LOCUS BX640813 4100 bp mRNA linear HTC 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686C21224 (from clone DKFZp686C21224).
ACCESSION BX640813
VERSION BX640813.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4100)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp686C21224) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686C21224
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4100
/db_xref="H-InvDB:HIT000055361"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686C21224"
/tissue_type="small intestine"
/note="hypothetical protein, differentially spliced"
/db_xref="taxon:9606"
CDS 195..2090
/codon_start=1
/gene="DKFZp686C21224"
/product="hypothetical protein"
/db_xref="GOA:Q9BQI5"
/db_xref="H-InvDB:HIT000055361.15"
/db_xref="HGNC:HGNC:25412"
/db_xref="InterPro:IPR018808"
/db_xref="InterPro:IPR028565"
/db_xref="InterPro:IPR036168"
/db_xref="InterPro:IPR037984"
/db_xref="PDB:5AWR"
/db_xref="PDB:5AWS"
/db_xref="PDB:5AWT"
/db_xref="PDB:5AWU"
/db_xref="PDB:6A9Y"
/db_xref="UniProtKB/Swiss-Prot:Q9BQI5"
/protein_id="CAE45891.1"
/translation="MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIKKSNGAPNGFY
AEIDWERYNSPELDEEGYSIRPEEPGSTKGKHFYSSSESEEEEESHKKFNIKIKPLQS
KDILRNAATVDELKASIGNIALSPSPVGAIKRNLSSEEVARPRRSTPTPELISKKPPD
DTTALAPLFGPPLESAFDEQKTEVLLDQPEIWGSGQPINPSMESPKLTRPFPTGTPPP
LPPKNVPATPPRTGSPLTIGPGASSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGK
PGVGDVSRPFSPPIHSSSPPPIAPLARAESTSSISSTNSLSAATTPTVVSEDDVFYDK
LPSFERRCETPAGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITGE
MVLSFPAGITRHFANNPSPAALTFRVINFSRLEHVLPNPQLLCCDNTQNDANTKEFWV
NMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVNWRCEPSSTDLRI
DYKYNTDAMTTAVALNNVQFLVPIDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKS
ENGGVGSLLARFQLSEGPSKPSPLVVQFTSEGSTLSGCDIELVGAGYRFSLIKKRFAA
GKYLADN"
BASE COUNT 1358 a 817 c 767 g 1158 t
ORIGIN
1 ggagaaagag agacggagag agagagagac gcacagatgt gcacggaggc cacagacact
61 gacatttgga attccttcag gcggacggaa tagacctcag cagcggcgtg gtgaggactt
121 agctgggacc tggaatcgta tcctcctgtg ttttttcaga ctccttggaa attaaggaat
181 gcaattctgc caccatgatg gaaggattga aaaaacgtac aaggaaggcc tttggaatac
241 ggaagaaaga aaaggacact gattctacag gttcaccaga tagagatgga attaagaaaa
301 gcaatggggc accaaatgga ttttatgcgg aaattgattg ggaaagatat aactcacctg
361 agctggatga agaaggctac agcatcagac ccgaggaacc cggctctacc aaaggaaagc
421 acttttattc ttcaagtgaa tcggaagaag aagaagaatc acataagaaa tttaatatca
481 agattaaacc attgcaatct aaagacattc ttaggaatgc tgcaactgta gatgaattga
541 aggcatcaat aggcaacatc gcactttccc catcaccagt gggtgcaatt aaaaggaact
601 tatccagtga agaagtggca agacccaggc gttccacacc aactccagaa cttataagca
661 aaaagcctcc agatgacact acggcccttg ctcctctctt tggcccacca ctagaatcag
721 cttttgatga acagaagaca gaagttcttt tagatcagcc tgagatatgg ggttcaggcc
781 aaccaattaa tccaagcatg gagtcgccaa agttaacaag gccttttccc actggaacac
841 ctccaccact gcctccaaaa aatgtaccag ctaccccacc ccgaacagga tcccccttaa
901 caattggacc aggtgcatca tcccctgctc gaccagccac tcctttggtt ccttgcagaa
961 gtaccactcc acctccacct cctccccggc ctccatcccg gccaaagcta cctccaggaa
1021 aacctggagt tggagatgtg tccagacctt ttagccctcc cattcattct tccagccctc
1081 ctccaatagc acccttagcg cgggctgaaa gcacttcttc aatatcgtca accaattcct
1141 tgagcgcagc caccactccc acagttgtgt cagaagacga tgttttttat gacaaactgc
1201 cctcgtttga aaggcgctgt gaaacgcctg caggttcttc caggggaccc agccccctaa
