LOCUS BX641054 4399 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686I2330 (from clone DKFZp686I2330).
ACCESSION BX641054
VERSION BX641054.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4399)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (26-AUG-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686I2330) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4399
/db_xref="H-InvDB:HIT000055596"
/organism="Homo sapiens"
/map="1q32.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686I2330"
/tissue_type="human testis"
/db_xref="taxon:9606"
CDS join(874..2070,2072..2416)
/codon_start=1
/gene="DKFZp686I2330"
/product="hypothetical protein"
/note="hypothetical protein"
/note="The frame shift was determined manually"
/db_xref="GOA:Q8IVJ1"
/db_xref="H-InvDB:HIT000055596.15"
/db_xref="HGNC:HGNC:19429"
/db_xref="InterPro:IPR006667"
/db_xref="InterPro:IPR036739"
/db_xref="UniProtKB/Swiss-Prot:Q8IVJ1"
/protein_id="CAE46028.1"
/translation="MSSKPEPKDVHQLNGTGPSASPCSSDGPGREPLAGTSEFLGPDG
AGVEVVIESRANAKGVREEDALLENGSQSNESDDVSTDRGPAPPSPLKETSFSIGLQV
LFPFLLAGFGTVAAGMVLDIVQHWEVFQKVTEVFILVPALLGLKGNLEMTLASRLSTA
ANIGHMDTPKELWRMITGNMALIQVQATVVGFLASIAAVVFGWIPDGHFSIPHAFLLC
ASSVATAFIASLVLGMIMIGVIIGSRKIGINPDNVATPIAASLGDLITLALLSGISWG
LYLELNHWRYIYPLVCAFFVALLPVWVVLARRSPATREVLYSGWEPVIIAMAISSVGG
LILDKTVSDPNFAGMAVFTPVINGVGGNLVTVQASRISTFLHMNGMPGENSEQAPRRC
PSPCTTFFSPDVNSRSARVLFLLVVPGHLVFLYTISCMQGGHTTLTLIFIIFYMTAAL
LQVLILLYIADWMVHWMWGRGLDPDNFSIPYLTALGDLLGTGLLALSFHVLWLIGDRD
TDVGD"
polyA_site 4387
BASE COUNT 939 a 1211 c 1117 g 1132 t
ORIGIN
1 ggcgtggaag cggagcggcg gcctcgctgt aacgcagaag cgaaatgtag cgagccgggt
61 gtcgcggctg gacgctcgcc ttggctgggg gtgtgggggg gcacgccggg ggccaaggag
121 gactgtcgag gaggagtgat gagaagaggg ggtgccctgc accccccgag accacgggcc
181 acgctgccac ttgccaggcg ccccccttcc tcccaggcga ggggcaggtg ttccacactg
241 attctcgtga ctttaaggac cagggatttg aagaggtatt agctcttccc aggaagggag
301 gaagtttctg gaagagaagg gaaagacggc agacgctgcg ctgggaccag cagagcctga
361 ggagctgtgg gaagctgaca gagcccagcc aaaggagcgg gaaggagccg cagccccagg
421 ctggcactgt gttctgaaag atttgaactc aagctgcttt ttacggaaga ggggccactt
481 cagagggcac cccagaattt ggttgagctc ttctactctg gatgccccct gctctgagga
541 gcctgccact gagaaccaaa gaagataaga ggacagatac tttttcttca agcacagagc
601 tggtgggttg gagtcaggca tctgcacccc tagtggctgt ctggtgagga atttcttgtt
661 tcttcccagc ttgcggcttc agtgcttgat ggggctgcct gttggtggat cagtttttgc
721 agtgcctggt aggagtggag agccgtggga agaggtcctg cggcgcccaa gcctgggttc
781 accccaagac taagttcttt cccaagttag agaagaagag agaaagcaaa aagaagagag
841 gaaagttctc ccttcccctc ctccgtgcct gtcatgtcct ctaagccaga gccgaaggac
901 gtccaccaac tgaacgggac tggcccttct gcctctccct gctcttcaga tggcccaggg
961 agagagccct tggctgggac ctcagagttc ctggggcctg atggggctgg ggtagaggtg
1021 gtgattgagt ctcgggccaa cgccaagggg gttcgggagg aggacgccct gctggagaac
1081 gggagccaga gcaacgaaag tgacgacgtc agcacagacc gtggccctgc gccaccttcc
1141 ccgctcaagg agacctcctt ttccatcggg ctgcaagtac tgttcccatt cctcctggca
1201 ggctttggga ccgtggctgc tggcatggtg ttggacatcg tgcagcactg ggaagtcttc
1261 cagaaggtga cagaggtctt catcctagtg cctgcgctgc tggggctcaa agggaacctg
1321 gaaatgaccc tggcatcaag gctttccact gcagccaaca ttggacacat ggacacaccc
1381 aaggagctct ggcggatgat cactgggaac atggccctca tccaggtgca ggccacggtg
1441 gtgggcttcc tggcgtccat cgcagccgtc gtctttggct ggatccctga tggccacttc
1501 agtattccgc acgccttcct gctctgtgct agcagcgtgg ccacagcctt cattgcctcc
