LOCUS BX640710 1586 bp mRNA linear HUM 17-APR-2005
DEFINITION Homo sapiens mRNA; cDNA DKFZp686O16217 (from clone DKFZp686O16217).
ACCESSION BX640710
VERSION BX640710.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1586)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (26-AUG-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686O16217) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..1586
/db_xref="H-InvDB:HIT000055259"
/organism="Homo sapiens"
/map="14q32.33"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686O16217"
/tissue_type="human rectum tumor"
/db_xref="taxon:9606"
CDS <1..1498
/codon_start=2
/gene="DKFZp686O16217"
/product="hypothetical protein"
/note="similar to immunoglobulin heavy chain variant"
/db_xref="InterPro:IPR003006"
/db_xref="InterPro:IPR003597"
/db_xref="InterPro:IPR003599"
/db_xref="InterPro:IPR007110"
/db_xref="InterPro:IPR013106"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036179"
/db_xref="UniProtKB/TrEMBL:Q6N041"
/protein_id="CAE45829.1"
/translation="HIPSLQKPLRGKFFTMDWTWRVFCLLAVAPGADSQVQLVQSGAD
VKKPGASVKVSCKASGYTFTNYFFHWVRQAPGQGPEWMGMINPRDGSTKYAQRFQGRV
SMTRDTSTSTIYMELSSLRSEDTAMFFCARAGPGYGTSASYYFDYWGQGTLVTVSSAS
PTSPKVFPLSLDSTPQDGNVVVACLVQGFFPQEPLSVTWSESGQNVTARNFPPSQDAS
GDLYTTSSQLTLPATQCPDGKSVTCHVKHYTNSSQDVTVPCRVPPPPPCCHPRLSLHR
PALEDLLLGSEANLTCTLTGLRDASGATFTWTPSSGKSAVQGPPERDLCGCYSVSSVL
PGCAQSWNHGETFTCTAAHPELKTPLTANITKSGNTFRPEVHLLPPPSEELALNELVT
LTCLARGFSPKDVLVRWLQGSQELPREKYLTWASQQEPSQGTTTYAVTSILRVAAEDW
KKGETFSCMVGHEALPLAFTQKTIDRMAGKPTHINVSVVMAEADGTCY"
regulatory 1523..1528
/regulatory_class="polyA_signal_sequence"
polyA_site 1542
BASE COUNT 362 a 518 c 434 g 272 t
ORIGIN
1 gcacatccct tctctacaga agcctctgag aggaaagttc ttcaccatgg actggacctg
61 gagggtcttc tgcttgctgg ctgtagctcc aggtgctgac tcccaggtgc agctggtgca
121 gtctggggct gacgtgaaga agcctggggc ctcagtgaag gtttcctgca aggcatctgg
181 atacaccttc accaactact tttttcactg ggtgcgacag gcccctggac aagggcctga
241 atggatggga atgatcaacc cccgtgacgg tagtacaaag tacgcacaga ggttccaggg
301 cagagtctcc atgaccaggg acacgtccac gagcacaatc tacatggagc tgagtagcct
361 gagatctgag gacacggcca tgttcttctg tgcgcgagcg ggcccaggat atggcaccag
421 cgcgtcctac tactttgact actggggcca gggaaccctg gtcaccgtct cgtcagcatc
481 cccgaccagc cccaaggtct tcccgctgag cctcgacagc accccccaag atgggaacgt
541 ggtcgtcgca tgcctggtcc agggcttctt cccccaggag ccactcagtg tgacctggag
601 cgaaagcgga cagaacgtga ccgccagaaa cttcccaccc agccaggatg cctccgggga
661 cctgtacacc acgagcagcc agctgaccct gccggccaca cagtgcccag acggcaagtc
721 cgtgacatgc cacgtgaagc actacacgaa ttccagccag gatgtgactg tgccctgccg
781 agttccccca cctcccccat gctgccaccc ccgactgtcg ctgcaccgac cggccctcga
841 ggacctgctc ttaggttcag aagcgaacct cacgtgcaca ctgaccggcc tgagagatgc
901 ctctggtgcc accttcacct ggacgccctc aagtgggaag agcgctgttc aaggaccacc
961 tgagcgtgac ctctgtggct gctacagcgt gtccagtgtc ctgcctggct gtgcccagtc
1021 atggaaccat ggggagacct tcacctgcac tgctgcccac cccgagttga agaccccact
1081 aaccgccaac atcacaaaat ccggaaacac attccggccc gaggtccacc tgctgccgcc
1141 gccgtcggag gagctggccc tgaacgagct ggtgacgctg acgtgcctgg cacgcggctt
1201 cagccccaag gacgtgctgg ttcgctggct gcaggggtca caggagctgc cccgcgagaa
1261 gtacctgact tgggcatccc agcaggagcc cagccagggc accaccacct acgctgtaac
1321 cagcatactg cgcgtggcag ctgaggactg gaagaagggg gagaccttct cctgcatggt
1381 gggccacgag gccctgccgc tggccttcac acagaagacc atcgaccgca tggcgggtaa
1441 acccacccac atcaatgtgt ctgttgtcat ggcggaggcg gatggcacct gctactgagc
1501 cgcccgcctg tccccacccc tgaataaact ccatgctccc ccaaaaaaaa aaaaaaaaaa
1561 aaaaaaagaa aaaaaaaaaa aaaaaa
//