LOCUS BX640891 3151 bp mRNA linear HTC 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686D04248 (from clone DKFZp686D04248).
ACCESSION BX640891
VERSION BX640891.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3151)
AUTHORS Ottenwaelder B., Obermaier B., Deutschenbaur S., Schaipp A.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Medigenomix (Martinsried/Germany) within the cDNA
sequencing
consortium of the German Genome Project.
This clone (DKFZp686D04248) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686D04248
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..3151
/db_xref="H-InvDB:HIT000055437"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686D04248"
/tissue_type="salivary gland"
/note="Semaphorin B, differentially spliced, alternative
start"
/db_xref="taxon:9606"
CDS 217..2388
/codon_start=1
/gene="DKFZp686D04248"
/product="hypothetical protein"
/db_xref="GOA:Q6MZT6"
/db_xref="H-InvDB:HIT000055437.14"
/db_xref="InterPro:IPR001627"
/db_xref="InterPro:IPR002165"
/db_xref="InterPro:IPR015943"
/db_xref="InterPro:IPR016201"
/db_xref="InterPro:IPR027231"
/db_xref="InterPro:IPR036352"
/db_xref="UniProtKB/TrEMBL:Q6MZT6"
/protein_id="CAE45942.1"
/translation="MPRVRYYAGDERRALSFFHQKGLQDFDTLLLSGDGNTLYVGARE
AILALDIQDPGVPRLKNMIPWPASDRKKSECAFKKKSNETQCFNFIRVLVSYNVTHLY
TCGTFAFSPACTFIELQDSYLLPISEDKVMEGKGQSPFDPAHKHTAVLVDGMLYSGTM
NNFLGSEPILMRTLGSQPVLKTDNFLRWLHHDASFVAAIPSTQVVYFFFEETASEFDF
FERLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLLCTQPGQLPFNVIRHAVLLPADS
PTAPHIYAVFTSQWQVGGTRSSAVCAFSLLDIERVFKGKYKELNKETSRWTTYRGPET
NPRPGSCSVGPSSDKALTFMKDHFLMDEQVVGTPLLVKSGVEYTRLAVETAQGLDGHS
HLVMYLGTTPGSLHKAVVSGDSSAHLVEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGG
VWRVPRANCSVYESCVDCVLARDPHCAWDPESRTCCLLSAPNLNSWKQDMERGNPEWA
CASGPMSRSLRPQSRPQIIKEVLAVPNSILELPCPHLSALASYYWSHGPAAVPEASST
VYNGSLLLIVQDGVGGLYQCWATENGFSYPVISYWVDSQDQTLALDPELAGIPREHVK
VPLTRVSGGAALAAQQSYWPHFVTVTVLFALVLSGALIILVASPLRALRARGKVQGCE
TLRPGEKAPLSREQHLQSPKECRTSASDVDADNNCLGTEVA"
BASE COUNT 661 a 962 c 814 g 714 t
ORIGIN
1 agtgctggct ttggcatgat gggcacctgg agggccgcac tcccgttcca gccaggctga
61 gccttctgtc ccctgcctct ggggcctggg aacccccctt cttctttctc ctgaatggca
121 cccccgccct agaatccaga caccgagttt cccactgtgg ctggttcaag ggtatgtgag
181 agctccctgg tgacagtctg tggctgagca tggcccatgc ccagggtcag atactatgca
241 ggggatgaac gtagggcact tagcttcttc caccagaagg gcctccagga ttttgacact
301 ctgctcctga gtggtgatgg aaatactctc tacgtggggg ctcgagaagc cattctggcc
361 ttggatatcc aggatccagg ggtccccagg ctaaagaaca tgataccgtg gccagccagt
421 gacagaaaaa agagtgaatg tgcctttaag aagaagagca atgagacaca gtgtttcaac
481 ttcatccgtg tcctggtttc ttacaatgtc acccatctct acacctgcgg caccttcgcc
541 ttcagccctg cttgtacctt cattgaactt caagattcct acctgttgcc catctcggag
601 gacaaggtca tggagggaaa aggccaaagc ccctttgacc ccgctcacaa gcatacggct
661 gtcttggtgg atgggatgct ctattctggt actatgaaca acttcctggg cagtgagccc
