LOCUS BX641011 3984 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686C01233 (from clone DKFZp686C01233).
ACCESSION BX641011
VERSION BX641011.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3984)
AUTHORS Lauber J., Bahr A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (26-AUG-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686C01233) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3984
/db_xref="H-InvDB:HIT000055554_03"
/organism="Homo sapiens"
/map="5q13.2"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686C01233"
/tissue_type="human small intestine"
/db_xref="taxon:9606"
CDS <1..789
/codon_start=1
/gene="DKFZp686C01233"
/product="hypothetical protein"
/note="hypothetical protein, N-terminus truncated,
differentially spliced"
/db_xref="GOA:A6H8Y1"
/db_xref="H-InvDB:HIT000055554_03.4"
/db_xref="HGNC:HGNC:13652"
/db_xref="InterPro:IPR001005"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR039467"
/db_xref="PDB:5N9G"
/db_xref="UniProtKB/Swiss-Prot:A6H8Y1"
/protein_id="CAE46010.1"
/translation="VNTEERGDMSICLPATSVGQDAMGLSISGRDNSKKPPDNLDLVS
RKRFQCRLDKNDHIPPAKKRSLTLRDDCQEYTTEVHSKELTNVFEETGESHKGQDIFL
TSGSTLTTPEPQRQQVEAAFQSRGSRSPDACMDKNVPQLPQDEMIVSDKEERTDAAPK
SQQMDSRTSSSKASLSRPGRRPLGFLSLICSKNSLESDEPMQVHSKKRLKPLIPGLRK
KLKRSNPFNESQEKNRESSDLLPSPSVITTQSENISSSAAQRPF"
regulatory 3946..3951
/regulatory_class="polyA_signal_sequence"
polyA_site 3962
BASE COUNT 1290 a 629 c 710 g 1355 t
ORIGIN
1 gtgaataccg aagaaagggg tgacatgagt atttgtttac cagcaacttc agttggtcaa
61 gatgccatgg gtttatctat ttctggaaga gataattcta aaaagccgcc tgataatttg
121 gatcttgtat ctaggaagag atttcaatgc aggcttgata aaaatgacca cattcctcct
181 gccaaaaaac gttcactcac tttaagagat gactgtcaag aatataccac tgaggtgcac
241 tcaaaggaat taacaaatgt ttttgaggaa acaggggagt ctcacaaggg acaagatatt
301 tttcttacct caggaagcac actgacaact ccagaacctc aaagacagca agttgaagca
361 gcttttcaga gtagaggatc tagatctcct gatgcatgca tggacaagaa tgtgcctcag
421 ttacctcagg atgaaatgat tgtgtctgat aaggaagaaa gaactgatgc tgctcctaag
481 tctcagcaaa tggatagcag aacatcgtct tctaaagcct cactatccag acctggcaga
541 agacccctgg gatttttatc tttaatatgc tcaaagaata gtttggagtc tgatgaacct
601 atgcaagtcc atagtaagaa acgtctaaaa cctcttatac ctggattaag aaagaaattg
661 aaaagatcta atccattcaa tgaaagccag gaaaaaaatc gagagtcctc tgatctgctt
721 ccatctccaa gtgttattac tactcaatct gagaatatta gcagctcagc agctcagaga
781 cccttctgac ttgtggaagc aaaaggaagc agtgctgaca cccacaagaa tttaaggaac
841 tgtaaaacta gaatttgttc acatgtttca tttctatgtc tcctgaagct gtccaatggt
901 ttcttgtgat cagcccttac tgaaagaagg atataaaagt gcccaaaagc gggcccctca
961 aggggaggca accacagtct ctgaatattt cttcaatgat atcttcattg aagtggatga
1021 aacagaataa aacaatcttt tctctttttc ttttttaaat taggtctagg atttccagag
1081 tcaattacat caacaaaaca gtatttagag caaaatatca ctgtcttatt tttctttagg
1141 ttgattttga atacttaatg agcttgattt gaagctttta taatcagtgg aaaacatttc
1201 tgaggttcct ttcattctga ctgattcagc attttgcaaa tagcaagcaa ttaagactgc
1261 tttctcagac agaaataaca actcttgttt acattttgac tcttcctgtg ctaagcacac
1321 atggacattt gggaatgttg tggatatatg tctctgtatg aattgcagtg cagacagatt
