LOCUS BX640797 3625 bp mRNA linear HUM 21-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686F1969 (from clone DKFZp686F1969).
ACCESSION BX640797
VERSION BX640797.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3625)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (26-AUG-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686F1969) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3625
/db_xref="H-InvDB:HIT000055345"
/organism="Homo sapiens"
/map="7p13"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686F1969"
/tissue_type="human endometrium carcinoma cell line"
/db_xref="taxon:9606"
CDS <1..2825
/codon_start=3
/gene="DKFZp686F1969"
/product="hypothetical protein"
/note="up-regulated gene 4, differentially spliced"
/db_xref="GOA:Q8TCY9"
/db_xref="H-InvDB:HIT000055345.18"
/db_xref="HGNC:HGNC:30890"
/db_xref="InterPro:IPR006073"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR030383"
/db_xref="UniProtKB/Swiss-Prot:Q8TCY9"
/protein_id="CAE45880.1"
/translation="GGSGDLAALMASPGIEVELLGKGHSDLGEVAPEIKASERRTAVA
IADLEWREMEGDDCEFRYGDGTNEAQDNDFPTVERSRLQEMLSLLGLETYQVQKLSLQ
DSLQISFDSMKNWAPQVPKDLPWNFLRKLQALNADARNTTMVLDVLPDARPVEKESQM
EEEIIYWDPADDLAADIYSFSELPTPDTPVNPLDLLCALLLSSDSFLQQEIALKMALC
QFALPLVLPDSENHYHTFLLWAMRGIVRTWWSQPPRGMGSFREDSVVLSRAPAFAFVR
MDVSSNSKSQLLNAVLSPGHRQCDCFWHRDLNLGTNAREISDGLVEISWFFPSGREDL
DIFPEPVAFLNLRGDIGSHWLQFKLLTEISSAVFILTDNISKKEYKLLYSMKESTTKY
YFILSPYRGKRNTNLRFLNKLIPVLKIDHSHVLVKVSSTDSDSFVKRIRAIVGNVLRA
PCRRVSVEDMAHAARKLGLKVDEDCEECQKAKDRMERITRKIKDSDAYRRDELRLQGD
PWRKAAQVEKEFCQLQRAVDPPEKHRAELRRRLLELRMQQNGHDPSSGVQEFISGISS
PSLSEKQYFLRWMEWGLARVAQPRLRQPPETLLTLRPKHGGTTDVGEPLWPEPLGVEH
FLREMGQFYEAESCLVEAGRLPAGQRRFAHFPGLASELLLTGLPLELIDGSTLSMPVR
WVTGLLKELHVRLERRSRLVVLSTVGVPGTGKSTLLNTMFGLRFVTGKSCGPRGAFMQ
LITVAEGFSQDLGCDHILVIDSGGLIGGALTSAGDRFELEASLATLLMGLSNVTVISL
AETKDIPAAILHAFLRLEKTGHMPNYQFVYQNLHDVSVPGPRPRDKRQLLDPPGDLSR
AAAQMEKQGDGFRALAGLAFCDPEKQHIWHIPGLWHGAPPMAAVSLAYSEAIFELKRC
LLENIRNGLSNQNKNIQQLIELVRRL"
regulatory 3559..3564
/regulatory_class="polyA_signal_sequence"
polyA_site 3579
BASE COUNT 865 a 941 c 1077 g 742 t
ORIGIN
1 gaggcgggag cggagacctc gctgcgctca tggcgtcgcc cgggatagaa gtggaattac
61 tgggcaaagg gcattcagat ttgggagaag tagccccaga aataaaagca tcagagagac
121 gaacagctgt ggccattgca gatttggaat ggagagaaat ggaaggagat gattgcgagt
181 tccgttatgg agatggtaca aatgaggctc aggacaatga ttttccaaca gtggagagaa
241 gcaggcttca agaaatgctg tcacttttgg gcctagagac gtaccaggtc cagaaactca
301 gcctccagga ctctctgcag atcagttttg acagtatgaa gaactgggcc cctcaggttc
361 ccaaagactt gccctggaat ttcctcagga agttgcaggc cctcaatgct gatgccagga
421 ataccactat ggtgctggac gtgctcccag acgccaggcc tgtggagaag gagagccaga
481 tggaagagga gatcatctac tgggacccag ctgatgacct tgctgccgac atttattcct
541 tttctgagct gcccacccct gatacgccag tgaacccctt agaccttctc tgtgccctgc
601 tgctctcctc agacagtttc ctgcaacaag aaatagcgtt gaaaatggcc ctctgccagt
661 ttgcactccc actcgtgttg cctgactcgg agaaccacta ccatacattt ctgctgtggg
721 ccatgcgggg cattgtgagg acatggtggt cccagccccc aaggggcatg gggagcttcc
781 gggaagacag cgtggtcttg tccagggcgc ccgccttcgc cttcgtgcgc atggacgtca
841 gtagcaactc caagtcccag cttctcaacg ccgtcctcag cccgggccac aggcagtgtg
901 actgcttctg gcatcgggac ctcaacttgg gcaccaatgc ccgggagatt tcggatgggt
