LOCUS BX640827 4017 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686M01205 (from clone DKFZp686M01205).
ACCESSION BX640827
VERSION BX640827.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4017)
AUTHORS Bloecker H., Boecher M., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (26-AUG-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology
Ltd., Braunschweig/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686M01205) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4017
/db_xref="H-InvDB:HIT000055375"
/organism="Homo sapiens"
/map="5q34"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686M01205"
/tissue_type="human fetal brain"
/db_xref="taxon:9606"
CDS <1..3254
/codon_start=3
/gene="DKFZp686M01205"
/product="hypothetical protein"
/note="KIBRA protein, N-terminus truncated, differentially
spliced"
/db_xref="GOA:Q8IX03"
/db_xref="H-InvDB:HIT000055375.13"
/db_xref="HGNC:HGNC:29435"
/db_xref="InterPro:IPR001202"
/db_xref="InterPro:IPR035892"
/db_xref="InterPro:IPR036020"
/db_xref="InterPro:IPR037771"
/db_xref="PDB:2Z0U"
/db_xref="PDB:6FB4"
/db_xref="PDB:6FD0"
/db_xref="PDB:6FJC"
/db_xref="PDB:6FJD"
/db_xref="UniProtKB/Swiss-Prot:Q8IX03"
/protein_id="CAE45903.1"
/translation="DPRDRYTKPLTFADCISDELPLGWEEAYDPQVGDYFIDHNTKTT
QIEDPRVQWRREQEHMLKDYLVVAQEALSAQKEIYQVKQQRLELAQQEYQQLHAVWEH
KLGSQVSLVSGSSSSSKYDPEILKAEIATAKSRVNKLKREMVHLQHELQFKERGFQTL
KKIDKKMSDAQGSYKLDEAQAVLRETKAIKKAITCGEKEKQDLIKSLAMLKDGFRTDR
GSHSDLWSSSSSLESSSFPLPKQYLDVSSQTDISGSFGINSNNQLAEKVRLRLRYEEA
KRRIANLKIQLAKLDSEAWPGVLDSERDRLILINEKEELLKEMRFISPRKWTQGEVEQ
LEMARKRLEKDLQAARDTQSKALTERLKLNSKRNQLVRELEEATRQVATLHSQLKSLS
SSMQSLSSGSSPGSLTSSRGSLVASSLDSSTSASFTDLYYDPFEQLDSELQSKVEFLL
LEGATGFRPSGCITTIHEDEVAKTQKAEGGGRLQALRSLSGTPKSMTSLSPRSSLSSP
SPPCSPLMADPLLAGDALLNSLEFEDPELSATLCELSLGNSAQERYRLEEPGTEGKQL
GQAVNTAQGCGLKVACVSAAVSDESVAGDSGVYEASVQRLGASEAAAFDSDESEAVGA
TRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRP
LDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEERLGGAQISLAEVCRSGE
RSTRWYNLLSYKYLKKQSRELKPVGVMAPASGPASTDAVSALLEQTAVELEKRQEGRS
NTQTLEDSWRYEETSENEAVAEEEEEEVEEEEGEEDVFTEKASPDMDGYPALKVDKET
NTETPAPSPTVVRPKDRRVGTPSQGPFLRGSTIIRSKTFSPGPQSQYVCRLNRSDSDS
STLSKKPPFVRNSLERRSVRMKRPSPPPQPSSVKSLRSERLIRTSLDLELDLQATRTW
HSQLTQEISVLKELKEQLEQAKSHGEKELPQWLREDERFRLLLRMLEKRMDRAEHKGE
LQTDKMMRAAAKDVHRLRGQSCKEPPEVQSFREKMAFFTRPRMNIPALSADDV"
regulatory 3973..3978
/regulatory_class="polyA_signal_sequence"
polyA_site 3988
BASE COUNT 1052 a 1022 c 1137 g 806 t
ORIGIN
1 tcgacccgcg ggacaggtac accaaaccgc tcacctttgc tgactgcatt agtgatgagt
61 tgccgctagg atgggaagag gcatatgacc cacaggttgg agattacttc atagaccaca
121 acaccaaaac cactcagatt gaggatcctc gagtacaatg gcggcgggag caggaacata
181 tgctgaagga ttacctggtg gtggcccagg aggctctgag tgcacaaaag gagatctacc
241 aggtgaagca gcagcgcctg gagcttgcac agcaggagta ccagcaactg catgccgtct
301 gggagcataa gctgggctcc caggtcagct tggtctctgg ttcatcatcc agctccaagt
361 atgaccctga gatcctgaaa gctgaaattg ccactgcaaa atcccgggtc aacaagctga
421 agagagagat ggttcacctc cagcacgagc tgcagttcaa agagcgtggc tttcagaccc
481 tgaagaaaat cgataagaaa atgtctgatg ctcagggcag ctacaaactg gatgaagctc
541 aggctgtctt gagagaaaca aaagccatca aaaaggctat tacctgtggg gaaaaggaaa
601 agcaagatct cattaagagc cttgccatgt tgaaggacgg cttccgcact gacagggggt
661 ctcactcaga cctgtggtcc agcagcagct ctctggagag ttcgagtttc ccgctaccga
721 aacagtacct ggatgtgagc tcccagacag acatctcggg aagcttcggc atcaacagca
781 acaatcagtt ggcagagaag gtcagattgc gccttcgata tgaagaggct aagagaagga
841 tcgccaacct gaagatccag ctggccaagc ttgacagtga ggcctggcct ggggtgctgg
901 actcagagag ggaccggctg atccttatca acgagaagga ggagctgctg aaggagatgc
