LOCUS BX640869 4596 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686H2266 (from clone DKFZp686H2266);
complete cds.
ACCESSION BX640869
VERSION BX640869.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4596)
AUTHORS Bloecker H., Boecher M., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (26-AUG-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology
Ltd., Braunschweig/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686H2266) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4596
/db_xref="H-InvDB:HIT000055415"
/organism="Homo sapiens"
/map="6q16.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686H2266"
/tissue_type="human endometrium carcinoma cell line"
/db_xref="taxon:9606"
CDS 142..1530
/codon_start=1
/gene="DKFZp686H2266"
/product="hypothetical protein"
/note="mandaselin, differentially spliced"
/db_xref="GOA:Q5SRI9"
/db_xref="H-InvDB:HIT000055415.15"
/db_xref="HGNC:HGNC:21072"
/db_xref="InterPro:IPR017853"
/db_xref="InterPro:IPR026071"
/db_xref="UniProtKB/Swiss-Prot:Q5SRI9"
/protein_id="CAE45927.1"
/translation="MAKFRRRTCIILALFILFIFSLMMGLKMLRPNTATFGAPFGLDL
LPELHQRTIHLGKNFDFQKSDRINSETNTKNLKSVEITMKPSKASELNLDELPPLNNY
LHVFYYSWYGNPQFDGKYIHWNHPVLEHWDPRIAKNYPQGRHNPPDDIGSSFYPELGS
YSSRDPSVIETHMRQMRSASIGVLALSWYPPDVNDENGEPTDNLVPTILDKAHKYNLK
VTFHIEPYSNRDDQNMYKNVKYIIDKYGNHPAFYRYKTKTGNALPMFYVYDSYITKPE
KWANLLTTSGSRSIRNSPYDGLFIALLVEEKHKYDILQSGFDGIYTYFATNGFTYGSS
HQNWASLKLICDKYNLIFIPSVGPGYIDTSIRPWNTQNTRNRINGKYYEIGLSAALQT
RPSLISITSFNEWHEGTQIEKAVPKRTSNTVYLDYRPHKPGLYLELTRKWSEKYSKER
ATYALDRQLPVS"
regulatory 4550..4555
/regulatory_class="polyA_signal_sequence"
polyA_site 4575
BASE COUNT 1572 a 753 c 704 g 1567 t
ORIGIN
1 gggggctgtc tgggctcggg gcgcggcggc agtcagctct atgttcgcgg tcttaacctc
61 tcctctggcc gagtccttgc aagaagtgaa ttacccgacc ctgcaaaaca cttactattt
121 tggagtttaa agtatgtcat catggcaaag tttcggagaa ggacttgcat cattttggca
181 ctttttattc tatttatttt ctctctgatg atgggtttaa aaatgctgag accaaataca
241 gctacttttg gagctccttt tggacttgac cttcttccag aacttcatca acgaactatt
301 catttgggga aaaattttga tttccaaaag agtgacagaa tcaacagtga aacaaatacc
361 aagaatttaa aaagtgttga aatcactatg aaaccttcca aagcctctga acttaacttg
421 gatgaactac cacctctgaa caattatcta catgtatttt attacagttg gtatggaaat
481 ccacaatttg atggtaaata tatacattgg aatcatccag tgttagagca ttgggaccct
541 agaatagcca agaattatcc acaagggaga cacaaccctc cagatgacat tggctccagc
601 ttttatcctg aattgggaag ttacagttct cgggatcctt ctgtcataga aactcacatg
661 agacaaatgc gctcagcttc aattggtgta ctagccctct cttggtaccc acctgatgta
721 aatgatgaaa atggagaacc tactgataac ttggtaccca ctattttgga taaagctcat
781 aaatataacc taaaggttac ttttcacata gaaccatata gcaatcgaga tgatcaaaac
841 atgtacaaaa atgtcaagta tattatagac aaatatggaa atcatccggc cttttacagg
901 tacaagacga agactggcaa tgctcttcct atgttttatg tctatgattc ctatattacc
961 aagcctgaaa aatgggccaa tctgttaacc acctcagggt ctcggagtat tcgcaattct
1021 ccttatgatg gactgtttat tgcccttctg gtagaagaaa aacataagta tgatattctt
1081 caaagtggtt ttgatggaat ttacacatat tttgccacaa atggctttac ttatggctca
1141 tcacatcaga attgggctag cctaaaatta atttgtgata aatacaactt aatatttatc
1201 ccaagtgtgg gcccaggata catagatacc agcattcgtc catggaacac gcaaaacact
1261 cggaaccgaa tcaatgggaa gtattatgaa attggtctga gtgccgcact tcagacacgc
1321 cccagcttaa tttctatcac ctcttttaat gagtggcatg aaggaactca gattgaaaaa
1381 gctgttccca aaagaaccag taatacagtg tacctagatt accgtcctca taaaccaggt
1441 ctttacctag aactgactcg caagtggtct gaaaaataca gtaaggaaag agcaacttat
1501 gcattagatc gccagctgcc tgtttcttaa tgcattgatt aaagtttaat agttatcaaa
1561 atcacctaat ttttaaaaat agctttcgtt ttgagttctg gaaagaaaac tgtcaaaatc
