LOCUS BX641059 3378 bp mRNA linear HUM 21-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686F02202 (from clone DKFZp686F02202).
ACCESSION BX641059
VERSION BX641059.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3378)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (26-AUG-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686F02202) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3378
/db_xref="H-InvDB:HIT000055600"
/organism="Homo sapiens"
/map="Xq13"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686F02202"
/tissue_type="human fetal brain"
/db_xref="taxon:9606"
CDS 169..1224
/codon_start=1
/gene="DKFZp686F02202"
/product="hypothetical protein"
/note="neuroligin 3 isoform"
/db_xref="GOA:Q6MZK0"
/db_xref="H-InvDB:HIT000055600.12"
/db_xref="InterPro:IPR002018"
/db_xref="InterPro:IPR019819"
/db_xref="InterPro:IPR029058"
/db_xref="InterPro:IPR030024"
/db_xref="UniProtKB/TrEMBL:Q6MZK0"
/protein_id="CAE46030.1"
/translation="MLPVWFTANLDIVATYIQEPNEDCLYLNVYVPTEDGSGAKKQGE
DLADNDGDEDEDIRDSGAKPVMVYIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRV
GVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFGGDPRRITVFGSGIGASCVSLL
TLSHHSEGLFQRAIIQSGSALSSWAVNYQPVEYTSLLADKVGCNVLDTVDMVDCLRQK
SAKELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFLNYDIMLGVNQGEGLKF
VEGVVDPEDGVSGTDFDYSVSILWTICMAILRVRTPCERPSSSCIQTGQTVTTLRPAV
KHWWHSSLTTSGWSPQW"
polyA_site 3318
BASE COUNT 828 a 987 c 853 g 710 t
ORIGIN
1 gggtgcgcgg gcacagcagc caggctgccg gagagctgat ctcggggatt cgggtgcgga
61 gcccttggcc tggaggcgat atgggtggtc cgtggcccgg ttcagtcgct tgcagcagcc
121 cggggaacag tgtgccccca gaacatccac acagctgtgc ccgaagtcat gctgccggtc
181 tggttcactg ccaacttgga tatcgtcgct acttacatcc aggagcccaa cgaagactgt
241 ctctacctga acgtctatgt gccgacggag gatggatccg gcgctaagaa acagggcgag
301 gacttagcgg ataatgacgg ggatgaagat gaagacatcc gggacagtgg tgctaaaccc
361 gtcatggtct acatccacgg aggctcttac atggaaggga caggcaacat gatcgatggc
421 agcatcctcg ccagttatgg caatgtcatc gtcatcaccc tcaactatcg ggttggagtg
481 ctaggtttcc tgagtactgg agatcaggct gccaagggca actatgggct ccttgaccag
541 atccaggccc tccgctgggt gagcgagaat attgccttct tcgggggaga cccccgccgg
601 atcactgtct ttggctcggg cattggtgca tcctgcgtca gcctcctcac gttgtcacat
661 cactcagagg gacttttcca gagagccatc atccaaagtg gctctgctct gtccagctgg
721 gctgtgaact accaaccagt ggagtacacc agcctgctgg cagacaaagt gggctgtaat
781 gtgctggaca ccgtggatat ggtggactgt cttcggcaaa agagtgccaa ggagctggta
841 gagcaggaca tccagccagc ccgctaccac gtggcctttg gccctgtgat tgatggtgat
901 gtcattcctg atgaccctga gatcctcatg gagcagggcg agttcctcaa ctatgacatc
961 atgctaggtg tcaaccaggg cgagggtctc aagtttgtgg aaggggtggt ggaccctgag
1021 gatggtgtct ctggcactga ctttgactat tccgtctcaa ttttgtggac aatctgtatg
