LOCUS BX640760 5125 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686I03263 (from clone DKFZp686I03263).
ACCESSION BX640760
VERSION BX640760.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5125)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (26-AUG-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686I03263) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..5125
/db_xref="H-InvDB:HIT000055308"
/organism="Homo sapiens"
/map="13q13.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686I03263"
/tissue_type="human cerebellum"
/db_xref="taxon:9606"
CDS <1..4711
/codon_start=2
/gene="DKFZp686I03263"
/product="hypothetical protein"
/note="BCL8B protein, N-terminus truncated, differentially
spliced"
/db_xref="H-InvDB:HIT000055308.13"
/db_xref="InterPro:IPR000409"
/db_xref="InterPro:IPR001680"
/db_xref="InterPro:IPR010508"
/db_xref="InterPro:IPR017986"
/db_xref="InterPro:IPR023362"
/db_xref="InterPro:IPR036322"
/db_xref="InterPro:IPR036372"
/db_xref="UniProtKB/TrEMBL:Q6N008"
/protein_id="CAE45866.1"
/translation="TDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQ
MVDNIIIACGGILPLLSAATSPTTELENIEVTQGMSAETAVTFLSRLMAMVDVLVFAS
SLNFSEIEAEKNMSSGGLMRQCLRLVCCVAVRNCLECRQRQRDRGNKSSHGSSKPQEV
PQSVTATAASKTPLENVPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLAL
AVVYFISVLMVSKYRDILEPQRETTRTGSQPGRNIRQEINSPTSTETPAAFPDTIKEK
ETPTPGEDIQVESSIPHTDSGIGEEQVASILNGAELETSTGPDAMSELLSTLSSEVKK
SQESLTENPSETLKPATSISSISQTKGINVKEILKSLVAAPVEIAECGPEPIPYPDPA
LKRETQAILPMQFHSFDRSVVVPVKKPPPGSLAVTTVGATTAGSGLPTGSTSNIFAAT
GATPKSMINTTGAVDSGSSSSSSSSSFVNGATSKNLPAVQTVAPMPEDSAENMSITAK
LERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSVVELVMLLCS
QEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEF
ESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAWGAVSHSQ
LHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVKSKKTFRSQAI
VNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLSITTTE
IHFEVDEDDSAFKKIDTKVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTALEVFMANRT
SVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQRRE
ISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALN
PKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFDH
PDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDL
PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEG
SVNLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQM
QQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGY
SLDQAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWD
KSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRH
HIIGDNPNSSECDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDL
LRALEGPENCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLS
SDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRALITGMASGSIV
AFNIDFNRWHYEHQNRY"
polyA_site 5106
BASE COUNT 1515 a 1083 c 1146 g 1381 t
ORIGIN
1 cactgattta ctatttgcat tagaaactga tgtacatgtt tggaggagcc attctacaaa
61 gtctgtaatg gattttgtca atagcaatga aaatattatt tttgtacata acacaattca
