497) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686J1497
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..3487
/db_xref="H-InvDB:HIT000056200"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686J1497"
/tissue_type="retina"
/note="protein tyrosine phosphatase 1E, N- and C-terminus
truncated, not fully spliced"
/db_xref="taxon:9606"
CDS join(<1254..1682,1684..>3468)
/codon_start=1
/gene="DKFZp686J1497"
/product="hypothetical protein"
/db_xref="H-InvDB:HIT000056200.14"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR036034"
/db_xref="UniProtKB/TrEMBL:Q6AWB9"
/protein_id="CAH10380.1"
/translation="ENTFEVKLFKNSSGLGFSFSREDNLIPEQINASIVRVKKLFPGQ
PAAESGKIDVGDVILKVNGASLKGLSQQEVISALRGTAPEVFLLLCRPPPGVLPEIDT
ALLSPLQSPAQVLPNSSKDSSQPSCVEQSTSSDENEMSDKSKKQCKSPSRRDSYSDSS
GSGENDLVTAPANISNSTWSSALHQTLSNMVSQAQSHHEAPKSQEDTICTMFYYPQKI
PNKPEFEDSNPSPLPPDMAPGQSYQPQSESASSSSMDKYHIHHISEPTRQENWTPLKN
DLENHLEDFELEVELLITLIKSEKGSLGFTVTKGNQRIGCYVHDVIQDPAKSDGRLKP
GDRLIKVNDTDVTNMTHTDAVNLLRAASKTVRLVIGRVLELPRIPMLPHLLPDITLTC
NKEELGFSLCGGHDSLYQVVYISDINPRSVAAIEGNLQLLDVIHYVNGVSTQGMTLEE
VNRALDMSLPSLVLKATRNDLPVVPSSKRSAVSAPKSTKGNGSYSVGSCSQPALTPND
SFSTVAGEEINEISYPKGKCSTYQIKGSPNLTLPKESYIQEDDIYDDSQEAEVIQSLL
DVVDEEAQNLLNENNAAGYSCGPGTLKMNGKLSEERTEDTDCDGSPLPEYFTEATKMN
GCEEYCEEKVKSESLIQKPQEKKTDDDEITWGNDELPIERTNHEDSDKDHSFLTNDEL
AVLPVVKVLPSGKYTGANLKSVIRVLRGLLDQGIPSKELENLQELKPLDQCLIGQT"
BASE COUNT 1082 a 716 c 667 g 1022 t
ORIGIN
1 atatttcctt tactttataa atgatggtga tggtgtacag tcattgtttt attttacaca
61 aacgttagca actctgaatc agtccccaaa ataatgagaa aaaataacac agactatatt
121 attttttcct gaatatgaaa ataaaattaa tgtactcatt ttatcatact gctctttatt
181 ctttatttct tccatctttt tttttttttt tttttgaaac agagtctcgt tctgttgccc
241 aggctggagt acagtggcgc aatcttggct cactgcaacc tccgcccctg ggttcaagct
301 attctcctgc ctcagcttcc tgagtagctg agattatagg cacacactgc cacatgcggc
361 taatttttgt atttttagta cagacggggt ttcaccatgt tggccaaact ggtcttgaac
421 tcctgacctc aggtgatccg ccctcctcag cctcccaaaa tgctgggatt acaggtgtga
481 gccaccacac ccagccccat cattctttct ttaaatagat ttttttttaa acacccaagc
541 caaccatgag caaagacttt aaatgtattt tttaattatt ttctggttat tgttctttta
601 atttatttag ctgataagaa atttattgaa atattgcaat ttatctgagt taaattacac
661 ctccccagaa cattacaatt tcaatttatt tccacataac ctcctctaac atttattttg
721 ttcttctttt catctttctc acgctgtata cctgagtttc tcccatacct gtccttctgt
781 ggagtttccc ctttttttgt ctgttatcgt actctgtttt gttttgtttt tgtagagatt
841 ggatctcact gtattgccca ggctggtctc aaactcctgg gttcaagcaa ccctcctact
901 tcggcctccc aaagtactgg ggtttatagg catgagccac tgtgcctgac catagtgtct
961 tttaaaacac acaagtttga tgcataattc cattttcaga atcctacttt cagaactctc
1021 cttcctaatc aaacagctta gttcatgcag ttagttgata agatttctta atgatggaaa
1081 taggctgtaa gatacagctt cagtatacca ttggagtgca gtaagtacat acagagctat
