LOCUS BX640842 2811 bp mRNA linear HTC 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686O13216 (from clone DKFZp686O13216).
ACCESSION BX640842
VERSION BX640842.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2811)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp686O13216) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686O13216
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..2811
/db_xref="H-InvDB:HIT000055389"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686O13216"
/tissue_type="rectum tumor"
/note="hypothetical protein, differentially spliced"
/db_xref="taxon:9606"
CDS 241..>2790
/codon_start=1
/gene="DKFZp686O13216"
/product="hypothetical protein"
/db_xref="H-InvDB:HIT000055389.15"
/db_xref="InterPro:IPR001611"
/db_xref="InterPro:IPR032675"
/db_xref="InterPro:IPR041267"
/db_xref="UniProtKB/TrEMBL:Q6MZW3"
/protein_id="CAE45914.2"
/translation="MASPKVNKDTLTQYVTLHSRWVQRTKARLGLSDHLPTFLAGLAS
CTCRPFLSHLAQGNEDCVGAKQAAVVQVLKKLATRKLTGPKVVELCHCVDETQEPELA
SLTAQSLPYQLPFHNFPLTCTDLATLTNILEHREAPIHLDFDGCPLEPHCPEALVGCG
QIENLSFKSRKCGDAFAEALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCPQL
KEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSSNSICVSTLLCLARVAVTCPTVRM
LQAREADLIFLLSPPTETTAELQRAPDLQESDGQRKGAQSRSLTLRLQKCQLQVRDAE
ALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIARKLDLSDNGLSVAGVHCV
LRAVSACWTLAELHISLQHKTVIFMFAQEPEEQKGPQERAAFLDSLMLQMPSELPLSS
RRMRLTHCGLQEKHLEQLCKALGGSCHLGHLHLDFSGNALGDEGAARLAQLLPGLGAL
QSLNLSENGLSLDAVLGLVRCFSTLQWLFRLDISFESQHILLRGDKTSSLSECPLEPP
SLTRLCATLKDCPGPLELQLSCGFLSDQSLETLLDCLPQLPQLSLLQLSQTGLSPKSP
FLLANTLSLCPRVKKVDLRSLHHATLHFRSNEEEEGVCCGFTGCSLSQEHVESLCWLL
SKCKDLSQVDLSANLLGDSGLRCLLECLPQVPISGLLDLSHNSISQESALYLLETLPS
CPRVREASVNLGSEQSFRIHFSREDQAGKTLRLSECSFRPEHVSRLATGLSKSLQLTE
LTLTQCCLGQKQLAILLSLVGRPAGLFSLRDSTRHTEKLSFPTLEACALGFK"
BASE COUNT 601 a 853 c 789 g 568 t
ORIGIN
1 gtttccaggc cctgttcctt tttgaattcc gccagctcaa cttgatcacg aggttcctga
61 caccgtccga gctccttttt gatctgtacc tgagtcctga atcggaccac gacactgtct
121 tccagtacct ggagaagaac gctgacctcc ttctgcgtcc gcacaggccc tgggcaccag
181 cagacaggct atgctttcac ccacctcagc ctgcaggagt ttcttgctgc cctgcacctg
241 atggccagcc ccaaggtgaa caaagacaca cttacccagt atgttaccct ccattcccgc
301 tgggtacagc ggaccaaagc tagactgggc ctctcagacc acctccccac cttcctggcg
361 ggcctggcat cctgcacctg ccgccccttc cttagccacc tggcgcaggg caatgaggac
421 tgtgtgggtg ccaagcaggc tgctgtagtg caggtgttga agaagttggc cacccgcaag
481 ctcacagggc caaaggttgt agagctgtgt cactgtgtgg atgagacaca ggagcctgag
541 ctggccagtc tcaccgcaca aagcctcccc tatcaactgc ccttccacaa tttcccactg