121 cctcatttcc caaatggtag acaacatcat cattgcttgt ggaggaattt tacctttgct
181 ctctgctgct acatcaccaa ctacggaatt ggaaaatatt gaagtgacac aaggcatgtc
241 agctgagaca gcagtaactt tcctcagccg gctgatggct atggttgatg tacttgtgtt
301 tgcaagctct ctaaatttta gtgagattga agctgagaaa aacatgtctt ctggaggttt
361 aatgcgacag tgcctaagat tagtttgttg tgttgctgtg agaaactgtt tagaatgtcg
421 gcaaagacag agagacaggg gaaataaatc ttcccatgga agcagtaaac ctcaggaagt
481 tcctcaaagt gtgactgcta cagcagcttc gaagactcca ttggaaaatg ttccaggtaa
541 cctttctcct attaaggatc cggatagact tcttcaggat gttgatatca atcgccttcg
601 tgctgttgtc tttcgggatg tggatgatag caaacaagca cagttcttag ctctggctgt
661 tgtttacttc atttcggttc tgatggtttc caagtatcgt gacatattag aaccccagag
721 agagactaca agaactggaa gccaaccagg tagaaacatc aggcaagaaa taaattcacc
781 aacaagtaca gaaacacctg ctgcatttcc agacaccata aaagaaaaag aaacaccaac
841 tcctggtgaa gatattcagg tagaaagttc aattccccat acagattcag gaattggaga
901 ggagcaagtg gctagcatcc tgaatggggc agaattagaa acaagtacag gccctgatgc
961 catgagtgaa ctcttatcca ctttgtcatc cgaagtgaag aaatcacaag agagcttaac
1021 tgaaaatcct agtgaaacgt tgaagcctgc aacatccata tctagcatta gtcaaaccaa
1081 aggcatcaat gtgaaggaaa tactgaaaag tcttgtggct gctccagttg aaatagcaga
1141 atgtggccct gaacctatcc catacccaga tccagcattg aagagagaaa cacaagctat
1201 tcttcctatg cagtttcatt cctttgacag gagtgttgtg gtgcctgtaa agaaaccacc
1261 tccaggtagt ttagctgtaa ccactgtggg agccactact gctggaagtg ggctgccaac
1321 aggcagtacc tctaatatat ttgctgctac tggagctaca ccaaaaagta tgattaatac
1381 aacaggtgcc gtggattcag ggtcctcctc ctcttcctcc tcttctagtt ttgtgaatgg
1441 tgctactagc aaaaaccttc cagctgtaca aactgttgct ccaatgccag aagattcagc
1501 tgaaaatatg agcatcactg caaaacttga aagagcgtta gaaaaagttg ctcctcttct
1561 tcgtgaaatt tttgtagact ttgccccatt cctatctcgt acacttcttg gcagtcatgg
1621 acaagagcta ttgatagaag gccttgtttg tatgaagtcc agcacatctg tggttgagct
1681 tgttatgctg ctttgttctc aggaatggca aaactctatt cagaagaatg caggacttgc
1741 atttattgag ctcatcaatg aaggaagatt actgtgccat gctatgaagg accatatagt
1801 ccgtgttgca aatgaagctg agtttatttt gaacagacaa agagccgagg atgtacataa
1861 acatgcagag tttgagtcac agtgtgccca atatgctgct gatagaagag aggaagaaaa
1921 gatgtgtgac catcttatca gtgctgctaa acatcgagat catgtaacag caaatcagct
1981 gaaacagaag attctcaata ttctcacaaa taaacatggt gcttggggag cagtttctca
2041 tagccaattg catgatttct ggcgtttgga ttactgggaa gatgatcttc gtcgaaggag
2101 acgatttgtt cgcaatgcat ttggctccac tcatgctgaa gcattgctga aagctgcaat
2161 agaatatggc acggaagaag atgtagtaaa gtcaaagaaa acattcagaa gtcaagcaat
2221 agtgaaccaa aatgcggaga cagaacttat gctggaagga gacgatgatg cagtcagtct
2281 gctacaggag aaagaaattg acaaccttgc aggcccagtg gttctcagca cccctgccca
2341 gctcatcgct cccgtggtgg tggccaaggg gactctctcc atcaccacga cagaaatcca
2401 cttcgaggta gatgaggatg attctgcctt caagaagatc gacacgaaag ttcttgcata
2461 cactgaggga cttcacggaa aatggatgtt cagcgagata cgagctgtat tttcaagacg
2521 ttaccttcta caaaacactg ctttggaagt atttatggca aaccgaacct cagttatgtt
2581 taatttccct gatcaagcaa cagtaaaaaa agttgtctat agcttgcctc gggttggagt