1621 agtatatact attagttata tttaaaaata tttttttaaa ttctttacag ataatattat
1681 acttgttacc cttcacaata ccacatgaga aaatatctga gacaaaatgt atacaaatat
1741 attccttatg gcataattta ttgcatttct gactgaaatc aaaattctga tttgatggca
1801 attgaatttt cattttacaa tagataaatg cttgtgttac ctaaagcact tagcacacag
1861 ttaaattata tttacatccc agacccaaat aaataggatt gtgtgtatat ttgggatatc
1921 tattgaagaa aaaaagaaaa ccccttaaag ataatgtaca tgcttcatgt catgtcttta
1981 aaataattta atcaacttta ttgtcttagt atttagactc tggataactc tacaataatg
2041 aggaaattct taagaataac aaaatcactg taccttcctc tcaattttgc tgtgaacctg
2101 aaatggcttt aaattaatac tcttattttt tatttaattt aattacataa attaaacctt
2161 accatgacca aattgtgtta ggaaggcctg ctatctacag cacagtgtgt catttgcaga
2221 tttgtggtta cctataccac gctaggtgtt ttgacatgtt tagtgtttct gctttacagt
2281 gctgaattcc atattttaga agctatgaaa gtccttttat gaaaaagtta ctgattgctt
2341 ctcagttatt aggaaaacag ttgtttcaca attattatgt agatatgatg cccaaatatc
2401 atttttagta tatcttgtcg atctttaagt tgttactatt gtgttattca tgtctttaaa
2461 tcagatacca aatatttttt aggaaagaaa aatgttatta ctgtcattag gttgtctttt
2521 aatactttaa gttattttga cgaaaagtaa tagagaaaat ttacttagca ttttagattc
2581 tagagacatg gaaatgaaaa ttattttatg tctagagtag gtcctgaagt ttggctttac
2641 attaagttta gcactgtatc agaatgaaga aactaatatt ttacataaaa actaatactt
2701 tcaatttttt atatagtaat atccccattt tgtaaatgtt agacttttat catacctgta
2761 agttaaaata cttgttatca ataacttgtc atattgtgac aaattgatca cttgtgtacg
2821 aaaaataaat ctccttaaaa actaaataaa atgcactgta ttcttacagt taatgtttat
2881 aactatagta aaaaattaat atatatccta ttacataaat gttatttctt aggtgttcca
2941 ttaagaagag caatagaata atgctaaaaa ataatgccta taaatcttca gagtataaag
3001 acatccattc agaaacaaaa attagcacta aattttttat aaaatagacc agatgacaaa
3061 atttatttta tttttaaaca gtggttttga cacaaattat gttattgaaa agcattatta
3121 atgtttaatt tatttaaaat tttggaattt gccatttctc agacaatgat caggccttag
3181 gaaattaata cagtagtagt aatcattttc taggggaaaa taaaagaata aatcactata
3241 ctgatatttt gatataagca agcacttaca tggtaatcac tatatagatc caacctgtgg
3301 attttcttct tatgtccatt taactagaat atattatttt aggtataatt tacaaatgtc
3361 acacctaata atcttttata atataccata tttcattaaa gttttgttag agaagtatct
3421 accacagagg agtttttgtc attgtgtacg ttgtgtattt gaacccacca tgacagaaag
3481 taaattttag gaaatagtta tgagattaag ggaaaatcta taaaaacaag gttagcatat
3541 tctcaacaca gataccacca ctttcttttt cccattatag acatggtgaa tccacacagc
3601 atacttcatc tctgagcttt gttgtgattc ctcaacacat taccctaacc agccagcagt
3661 aacagatttc agagtaagat aaagcagatt ctgtcttcat tgcaaaaagt tattctcaat
3721 ggaagaatgg catctgatct cataattact agtttatatt aatatagttt ttttctccct
3781 ttttaataaa ataattacag tcatccctca gtgtctgtgg gggattggtt ccagttaccc
3841 ctatagatac caaaatctgc agatgctcaa gtccctgata taaactggca tagtagttgc
3901 atataatcta tgcacatcct cctgtataca ttaagtcatc tctagattat ttataacact
3961 taatacaatg taaatgctat gtagttgtta taccatactg gttagtgaat aattacatga
4021 aaaaaaagag tctgtacatc ttcagagttt cagtcggcaa tttcttggcc atggatgtag
4081 aacctacaga taaggtgagc caactgcatt aggaaataac tctaataatt ctgttaattc
4141 ttagagagga aaactttcaa aatcttcctc aggtatttat tacaactgcc tttaccattt
4201 tagttgtaac acagtttaaa ttgttatgat aacaagtaaa taagagcaaa gaatttattt
4261 cttaattcaa aactatacgt ttgaattcaa tatggtataa cttaaagtgg tataatacat
4321 acaatgcatg aatcataatg gattctttta taagttatta atttttatgg tttaatcagt
4381 ctaattgttt tgactgttat agaaaccaaa tattttactg tttcttttaa ggactaatat
4441 tgtcaaaaac tgctgttatt aacttcactt gagttgttta acttccttct gttttaagat
4501 tgtaattaaa aattactatt ttgttatatg gaatggttaa tttttaccta ataaaaacat
4561 agatgaaata cattgaaaaa aaaaaaaaaa aaaaca
//