LOCUS BX640695 2990 bp mRNA linear HTC 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp779I162 (from clone DKFZp779I162).
ACCESSION BX640695
VERSION BX640695.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2990)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany)
within the cDNA sequencing consortium of the German Genome Project.
This clone (DKFZp779I162) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp779I162
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..2990
/db_xref="H-InvDB:HIT000055244"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="779 (synonym: hncc1). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp779I162"
/tissue_type="liver"
/note="PDZ domain containing RING finger 4, N-terminus
truncated, not fully spliced"
/db_xref="taxon:9606"
CDS <263..2272
/codon_start=1
/gene="DKFZp779I162"
/product="hypothetical protein"
/db_xref="GOA:Q6ZMN7"
/db_xref="H-InvDB:HIT000055244.13"
/db_xref="HGNC:HGNC:30552"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR001841"
/db_xref="InterPro:IPR008974"
/db_xref="InterPro:IPR013083"
/db_xref="InterPro:IPR017907"
/db_xref="InterPro:IPR036034"
/db_xref="UniProtKB/Swiss-Prot:Q6ZMN7"
/protein_id="CAE45818.2"
/translation="CHSLHPMEHEFYEDNEYISSLPADADRTEDFEYEEVELCRVSSQ
EKLGLTVCYRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVA
LLSNDECKRIVLLVARPEIQLDEGWLEDERNEFLEELNLEMLEEEHNEAMQPTANEVE
QPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNSTSLKSK
RDLGQSQDTLGSVELQYNESLVSGEYIDSDCIGNPDEDCERFRQLLELKCKIRNHGEY
DLYYSSSTIECNQGEQEGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWT
LHDGGFRNYNTSIDMQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSS
LPRVINLTNKKNLRSTMAATQSSSGQSSKESTSTKAKTTEQGCSAESKEKVLEGSKLP
DQEKAVSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSM
CKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMS
EMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELS
HKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV"
BASE COUNT 1001 a 582 c 687 g 720 t
ORIGIN
1 gacatcagtc tttccacaga atacaactct gaccataggc ccttattcct agcattctct
61 cagaaattgc aaattgatgg acttcacgta gagggagaaa gaaaagctat tgcttttcct
121 cagctgtagt ttgtttaaag actagatcac tacagatctt attccaaagc agagcgaact
181 aaagtgaaat tctaaaatca gttttaatct ggaaaacaac ccatttaatc tattcctatc
241 atattgctac attccccata gctgccattc tctacatcca atggagcatg aattttatga
301 ggacaatgag tatatttcca gcttgcctgc tgatgcagac agaacagaag actttgaata
361 tgaggaggtc gagttgtgtc gtgttagcag tcaagagaag ctgggcctga cagtctgtta
421 ccgaacagat gatgaagaag acaccggcat ttatgtcagc gaggttgacc caaatagcat
481 tgctgccaaa gacggccgga ttcgagaagg ggatcggatt ttgcaaataa atggggaaga
541 tgtccagaat cgagaagaag cagtggcctt gctgtctaac gatgagtgta agagaatcgt
601 gctgcttgtt gcaaggccag agattcagct ggatgaaggc tggctggaag atgaaaggaa
661 tgaattctta gaggagttaa acttggagat gttggaagaa gagcataatg aagcaatgca
721 gcccactgcc aatgaggtgg agcagccaaa aaagcaagaa gaagaagaag gcacaacaga
781 cactgcaaca tcctcatcca acaaccatga gaaggacagt ggagtaggac gtacagatga
841 aagcttgcga aatgatgaga gctcagagca ggagaatgca gccgaagacc ccaatagcac
901 atctttgaag agcaagagag acctggggca gagccaagac actctgggaa gtgttgaact
961 tcagtacaat gagagcctcg tatctggtga atacattgac tcagactgca ttggcaaccc
1021 agatgaggac tgtgaaagat tcaggcagct cttggagctc aaatgcaaga ttcgaaatca
1081 tggagagtat gacctgtatt actcaagcag cacaattgaa tgcaatcaag gggagcaaga
1141 gggagtggag catgagctac agttgcttaa tgaagaactg agaaacattg agcttgagtg
1201 tcagaatatc atgcaggctc acaggctcca gaaagtgaca gaccagtatg gagacatctg
1261 gacattgcat gatggaggat tccggaatta taacaccagc atagatatgc aaaggggaaa
1321 gctagatgac atcatggagc atccagaaaa gtctgacaag gacagttcta gtgcttacaa
1381 cacagctgag agctgcagaa gtactccgct cactgtagac cgttcccctg acagttccct
1441 tccaagggtg atcaacctca ccaataagaa aaacctgaga agcacaatgg cagccaccca
1501 gtcctcttcc ggacagagca gtaaagagtc gacctccacc aaagccaaaa ccactgagca
1561 aggttgtagc gctgaaagca aggagaaggt tttagaaggc agcaagcttc ctgatcaaga
1621 gaaggcagtc agcgaacaca tcccttacct ctctccttac cacagctcct catatagata
1681 tgcaaacatc ccagcacacg cccggcatta tcaaagctac atgcagttaa ttcaacagaa
1741 atctgcagtc gagtatgctc agagtcagct cagcttggtg agcatgtgca aggagtctca
1801 gaagtgttca gagcccaaga tggaatggaa ggtgaaaatt aggagcgacg ggacacggta
1861 catcacaaag agacccgtgc gagaccgaat cctgaaggaa cgtgccttaa agatcaagga
1921 agagcggagt ggcatgacca cagacgatga caccatgagc gagatgaaaa tggggcgcta
1981 ctggagcaaa gaggagagaa agcagcacct ggttagggcc aaagagcagc gccgtcgccg
2041 tgagttcatg atgcgaagca ggttagagtg tctcaaggag agccctcaga gcggcagtga
2101 gggcaagaag gagatcaata tcattgaact gagtcacaaa aagatgatga aaaagagaaa
2161 caagaaaatt ttggacaact ggatgacaat ccaagaactg atgacccatg gggccaagtc
2221 tccagatggc acgagagtcc ataatgcctt cttgtcggtg accactgtat gaccgaatga
2281 atggaatgca tgcgactgat tttaggagga tgctaccagt ttcggtagag tatgattgcc
2341 tcgttcaatg tggcgttttt atatatattt tgtgactctt tatagtttaa attttttgta
2401 agcaaaaaat acctggtaat ttttcatttg tttttcatat actggtacct tctttttggc
2461 tgagatcttt cttttacttg tgatatattc atattactcg tttataaaaa atcaaaaaca
2521 aaaggaaaga aaacaaaaaa aacttgcaca aaaatactga ggagccaatt aatttcctac
2581 ttcaatgtat ctaatgtaag tgaaaatctg gatttatttc tctagtttac ttattttcta
2641 ctttaataat aactcaatgc caaaatattt ctatgcttgt ttcttggcat aatacatttt
2701 aaatcaaacc tgttcgtaat aaatcatgtg ccacatcttg tcttacacat aaaagccact
2761 gcttttaaca tcccattgta catttaacac ataaatggtg ttaacatccc attgtacatt
2821 taacacataa atggccattg tctttgtctc agtaaagtgt aggtggacaa tcttcctgtg
2881 atatgtagtg acattggtca tgtagctaga taattatggt aattgtgaca attaaagaga
2941 aataaattat tgattatcct tcagaaaaat taaaaaaaaa aaaaaaaaaa
//