601 acctgcaccg acctggccac cctgaccaac atcctagagc acagggaggc ccccatccac
661 ctggattttg atggctgtcc cctggagccc cactgccctg aggctctggt aggctgtggg
721 cagatagaga atctcagctt taagagcagg aagtgtgggg atgcctttgc agaagccctc
781 tccaggagct tgccgacaat ggggaggctg cagatgctgg ggttagcagg aagtaaaatc
841 actgcccgag gcatcagcca cctggtgaaa gctttgcctc tctgtccaca gctgaaagaa
901 gtcagttttc gggacaacca gctcagtgac caggtggtgc tgaacattgt ggaggttctc
961 cctcacctac cacggctccg gaagcttgac ctgagcagca acagcatctg cgtgtcaacc
1021 ctactctgct tggcaagggt ggcagtcacg tgtcctaccg tcaggatgct tcaggccagg
1081 gaggcggacc tcatcttcct tctttccccg cccacagaga caactgcaga gctacaaaga
1141 gctccagacc tgcaggaaag tgacggccag aggaaagggg ctcagagcag aagcttgacg
1201 ctcaggctgc agaagtgtca gctccaggtc cgtgatgcgg aggccctcat agccctgctc
1261 caggaaggcc ctcacctgga ggaagtggac ctctcaggga accagctgga agatgaaggc
1321 tgtcggctga tggcagaggc tgcatcccag ctgcacatcg ccaggaagct ggacctcagt
1381 gacaacgggc tttctgtggc cggggtgcat tgtgtgctga gggccgtgag tgcgtgctgg
1441 accctggcag agctgcacat cagcctgcag cacaaaactg tgatcttcat gtttgcccag
1501 gagccagagg agcagaaggg gccccaggag agggctgcat ttcttgacag cctcatgctc
1561 cagatgccct ctgagctgcc tctgagctcc cgaaggatga ggctgacaca ttgtggcctc
1621 caagaaaagc acctagagca gctctgcaag gctctgggag gaagctgcca cctcggtcac
1681 ctccacctcg acttctcagg caatgctctg ggggatgaag gtgcagcccg gctggctcag
1741 ctgctcccag ggctgggagc tctgcagtcc ttgaacctca gtgagaacgg tttgtccctg
1801 gatgccgtgt tgggtttggt tcggtgcttc tccactctgc agtggctctt ccgcttggac
1861 atcagctttg aaagccaaca catcctcctg agaggggaca agacaagcag cctcagtgag
1921 tgtcctctgg agcccccaag cctcacccgc ctctgtgcca ctctgaagga ctgcccggga
1981 cccctggaac tgcaattgtc ctgtgggttt ctgagtgacc agagcctgga gactctactg
2041 gactgcttac ctcaactccc tcagctgagc ctgctgcagc tgagccagac gggactgtcc
2101 ccgaaaagcc ccttcctgct ggccaacacc ttaagcctgt gtccacgggt taaaaaggtg
2161 gatctcaggt ccctgcacca tgcaactttg cacttcagat ccaacgagga ggaggaaggc
2221 gtgtgctgtg ggttcacagg ctgcagcctc agccaggagc acgtagagtc actctgctgg
2281 ttgctgagca agtgtaaaga cctcagccag gtggatctct cagcaaacct gctgggcgac
2341 agcggactca gatgccttct ggaatgtctg ccgcaggtgc ccatctccgg tttgcttgat
2401 ctgagtcaca acagcatttc tcaggaaagt gccctgtacc tgctggagac actgccctcc
2461 tgcccacgtg tccgggaggc ctcagtgaac ctgggctctg agcagagctt ccggattcac
2521 ttctccagag aggaccaggc tgggaagaca ctcaggctaa gtgagtgcag cttccggcca
2581 gagcacgtgt ccaggctggc caccggcttg agcaagtccc tgcagctgac ggagctcacg
2641 ctgacccagt gctgcctggg ccagaagcag ctggccatcc tcctgagctt ggtggggcga
2701 cccgcagggc tgttcagcct cagagactcc acaaggcaca cagagaaact gtccttcccc
2761 acactggagg cctgtgcttt gggatttaag aaaaaaaaaa aaaaaaaaac a
//