1561 ctggtactgg gtatgatcat gattggagtc atcattggct ctcgcaagat tgggatcaac
1621 ccagacaatg tggccacacc cattgctgcc agcctgggcg acctcatcac cttggcgctg
1681 ctctcaggca tcagctgggg actctacctg gaactgaatc actggcgata catctaccca
1741 ctggtgtgtg ctttctttgt ggccctgctg cctgtctggg tggtgctggc ccgacgaagt
1801 ccagccacaa gggaggtgtt gtactcgggc tgggagcctg ttatcattgc catggccatc
1861 agcagtgtgg gaggcctcat cttggacaag actgtctcag accccaactt tgctgggatg
1921 gctgtcttca cgcctgtgat taatggtgtt gggggcaatc tggtgacagt gcaggccagc
1981 cgcatctcca ccttcctgca catgaatgga atgcccggag agaactctga gcaagctcct
2041 cgccgctgtc ccagtccttg taccaccttt cttcagccct gatgtgaatt ctcgctcagc
2101 ccgggtcctc ttcctcctcg tggtcccagg acacctggtg ttcctctaca ccatcagctg
2161 tatgcagggc gggcacacca ccctcacact catcttcatc atcttctata tgacagctgc
2221 actgctccag gtgctgattc tcctgtacat cgcagactgg atggtgcact ggatgtgggg
2281 ccggggcctg gacccggaca acttctccat cccatacttg actgctctgg gggacctgct
2341 tggcactggg ctcctagcac tcagcttcca tgttctctgg ctcatagggg accgagacac
2401 ggatgtcggg gactagcttg gtcactcaac attttcccca tccctctgca ctttctattt
2461 gaaatttttc ttttgttccc ctgtccctcc tccaccccac actcccacct ctttctagga
2521 cttcactttg ataccaaatt ctcattattt tcaatgggaa tttttataca ttgagccaag
2581 tttgtatagc aagaatttgg gaaacacaga tggcctgaga taagcagtac aagtaggttt
2641 ttgagacaat caccaagtgc agtttcatgg tgggtgcctc caggtgatgt ggactggagc
2701 aggggagttt tgtctggaat ctggggacat ggggtttggc tttagcaacc tgtcttggcc
2761 ctaatgagaa accctttgta agtgggctct ggatttttgg ttttgttttc tttttatctg
2821 ttttgtttta tttttggttt tggttgaaca gagggacaga agaataagta acactcccaa
2881 acacagacat acttttgtag aagtggacca acttcaaagc tctggacagg agacacctgc
2941 tccaggcccc tgtgatccca gttctgttct cttgccctct ggacctaagc gttcccactc
3001 gcagaaagag taaggtggac tgacttttca atttgtgcac atgcctcttg ttcaatggcc
3061 tggtcaacat caacaacccc tccctctgat catttccagt tgattgtcat atccaggaaa
3121 aaaatggaac agtgcactct tctccctgtt gacccatgtc cacctattgg ttccccaaaa
3181 tccacattct ccctgggccc agatgacttt gtctccctgg gcccagattc tttgtctctc
3241 ttcaaccttc atctcaaatt gtctctaagc actaccttcc ccagagcttg ccaggttggg
3301 ttttgagatt agggtcaggt catgggtatg tggagaatgg tttggaggtt gaggacaacc
3361 acaggtgtct cattgctgcc atttctcctg aggacataat cacttggtca ccttggaccc
3421 tgtcacttcc taaaattact cgttctgtca tgccatagag gtcagttttc ctctttcttg
3481 gcttctaccc acaaacattc accaatcatt tattcgttca tttagcaaat atgcagcctc
3541 cgcaagatga gctctcctgc agacaagcat ggtctgaaac attctttgag caatatttat
3601 tgagtgccta ctatgtgtta ggtactgtgc caggcactga taagccagtg gtaagggaaa
3661 cacagctcta acctcacctc attctccagg ttacaaaggc catgtgcccc tttgaatctg
3721 gcagagaaag tttcctcgtt gtaagtattt gcatctactt caagccagat tcttctgcct
3781 ctttctcctt tccagacccc tactctgtgc agtgctgacc acagctagag ccaccgcccc
3841 attgctcaac cagtatttat ttccctaaac gacccttcct catattccct tccctccacc
3901 tctccttacc aagcacccaa aagaggattt agaactagca gggtggacat catctggttg
3961 tttctacttt tctctgccta gcacaaaatt gggagaaaac tggagcctcc atccgcagtc
4021 acacgtgtac agatctgggg atttggatgt aggctttttc taacttctct ctcagaagct
4081 tctacagaaa cccttccatc tgtagcctca agggcccacc tccaagggaa ggcttaggca
4141 atgatcctgt ttctaccaac actgcacctt atcccaggaa cctgccctag acctccagag
4201 accatatttt ctctccctcc atttctaccc agacctccag gcctccttct ggaatcatag
4261 aaccgtagaa ttggaaggaa ttttagaggt tttctagttg gagttgtgtc caacagaatt
4321 cattaacacc agcctgggct tgtttttcct cctccctctg gacttttttc atcttctccc
4381 ccacctcaaa aaaaaaaaa
//