1261 ccatgggagc tcaggacact ctccctgttg cagcagcatt tacagaaaca gtcaatgcct
1321 atttcaaagg agcagaccca agcaaatgta tcgttaagat taccggagaa atggtgttgt
1381 catttcctgc tggcatcacc agacactttg ccaacaaccc gtccccagct gctctgactt
1441 ttcgggtgat aaatttcagc aggttagaac acgtcctgcc aaacccccaa cttctctgct
1501 gtgataatac acaaaatgat gccaatacca aggaattctg ggtaaacatg ccaaatttga
1561 tgactcacct aaagaaagtg tctgaacaaa aaccccaggc tacatattat aacgttgaca
1621 tgctcaaata tcaggtgtct gcccagggca ttcagtccac acctctgaac ctggcagtga
1681 attggcgatg tgagccttca agcactgacc tgcgcataga ttacaaatat aatacagatg
1741 caatgacgac tgctgtggcc ctcaacaatg tgcagttcct ggtccccatc gacggaggag
1801 tcaccaagct ccaggcagtg ctcccaccag cagtctggaa tgctgaacaa cagagaatat
1861 tgtggaagat tcctgatatc tctcagaagt cagaaaatgg aggggtgggt tctttgttgg
1921 caagatttca gttatctgaa ggcccaagca aaccttctcc attggttgtg cagttcacaa
1981 gtgaaggaag caccctttct ggctgtgaca ttgaacttgt tggagcaggg tatcgatttt
2041 cactcatcaa gaaaaggttt gctgcaggaa aatacttggc agataactaa tgaaatctta
2101 tgcaaggatt tggaggattc atataatgga gaactgatgt atgagaaaca gattttaatt
2161 ttggtttgat gaaaacaaac caatatctgc acttgggata tatcaggtgg aaagtcaatg
2221 actttcatct gtgatttccc tcacacacta ccatgatgac cagtcctaca gtatttactt
2281 ctaggtgtaa tattgttaat ggttttaaaa tgtaattatt gtatttgtaa attgtactct
2341 cattccagta aggcagttag acacttgagt tttagcattt taccattcct gaaatggatg
2401 taatttaaac tgtggtatgt aaatttaata gtagtattgt tgaatggcac aatgcttaca
2461 gaggtagatt gcattttgtc aatatataaa atttaaatat aatattgata gctgtcataa
2521 agggggtgcc acatattaaa gaaacttaag tggaaccaga agaaaaagaa acaaacttac
2581 ttttcttcaa tgcttagtat gttttactct agtgctaaat aaaaactcta tcttcaaatg
2641 tttagtgggt taaattgaga aactatttca gaaaaaaatt ctaaggttac agcatattca
2701 aagaaaagca ttagttacca ctttttaaaa agcttttttt tcaaactgca aatttcataa
2761 aaatgcaaac tgtgtaaaca gggcctctta tttttataac ttgtgtaaaa agggaaagca
2821 attcatattt aaagtttaag tatattaaat tataatcaag agtaaagaag atgttgaagt
2881 cttaactact tgcccctctc tacagtttcg caaatgtggg gattgctgaa taatcagtca
2941 gactaaaacc aaaattgtga ttttaagatt tcaagacttt ccgtagttga actggttaag
3001 aatttttgct tagttactct gaatagatga tcttactcat ccagtatggg ggaatgatac
3061 ctcacgtctt cctctttacc cacaggaatc aaaacgctga gactgagaat tttagggaaa
3121 aaaaagtcca ctgtttagat ccagaaggag agttttaatc attgtttata tcatttgaga
3181 atgaaaaaat aagcttcata aatgaaattc tattcacatt actgtgtaat aaatttccat
3241 ttggatgatt aggattcatt gtataaaact gtaaatcttt gccattcttg gagaagcaaa
3301 aggagagtta tcaaaaatgt atgtcgtttc atcgttgcaa ggtataataa aaactgtaat
3361 tattcaatct ggccctgcca tatgaacatt tagaaagaca aacttcttcg ggagtctcag
3421 ttgtaaaacc ttccctcatt aatatctgaa aatgttagtc ttcctttaag tcatagaact
3481 tatttaaaca taaaccaatt tctattacag gttatgctat taaatagctg taattattaa
3541 gttattattt ttataattag ttgttaaatt tcattttaca cccactcaaa tttaacaaag
3601 aatctttagc ccctttaaat tttagaatta aattaaattt ttaaagtttt acttctaaaa
3661 tgagattgtg actggcaatt gtttatagtg aaacttttta aattaatctt tgtactcctc
3721 tatcagtgct tgctaccaag agaatgtcca aaatgatttg ttttaccatg ggaaaattct
3781 tactattcaa caaactctca gttggccccc tacagcagtc tggtgttgaa gtttctttga
3841 acgaactaaa tatactcatt ttatgtaaag gtatccaatt tgattttgaa accaaaatag
3901 aaaatgcaaa attctaaatt ccatgaaaca tggaatttat gacaccaaaa tcaatggaga
3961 gtaagcagca gcaaactgag aattatccag catatgaata taacaatgtg tttttaagta
4021 atcaattcat ttaaaaaatt gaatattaat acaaagcata ttaaaaacat gtaaatatta
4081 aaaaaaaaaa aaaaaaaaca
//