1381 tgggggttaa ttgtatcata tttaacattt agcaacttct tttgtgaaga ttttttattt
1441 ttagggggag atgatgaagg atgaaggctt tttcatttgc ttctaagtac agtcatgtat
1501 cacataatga agtttaagtc aatgatggac cacatatatt acagtggtcc catgcaatta
1561 aaatggagat aaattcctat caactagtga cattatagcc atcataacac agtgcattgc
1621 tttttttatg tttagatatg tttagataca caaatactta ctattgtgtt acaactgcct
1681 acagtattca gcatagtaac acattgtaga ggtttgtagc cgaggagcaa taggctatac
1741 cacatagcct cagtctgtac ggtgtgtagc agcctgtacc atctcagtgt ttgtaagtac
1801 actctgcgtt gtttcacaca agatcaccta acaaggcaat tcttagaaca tgtagttaag
1861 ggacacgtga ctatatgtga aaacaaattg tcaaacttca ctttagtatg gcaaatgtta
1921 aagaactttt ctattatcag ctgtttgtct gactgaaaaa tacatatttt tctaattcat
1981 ggtgatgtaa cattagtcct aattgaaaaa ctagtattta aacataatta tttataaaga
2041 tgacacatca aagggcttat ttatttttaa attttttatt taaaaggata ttcagtttta
2101 gctattttta cccctcagat tgtagataaa gaaggcatta aatttatgtt tgtctccttt
2161 ttctgtttaa ttttaaagat atttaaaatg atataactaa aaatgtttag ctggtgtata
2221 tgttttgaat acctttttcc cctcagttta gtatattgac tttgtactgt aaatttttct
2281 gcttttcttg gataatctca ggattttcat gaggataggg ggaactcaac tttatttatg
2341 agacaaaatt tccatacaaa gctcaatctc ctttatacac ccacagacat aatattagtt
2401 tttaaaaagc caatttcttc atagtttttt cccattaaat tctcaaggaa cacttggatc
2461 tttaagcacg gaacataatc atgatgttaa aaacagagaa aataaggctt tataaagtta
2521 atgattatca tcagtatgaa tttaaggttt gttttaattt caagatttga ttttttatac
2581 gtgtaattct attatctacc caagcagatc tgtagtggtt ccaattagac ttctcaaaca
2641 gcaaatttat cctgatttta tttgaaaagc ctcttggatt gatagtatag tagctcaggc
2701 attggaaact ttctgcaaac tgttttgggt ttgcaggcca gatggtctct gtggcagcta
2761 ctcagctctg caatttcagt gtgaaagaag ccatagacag tacttgaatg aaggactgtg
2821 gctggattgg ccttttagtt tgacccccta cattaggccc caaattttct taccctgagg
2881 tgctgatatc tgtatggatg agttatttgt cactaaagtt atgagttgtg cctaaaagtt
2941 aaaactgttg actgtattat gtaatgatca gtatttcagt tgggaagata ttttagagtc
3001 tagataatta tgtttgtata ttgaaaaaat ggtggccagt ttttaagttc cttaatagaa
3061 gagaattatg tctcagcaca tataacagta atgctaattt attgaaacta ctgctgttag
3121 agcacttctt attcattgtc ttttagtgaa atttatggcg taacactttg tcagagagga
3181 ggctatataa ttcggagcgg aaattgtcta taagtaggca tttatttcat gattgatatg
3241 tcacagaaat catggtagta aatcacattg ctatttgaat accctgtttt tgtaagtttt
3301 taaaactcat attctgaaaa gatttcattc tcttagtgtt agcttgggag ttagattgcc
3361 atgattaaac tattatttat ccttgtgtaa tattagtttt taactttaac atctgtttct
3421 ttttaatcta taatgagcta gttttatgga aaatggaatt tcttactata taaagaatac
3481 agagactcat tgtattagag aatcaagtca gccagctaaa gtatcctact gttaaatcct
3541 taaacctaat tttggaaaag agaaagttaa tcaatgtatt taccttacat gttggaaaga
3601 actatgttag gtctgattca tgtgaagaag atgttgcaaa ggatttattt cacaaatttt
3661 aaaggagata tgagtaaaag tttttatctt ttcttgactt tttctcctga acacttatgt
3721 cttagcaagt ggtcaacatg aggatttgaa cgcctaattg ttggtaaatg gttgaggcat
3781 gacaaaaata ttaatatcca ctgtttacca tcatgttatt tgaaacaaaa gtgaccatgt
3841 atactatctt gcttgaagaa gtctttgaca gaaaaagcaa tatcatgtca tttataaatt
3901 ttcttgttct aaagaaagca gttatatata tatataaatt atgtaaataa aagttatttt
3961 atatcaaaaa aaaaaaaaaa aaaa
//