2641 agggaccagc tatggtctgc cacaagccag gaggatatca ttggccactc ctcgacagct
2701 ttataaatct tccaatatga ctcagcgctg gcaaagaagg gaaatttcaa acttcgaata
2761 tttgatgttc cttaatacta ttgcaggacg gacatataat gatctgaacc aatatccagt
2821 gtttccgtgg gtgttaacca actatgaatc agaagagttg gacctgactc ttccaggaaa
2881 cttcagggat ctatcaaagc caattggtgc tttgaacccc aagagagctg tgttttatgc
2941 agagcgttat gagacatggg aagatgatca aagcccaccc taccattata atacccatta
3001 ttcaacagca acatctactt tatcctggct tgttcgaatt gaacctttca caaccttttt
3061 cctcaatgca aatgatggaa aatttgatca tccagatcga accttctcat ccgttgcaag
3121 gtcttggaga actagtcaga gagatacttc tgatgtaaag gaactaattc cagagttcta
3181 ctacctacca gagatgtttg tcaacagtaa tggatataat cttggagtca gagaagatga
3241 agtagtggta aatgatgttg atcttccccc ttgggcaaaa aaacctgaag actttgtgcg
3301 gatcaacagg atggccctag aaagtgaatt tgtttcttgc caacttcatc agtggatcga
3361 ccttatattt ggctataagc agcgaggacc agaagcagtt cgtgctctga atgtttttca
3421 ctacttgact tatgaaggct ctgtgaacct ggatagtatc actgatcctg tgctcaggga
3481 ggccatggag gcacagatac agaactttgg acagacgcca tctcagttgc ttattgagcc
3541 acatccgcct cggagctctg ccatgcacct gtgtttcctt ccacagagtc cgctcatgtt
3601 taaagatcag atgcaacagg atgtgataat ggtgctgaag tttccttcaa attctccagt
3661 aacccatgtg gcagccaaca ctctgcccca cttgaccatc cccgcagtgg tgacagtgac
3721 ttgcagccga ctctttgcag tgaatagatg gcacaacaca gtaggcctca gaggagctcc
3781 aggatactcc ttggatcaag cccaccatct tcccattgaa atggatccat taatagccaa
3841 taattcaggt gtaaacaaac ggcagatcac agacctcgtt gaccagagta tacaaatcaa
3901 tgcacattgt tttgtggtaa cagcagataa tcgctatatt cttatctgtg gattctggga
3961 taagagcttc agagtttatt ctacagaaac agggaaattg actcagattg tatttggcca
4021 ttgggatgtg gtcacttgct tggccaggtc cgagtcatac attggtgggg actgctacat
4081 cgtgtccgga tctcgagatg ccaccctgct gctctggtac tggagtgggc ggcaccatat
4141 cataggagac aaccctaaca gcagtgagtg tgactatccg gcaccaagag ccgtcctcac
4201 aggccatgac catgaagttg tctgtgtttc tgtctgtgca gaacttgggc ttgttatcag
4261 tggtgctaaa gagggccctt gccttgtcca caccatcact ggagatttgc tgagagccct
4321 tgaaggacca gaaaactgct tattcccacg cttgatatct gtctccagcg aaggccactg
4381 tatcatatac tatgaacgag ggcgattcag taatttcagc attaatggga aacttttggc
4441 tcaaatggag atcaatgatt caacacgggc cattctcctg agcagtgacg gccagaacct
4501 ggtcaccgga ggggacaatg gggtagtaga ggtctggcag gcctgtgact tcaagcaact
4561 gtacatttac cctggatgtg atgctggcat tagagcaatg gacttgtccc atgaccagag
4621 ggctctgatc actggcatgg cttctggtag cattgtagct tttaatatag attttaatcg
4681 gtggcattat gagcatcaga acagatactg aagataaagg aagaaccaaa agccaagtta
4741 aagctgagag cacaagtgct gcatggaaag gcaatatctc tggtggaaaa aactcgtcta
4801 catcgacctc cgtttgtaca ttccatcaca cccagcaata gctgtacatt gtagtcagca
4861 accattttac tttgtgtgtt ttttcacgac tgaacaccag ctgctatcaa gcaagcttat
4921 atcatgtaaa ttatatgaat taggagatgt tttggtaatt atttcatata ttgttgttta
4981 ttgagaaaag gttgtaggat gtgtcacaag agacttttga caattctgag gaaccttgtg
5041 tccagttgtt acaaagttta agctttgaac ctaacctgca tcccatttcc agcctctttt
5101 caagctaaaa aaaaaaaaaa aaaaa
//