1141 aaatacggga aaatgggctt ttaaaatgtg tctagaagta tatatgtttg tatgttccta
1201 tgtaaacaca gcatgttaat aatatctaaa ttttttttat atctttttct ccagaaaata
1261 catttgaggt aaaattattt aaaaatagct caggtctagg attcagtttt tctcgagaag
1321 ataatcttat accggagcaa attaatgcca gcatagtaag ggttaaaaag ctctttcctg
1381 gacagccagc agcagaaagt ggaaaaattg atgtaggaga tgttatcttg aaagtgaatg
1441 gagcctcttt gaaaggacta tctcagcagg aagtcatatc tgctctcagg ggaactgctc
1501 cagaagtatt cttgcttctc tgcagacctc cacctggtgt gctaccggaa attgatactg
1561 cgcttttgtc cccacttcag tctccagcac aagtacttcc aaacagcagt aaagactctt
1621 ctcagccatc atgtgtggag caaagcacca gctcagatga aaatgaaatg tcagacaaaa
1681 gcaaaaaaac agtgcaagtc cccatccaga agagacagtt acagtgacag cagtgggagt
1741 ggagaaaatg acttagtgac agctccagca aacatatcaa attcgacctg gagttcagct
1801 ttgcatcaga ctctaagcaa catggtatca caggcacaga gtcatcatga agcacccaag
1861 agtcaagaag ataccatttg taccatgttt tactatcctc agaaaattcc caataaacca
1921 gagtttgagg acagtaatcc ttcccctcta ccaccggata tggctcctgg gcagagttat
1981 caaccccaat cagaatctgc ttcctctagt tcgatggata agtatcatat acatcacatt
2041 tctgaaccaa ctagacaaga aaactggaca cctttgaaaa atgacttgga aaatcacctt
2101 gaagactttg aactggaagt agaactcctc attaccctaa ttaaatcaga aaaaggaagc
2161 ctgggtttta cagtaaccaa aggcaatcag agaattggtt gttatgttca tgatgtcata
2221 caggatccag ccaaaagtga tggaaggcta aaacctgggg accggctcat aaaggttaat
2281 gatacagatg ttactaatat gactcataca gatgcagtta atctgctccg ggctgcatcc
2341 aaaacagtca gattagttat tggacgagtt ctagaattac ccagaatacc aatgttgcct
2401 catttgctac cggacataac actaacgtgc aacaaagagg agttgggttt ttccttatgt
2461 ggaggtcatg acagccttta tcaagtggta tatattagtg atattaatcc aaggtccgtc
2521 gcagccattg agggtaatct ccagctatta gatgtcatcc attatgtgaa cggagtcagc
2581 acacaaggaa tgaccttgga ggaagttaac agagcattag acatgtcact tccttcattg
2641 gtattgaaag caacaagaaa tgatcttcca gtggtcccca gctcaaagag gtctgctgtt
2701 tcagctccaa agtcaaccaa aggcaatggt tcctacagtg tggggtcttg cagccagcct
2761 gccctcactc ctaatgattc attctccacg gttgctgggg aagaaataaa tgaaatatcg
2821 taccccaaag gaaaatgttc tacttatcag ataaagggat caccaaactt gactctgccc
2881 aaagaatctt atatacaaga agatgacatt tatgatgatt cccaagaagc tgaagttatc
2941 cagtctctgc tggatgttgt ggatgaggaa gcccagaatc ttttaaacga aaataatgca
3001 gcaggatact cctgtggtcc aggtacatta aagatgaatg ggaagttatc agaagagaga
3061 acagaagata cagactgcga tggttcacct ttacctgagt attttactga ggccaccaaa
3121 atgaatggct gtgaagaata ttgtgaagaa aaagtaaaaa gtgaaagctt aattcagaag
3181 ccacaagaaa agaagactga tgatgatgaa ataacatggg gaaatgatga gttgccaata
3241 gagagaacaa accatgaaga ttctgataaa gatcattcct ttctgacaaa cgatgagctc
3301 gctgtactcc ctgtcgtcaa agtgcttccc tctggtaaat acacgggtgc caacttaaaa
3361 tcagtcattc gagtcctgcg gggtttgcta gatcaaggaa ttccttctaa ggagctggag
3421 aatcttcaag aattaaaacc tttggatcag tgtctaattg ggcaaactaa aaaaaaaaaa
3481 aaaaaaa
//