1081 gctatcctga gggtaaggac accctgcgag agaccatcaa gttcatgtat acagactggg
1141 cagaccgtga caaccctgag acccgccgta aaacactggt ggcactcttc actgaccacc
1201 agtgggtgga gccctcagtg gtgacagccg atctgcatgc ccgctacggc tcgcctacct
1261 acttctacgc cttctatcat cactgccaga gcctcatgaa gcctgcttgg tcagatgcag
1321 ctcatgggga tgaagtaccc tatgtttttg gggttcctat ggtaggcccc actgaccttt
1381 tcccctgcaa cttctccaag aatgatgtta tgctcagtgc tgtcgtcatg acctattgga
1441 ccaactttgc caagactggg gatcccaaca agccggtccc ccaggacacc aagttcattc
1501 acaccaaggc caaccgcttt gaggaagtgg cctggtccaa atacaatccc cgagaccagc
1561 tctaccttca catcgggctg aaaccaaggg tccgagatca ttaccgggcc actaaggtgg
1621 cccttttgga aacatctggt gccccaccta tacaacctgc atgacatgtt ccactatacg
1681 tccaccacca ccaaagtgcc gcctccggat accacccaca gctcccacat cacccgcagg
1741 cccaatggca agacctggag caccaagcgg ccagccatct cacctgccta cagcaacgag
1801 aatgcccagg ggtcctggaa cggggaccag gatgcagggc cactcctggt ggagaaccct
1861 cgtgactact ccactgaatt aagtgtcacc atcgccgtgg gggcctccct cctgttcctt
1921 aacgttctgg ccttcgctgc cctctactac cgtaaggaca aacggcgcca ggagcccctg
1981 cggcagccta gccctcagcg gggagccggg gccccggagt tgggagctgc tccagaggag
2041 gagctggcag cattacaact gggccccacc caccacgagt gtgaggccgg tcccccccat
2101 gacacgctgc gcctcactgc attgcccgac tacaccctga ccctgcggcg ctccccggat
2161 gacatcccac tcatgacccc caacaccatc actatgatcc ccaactccct ggtagggctg
2221 cagacattgc acccctataa cacctttgcc gcagggttca acagtaccgg gctgccccac
2281 tcacactcca ctacccgggt atagctccaa ctcagagcac agccaatctc caggctccct
2341 ccctcccaga tccaggaaca catgcacaca cacacacaca cacacgcaga cacacacaca
2401 cacacacata tatgtatacg cacgcaccca caccctacag cagatccacc tgcacaaaca
2461 tagacagatg tggacatgca cccgcatgta caaaaacaca aatacggaag taaacctgaa
2521 caaacccttt aaatggggac gcagatgagt cctcggtaaa ccgaggaccc atgaaacagc
2581 agctgaagcc agctccctga atctgaccac agacactcct ggggggcctg aaagcaacag
2641 ctggacaccc ccttggtgct cgccttcggc ctctcttgga actgcaccac cgaccaactc
2701 cagacttggg agctttaaag agcaggatag ctcttcctcc ccaggacttg gtcttttttc
2761 tgggtcttgt tttgttgatt tttctttttt aattttggaa caaatgcttt tccaacccat
2821 gagtgctaag agcctctgga agggagggct tcaggcccga aggtctctct ggctctagga
2881 cccccagtgc tcacacaatc agaccaaaga acaagacccc caggaaggaa acagatttaa
2941 acaagaccat ggggtggaag gagaaagggg ctagcactgg atggagctgg agggtcgtag
3001 gggagagatc tccaactctc tctgtgtccg tgtggagggc tgcagagcct gcagggtgac
3061 ctgcttcccc aaaggccaac agcattggcc tggccagacc aggtgacctt agatttggtg
3121 aacaacgtac tatggaagcc acatcactat tgggccccca ggtctgatct gggttttgcc
3181 tctgcccttg gggaaatgct atcagaaatt cgccccattt tctttacagt cttttgtgtc
3241 tgtcatttct ctttcaaaaa ggcggtgttt tttgttgttg ttggtttttt ttttttttta
3301 aagaaaagtt cttaaaacac taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3361 aaaaaaaaaa aaaaaaaa
//