LOCUS BX641073 3839 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686H13226 (from clone DKFZp686H13226).
ACCESSION BX641073
VERSION BX641073.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3839)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (26-AUG-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686H13226) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3839
/db_xref="H-InvDB:HIT000055614"
/organism="Homo sapiens"
/map="10q11.21"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686H13226"
/tissue_type="human small intestine"
/db_xref="taxon:9606"
CDS <1412..2062
/codon_start=1
/gene="DKFZp686H13226"
/product="hypothetical protein"
/note="similar to beta-1,4-N-
acetylgalactosaminyltransferase, N-terminus truncated, not
fully spliced"
/db_xref="GOA:Q8N6G5"
/db_xref="H-InvDB:HIT000055614.15"
/db_xref="HGNC:HGNC:24292"
/db_xref="InterPro:IPR008428"
/db_xref="InterPro:IPR029044"
/db_xref="UniProtKB/Swiss-Prot:Q8N6G5"
/protein_id="CAE46036.1"
/translation="SESNFHNYTLVSLNEEFNRGRGLNVGARAWDKGEVLMFFCDVDI
YFSAEFLNSCRLNAEPGKKVFYPVVFSLYNPAIVYANQEVPPPVEQQLVHKKDSGFWR
DFGFGMTCQYRSDFLTIGGFDMEVKGWGGEDVHLYRKYLHGDLIVIRTPVSGLFHLWH
EKRCADELTPEQYRMCIQSKAMNEASHSHLGMLVFREEIETHLHKQAYRTNSEAVG"
regulatory 3793..3798
/regulatory_class="polyA_signal_sequence"
polyA_site 3818
BASE COUNT 1119 a 695 c 777 g 1248 t
ORIGIN
1 ttctgtgatc agtgcctcca cttgatgctg agtatgtggg gtggcaatgg gcagttttcc
61 cccaacagag gagagattta tattccttaa gacggggaga agagtcctag gcattcagag
121 cacttggagt ccactccatg cactatttga gcctttgttc catctctcca ttacccattc
181 tgtactgttg taagtgtaat cctcctaaaa tgttactttt ttgattaggc tgcaccctag
241 tgcagtgagt gattctccag cttcagtgcc agagtcacca ggaggacttg tgaaaatgta
301 gaggcttctc tccagcccta gcatctgatt cagtgggtct ggctgtagtc tgagagtttg
361 cttctctaac atgttaacac aggaagctga tgctgtgggt ttgggggcct cactgtgaga
421 accactgccc tagcagaaaa gtcctgctga ttctctttgc ctttaggata ctgaccaatt
481 tctttaacct tgcatgggag gtactcttca ctctgaccct tctctcattg ttcccatttt
541 aagattccgt tgacccttat ctcactgttc ccattttagg gtccttttct accaatctga
601 tttgtctgat cccttttctc taaaatgctt tctacattct tacctctttg cctttgagaa
661 taattatttt gaatgacctt tacactcacc actgaattca acattttaac caaggcataa
721 ctcacgttcc acttctaaca tcttctctaa ctactccaga catgagcgat gtatttttca
781 gaactgctgt tcattcattc attcagcaaa tatttattga actcctactc tatcagggga
841 cactgcatcc atagtaatga acaaaacaaa atccctgctc ccacagagtg ggagagacac
901 tggaacaaat atgtctagca atatgaagga aaatagctga ggaagaggat ggagatgaag
961 gagtgggagg tggcagctgc ttctcaagta gtattaggga ggatccctct gataaggcga
1021 catgtgtgca aagacctaac ggatgcaaga ggagagtgat ctttgtgtgt gttatccatt
1081 tagaatgcat tattaacaga cattacagct atttttccat ttgtgtattt ttcaactccc
1141 caaaaggtgt ttaagattcc aaaggtcagt ggccacttta acacttttgg agcctcatac
1201 caccaacatg tgcctcaaat tgggcatttg gtgaatatct ctccctgatg ataatcatac
1261 acatgaagct gggattttct ttccctttgt gaatgtagaa ccaatataat caaatatttg
1321 aagtgtaaaa catattttgt aagctgtgtt gaaggaagaa aattggtaac tttaagtggg