721 atcctgatgc gcacactggg atcccagcct gtcctcaaga ccgacaactt cctccgctgg
781 ctgcatcatg acgcctcctt tgtggcagcc atcccttcga cccaggtcgt ctacttcttc
841 ttcgaggaga cagccagcga gtttgacttc tttgagaggc tccacacatc gcgggtggct
901 agagtctgca agaatgacgt gggcggcgaa aagctgctgc agaagaagtg gaccaccttc
961 ctgaaggccc agctgctctg cacccagccg gggcagctgc ccttcaacgt catccgccac
1021 gcggtcctgc tccccgccga ttctcccaca gctccccaca tctacgcagt cttcacctcc
1081 cagtggcagg ttggcgggac caggagctct gcggtttgtg ccttctctct cttggacatt
1141 gaacgtgtct ttaaggggaa atacaaagag ttgaacaaag aaacttcacg ctggactact
1201 tataggggcc ctgagaccaa cccccggcca ggcagttgct cagtgggccc ctcctctgat
1261 aaggccctga ccttcatgaa ggaccatttc ctgatggatg agcaagtggt ggggacgccc
1321 ctgctggtga aatctggcgt ggagtataca cggcttgcag tggagacagc ccagggcctt
1381 gatgggcaca gccatcttgt catgtacctg ggaaccaccc cagggtcgct ccacaaggct
1441 gtggtaagtg gggacagcag tgctcatctg gtggaagaga ttcagctgtt ccctgaccct
1501 gaacctgttc gcaacctgca gctggccccc acccagggtg cagtgtttgt aggcttctca
1561 ggaggtgtct ggagggtgcc ccgagccaac tgtagtgtct atgagagctg tgtggactgt
1621 gtccttgccc gggaccccca ctgtgcctgg gaccctgagt cccgaacctg ttgcctcctg
1681 tctgccccca acctgaactc ctggaagcag gacatggagc gggggaaccc agagtgggca
1741 tgtgccagtg gccccatgag caggagcctt cggcctcaga gccgcccgca aatcattaaa
1801 gaagtcctgg ctgtccctaa ctccatcctg gagctcccct gcccccacct gtcagccttg
1861 gcctcttatt attggagtca tggcccagca gcagtcccag aagcctcttc cactgtctac
1921 aatggctccc tcttgctgat agtgcaggat ggagttgggg gtctctacca gtgctgggca
1981 actgagaatg gcttttcata ccctgtgatc tcctactggg tggacagcca ggaccagacc
2041 ctggccctgg atcctgaact ggcaggcatc ccccgggagc atgtgaaggt cccgttgacc
2101 agggtcagtg gtggggccgc cctggctgcc cagcagtcct actggcccca ctttgtcact
2161 gtcactgtcc tctttgcctt agtgctttca ggagccctca tcatcctcgt ggcctcccca
2221 ttgagagcac tccgggctcg gggcaaggtt cagggctgtg agaccctgcg ccctggggag
2281 aaggccccgt taagcagaga gcaacacctc cagtctccca aggaatgcag gacctctgcc
2341 agtgatgtgg acgctgacaa caactgccta ggcactgagg tagcttaaac tctaggcaca
2401 ggccggggct gcggtgcagg cacctggcca tgctggctgg gcggcccaag cacagccctg
2461 actaggatga cagcagcaca aaagaccacc tttctcccct gagaggagct tctgctactc
2521 tgcatcactg atgacactca gcagggtgat gcacagcagt ctgcctcccc tatgggactc
2581 ccttctacca agcacatgag ctctctaaca gggtgggggc tacccccaga cctgctccta
2641 cactgatatt gaagaacctg gagaggatcc ttcagttctg gccattccag ggaccctcca
2701 gaaacacagt gtttcaagag accctaaaaa acctgcctgt cccaggaccc tatggtaatg
2761 aacaccaaac atctaaacaa tcatatgcta acatgccact cctggaaact ccactctgaa
2821 gctgccgctt tggacaccaa cactcccttc tcccagggtc atgcagggat ctgctccctc
2881 ctgcttccct taccagtcgt gcaccgctga ctcccaggaa gtctttcctg aagtctgacc
2941 acctttcttc ttgcttcagt tggggcagac tctgatccct tctgccctgg cagaatggca
3001 ggggtaatct gagccttctt cactccttta ccctagctga ccccttcacc tctccccctc
3061 ccttttcctt tgttttggga ttcagaaaac tgcttgtcag agactgttta ttttttatta
3121 aaaatataag gcttaaaaaa aaaaaaaaaa a
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