961 tggtagaaat ttcctggttt tttcccagcg gaagggagga cttggacatt ttcccagaac
1021 ctgtggcctt tctgaacctg agaggtgaca tcgggtctca ctggctgcag tttaagctct
1081 tgacagaaat ctcctccgct gtgtttatat tgactgacaa tatcagtaag aaggaataca
1141 aattgctgta ctccatgaag gagtcaacca caaaatacta cttcatcctg agtccctacc
1201 gtgggaagcg caacacaaac ctgagatttc tgaataagtt aattccggtg ctgaaaatag
1261 accactcaca tgtcctggta aaggtcagca gcactgacag cgacagcttc gtgaagagga
1321 tccgggccat cgttgggaat gtgctgcggg caccctgcag gcgggtatct gtggaggaca
1381 tggcgcacgc agcccgcaaa ctgggcctaa aggtcgacga ggactgtgag gagtgtcaga
1441 aagcgaaaga ccggatggag aggattacca ggaaaatcaa agactcggat gcctacagaa
1501 gggacgagct gaggctgcag ggggacccct ggagaaaggc agcccaagtg gagaaggagt
1561 tctgccagct ccagcgggcc gtggaccccc ctgagaagca cagggctgag ctgaggcggc
1621 ggctgctaga acttcgaatg cagcagaacg gccatgatcc ctcctcgggg gtgcaggagt
1681 tcatctcggg gatcagcagc ccctccttga gtgagaagca gtacttcctg aggtggatgg
1741 agtggggcct ggcacgggtg gcccagccgc gactgagaca gcctccggag acgcttctca
1801 ccctgagacc aaagcatggg ggcaccacag acgtggggga gccgctctgg cctgagcccc
1861 taggggtgga acacttcttg cgggagatgg gacagtttta tgaggctgag agctgtcttg
1921 tggaggcagg gaggctgccg gcaggccaga ggcgttttgc ccacttccca ggcttggcct
1981 cggagctgct gctgacaggg ctgcctctgg agctaatcga tgggagcacg ctgagcatgc
2041 ccgtccgctg ggtcacaggg ctcctgaagg agctgcacgt ccgactggag agacggtcaa
2101 ggctggtggt tctgtcaacc gtcggggtgc caggcacggg caagtccaca ctcctcaaca
2161 ccatgtttgg gctgcggttt gtcacaggga agagctgcgg tcctcgaggg gccttcatgc
2221 agctcatcac agtggctgag ggcttcagcc aggacctggg ctgtgaccac atcctggtga
2281 tagactccgg gggcttgata ggtggggcct tgacgtcagc tggggacaga tttgagctgg
2341 aggcttcctt ggccactctg ctcatgggac tgagcaatgt caccgtgatc agtctagctg
2401 aaaccaagga cattccagca gctattctgc atgcatttct gaggttagaa aaaacggggc
2461 acatgcccaa ctaccagttt gtataccaga accttcatga tgtatctgtt cccggcccta
2521 ggcccagaga caagagacag ctcctggatc cacctggtga cctgagcagg gctgcagccc
2581 agatggagaa acagggcgac ggcttccggg cactggcagg cctggccttc tgcgaccctg
2641 agaagcagca catctggcac atcccaggcc tgtggcacgg agcacctccc atggccgcag
2701 tgagcttggc ctacagtgaa gccatatttg aattgaagag atgcctactc gaaaacatca
2761 ggaacggctt gtcgaaccaa aacaaaaaca tccagcagct cattgagctg gtgagacggc
2821 tgtgagtgtg cagagaaacc cagttcaggt gtaggaggct gctgtgggca gccctgtctg
2881 atggggcacc cgtgtggggc tgtgctctgg tgcctgagaa tggctggtgc ccaatcgaca
2941 tgagaagacg aggaaaagac agggtttgga gtctcctcaa cagtgttaaa agaggaagtg
3001 acctcacaga ccagctcaga gatgttacca agaatatcac agcccccagg gtagggagac
3061 aagcagcagt ttgttctgtc tcagctcctg tcaaggatcc tgcggggtgg gccctctgta
3121 tagctgctct ctgtcactgg cccctggagt gggagcagcg tccttagtca ctgcaggccc
3181 aggcgggcag gtggtcccag gacagaggtg gggaagttgt cctgaggaag cagaagtagg
3241 ccttgctccc gcccaaccca agggcctcca gtggaccagc attcaagatg tgagtgcccg
3301 tggtgtgcaa ggcactccca tggcaccgta tttattgact gatctgtgaa ggcttccctg
3361 acccctgccc aggaagagtt cactggtcgc tctgttgtgc cccacagcac tttgttatac
3421 ctctgccaca cacttcacgc agcgcgttgt aactcatgtg tttacatgtc tgtcccccca
3481 gactgtgagc tccttgaggg cagggactgt acattctcca gctctgtgtc cccagggcct
3541 ggcacattgt agacgcttaa taaatgtctg ttaaattgga aaaaaaaaaa aaaaaaaaaa
3601 aaaaaaaaaa aaaaaaaaaa aaaaa
//