961 gcttcatcag cccccgcaag tggacccagg gggaggtgga gcagctggag atggcccgga
1021 agcggctgga aaaggacctg caggcagccc gggacaccca gagcaaggcg ctgacggaga
1081 ggttaaagtt aaacagtaag aggaaccagc ttgtgagaga actggaggaa gccacccggc
1141 aggtggcaac tctgcactcc cagctgaaaa gtctctcaag cagcatgcag tccctgtcct
1201 caggcagcag ccccggatcc ctcacgtcca gccggggctc cctggttgca tccagcctgg
1261 actcctccac ttcagccagc ttcactgacc tctactatga cccctttgag cagctggact
1321 cagagctgca gagcaaggtg gagttcctgc tcctggaggg ggccaccggc ttccggccct
1381 caggctgcat caccaccatc cacgaggatg aggtggccaa gacccagaag gcagagggag
1441 gtggccgcct gcaggctctg cgttccctgt ctggcacccc aaagtccatg acctccctat
1501 ccccacgttc ctctctctcc tccccctccc caccctgttc ccctctcatg gctgaccccc
1561 tcctggctgg tgatgccctc ctcaactcct tggagtttga agacccggag ctgagtgcca
1621 ctctttgtga actgagcctt ggtaacagcg cccaggaaag ataccggctg gaggaaccag
1681 gaacggaggg caagcagctg ggccaagctg tgaatacggc ccaggggtgt ggcctgaaag
1741 tggcctgtgt ctcagccgcc gtatcggacg agtcagtggc tggagacagt ggtgtgtacg
1801 aggcttccgt gcagagactg ggtgcttcag aagctgctgc atttgacagt gacgaatcgg
1861 aagcagtggg tgcgacccga attcagattg ccctgaagta tgatgagaag aataagcaat
1921 ttgcaatatt aatcatccag ctgagtaacc tttctgctct gttgcagcaa caagaccaga
1981 aagtgaatat ccgcgtggct gtccttccat gctctgaaag cacaacctgc ctgttccgga
2041 cccggcctct ggacgcctca gacactctag tgttcaatga ggtgttctgg gtatccatgt
2101 cctatccagc ccttcaccag aagaccttaa gagtcgatgt ctgtaccacc gacaggagcc
2161 atctggaaga gcgcctggga ggcgcccaga tcagcctggc ggaggtctgc cggtctgggg
2221 agaggtcgac tcgctggtac aaccttctca gctacaaata cttgaagaaa cagagcaggg
2281 agctcaagcc agtgggagtc atggcccctg cctcagggcc tgccagcacg gacgctgtgt
2341 ctgctctgtt ggaacagaca gcagtggagc tggagaagag gcaggagggc aggagcaaca
2401 cacagacact ggaagacagc tggaggtatg aggagaccag tgagaatgag gcagtagccg
2461 aggaagagga ggaggaggtg gaggaggagg agggagaaga ggatgttttc accgagaaag
2521 cctcacctga tatggatggg tacccagcat taaaggtgga caaagagacc aacacggaga
2581 ccccggcccc atcccccaca gtggtgcgac ctaaggaccg gagagtgggc accccgtccc
2641 aggggccatt tcttcgaggg agcaccatca tccgctctaa gaccttctcc ccaggacccc
2701 agagccagta cgtgtgccgg ctgaatcgga gtgatagtga cagctccact ctgtccaaaa
2761 agccaccttt tgttcgaaac tccctggagc gacgcagcgt ccggatgaag cggccgtccc
2821 cacccccaca gccttcctcg gtcaagtcgc tgcgctccga gcgtctgatc cgtacctcgc
2881 tggacctgga gttagacctg caggcgacaa gaacctggca cagccaactg acccaggaga
2941 tctcggtgct gaaggagctc aaggagcagc tggaacaagc caagagccac ggggagaagg
3001 agctgccaca gtggttgcgt gaggacgagc gtttccgcct gctgctgagg atgctggaga
3061 agcggatgga ccgagcggag cacaagggtg agcttcagac agacaagatg atgagggcag
3121 ctgccaagga tgtgcacagg ctccgaggcc agagctgtaa ggaaccccca gaagttcagt
3181 ctttcaggga gaagatggca tttttcaccc ggcctcggat gaatatccca gctctctctg
3241 cagatgacgt ctaatcgcca gaaaagtatt tcctttgttc cactgaccag gctgtgaaca
3301 ttgactgtgg ctaaagttat ttatgtggtg ttatatgaag gtactgagtc acaagtcctc
3361 tagtgctctt gttggtttga agatgaaccg actttttagt ttgggtccta ctgttgttat
3421 taaaaacaga acaaaaacaa aacacacaca cacacaaaaa cagaaacaaa aaaaaccagc
3481 attaaaataa taagattgta tagtttgtat atttaggagt gtatttttgg gaaagaaaat
3541 ttaaatgaac taaagcagta ttgagttgct gctcttctta aaatcgttta gatttttttt
3601 ggtttgtaca gctccacctt ttagaggtct tactgcaata agaagtaatg cctgggggac
3661 ggtaatccta ataggacgtc ccgcacttgt cacagcacag ctaatttttc ctagttaaca
3721 tattttgtac aatattaaaa aaatgcacag aaaccattgg gggggattca gaggtgcatc
3781 cacggatctt cttgagctgt gacgtgtttt tatgtggctg cccaacgtgg agcgggcagt
3841 gtgataggct gggtgggcta agcagcctag tctatgtggg tgacaggcca cgctggtctc
3901 agatgcccag tgaagccact aacatgagtg aggggagggc tgtggggaac tccattcagt
3961 tttatctcca tcaataaagt ggcctttcaa aaaaaagaaa aaaaaaaaaa aaaaaca
//