1381 acttatcatt tgttgtgtgt gctttcctca tagtgagtct aattttcaca attacacctt
1441 ggtctcattg aatgaagaat ttaatcgtgg acgaggacta aatgtgggtg cccgagcttg
1501 ggacaaggga gaggtcttga tgtttttctg tgatgttgat atctatttct cagccgaatt
1561 ccttaacagc tgccggttaa atgctgagcc aggtaagaag gtgttttacc ctgtggtgtt
1621 cagtctttac aatcctgcca ttgtttatgc caaccaggaa gtgccaccac ctgtggagca
1681 gcagctggtt cacaaaaagg attctggctt ttggcgagat tttggctttg gaatgacttg
1741 tcagtatcgt tcagacttcc tgaccattgg tggatttgac atggaagtga aaggttgggg
1801 tggagaagat gttcatcttt atcgaaaata cttacatggt gacctcattg tgattcggac
1861 tccggtttct ggtcttttcc acctctggca tgaaaagcgc tgtgctgatg agctgacccc
1921 cgagcagtac cgcatgtgca tccagtctaa agccatgaat gaggcctctc actcccacct
1981 gggaatgctg gtcttcaggg aggaaataga gacgcatctt cataaacagg catacaggac
2041 aaacagtgaa gctgttggtt gaaatcataa ttaatgcgtt actgtatgaa ccacaaaaca
2101 gcactattta tttagcctta cttctacttc cagatgcagt gcctcttttg gagaagacat
2161 gtttattttt catgtctttc tgacattact ttagcaatcc aacttgatgt gagaagaaaa
2221 aacaaatgtt tcaacacaaa atctctgttt tgtgagaata ctgcactatg gaataattga
2281 caaattgaaa tctcatattt gtcccaaaag ttgttttgag ttagttctac ctggtgccca
2341 tgttctgatt gtgtgtggga ttgcatggtg tcctgattgc atctaggtgg agcggatgga
2401 atgtgctggg ccactgttgg gtggagagca gcacattctt acagaggaga tggagcgtta
2461 tgagcatagt atgtggatag gtatcttcac ctgcccgccc ctgagtcagc ctccttgact
2521 tgatagcttg aagaatcctt ttccactgaa atagaggata attaattgac acatctgaaa
2581 tccccaatca atcaatcaag agaaaggtag aactaaaaac tccttaactt actgttgctt
2641 acacccctga aagtctgttt ttaagcaaat gggtaatagt agaaaatagg ttagaatcta
2701 tggcttgatt aaaaatatgt tattacatta tcatgttcag gattaggatt agtagtcagt
2761 tgctgtaaac tattttgaac aaacagaaaa gaacacggaa acatttttaa cagagcattt
2821 aattatgttg gaatacagga tcctagctct gtctgggaac attagtttat gtgagccagc
2881 tctatcaggg tcttcccatg gtggttcaga atagatgagc atagcatggt tttgtttgtt
2941 tttgctttca attttctaat ttggcatgga tccatatgta tttactatcc tttttctaat
3001 atattaatat atgctacatt tgtatttgca ttactataat actttgagtt gaaaaagagt
3061 ttcattgtgg agagaaaaag caaatggtat gccacaagat cactctgatt tgagaaaagg
3121 gaggagggga agatagtctg aatggaaatc tgaaatacgg aatgttttag agaaatatgt
3181 cacttgcata tagaatgttt taattgaggt ataaattaat gagacaaagt gaaaaagaaa
3241 ttatattcag ataggactgc actacattat ttgtcacaca tggatctgtt accatcaggt
3301 caattcctag tatgcataaa ttttttaacc cttttaaaag agacctatgt tgaaaacccc
3361 tgaaaattca ctgaagaaaa atcattactc tttttctcag taaatcatat catctgaaat
3421 attacaaatt tcaaatttct aggtgctata ttaattcaat attacaataa ctcttaccta
3481 attattctta caagttttaa gttgtggtag tttagtgatt tttttaaaag atgtgtgaaa
3541 tgttctctgc aaaataattc aggccactgt ctccttttat atattattat aattatttat
3601 tatgaagacc agtgaattac gatatttaaa gtgagagaac ttaattattt gcaaaggtaa
3661 gttacagctt gttttttgag agaatcaaat gagtttactt ctgttcctgt tgtttttaac
3721 tagctttaag tttaaagatg gaagctaagc aatggaaatg ctatacgttt ttgacattta
3781 ttaaatggta ccaataaagt attttattac caaaagttaa aaaaaaaaaa aaaaaaaaa
//