LOCUS BX571749 1904 bp mRNA linear HTC 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686P04237 (from clone DKFZp686P04237).
ACCESSION BX571749
VERSION BX571749.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1904)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp686P04237) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686P04237
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..1904
/db_xref="H-InvDB:HIT000055140"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686P04237"
/tissue_type="small intestine"
/note="farnesoid-X-receptor beta"
/db_xref="taxon:9606"
CDS 26..1474
/codon_start=1
/gene="DKFZp686P04237"
/product="hypothetical protein"
/db_xref="GOA:Q7Z2W0"
/db_xref="H-InvDB:HIT000055140.14"
/db_xref="InterPro:IPR000536"
/db_xref="InterPro:IPR001628"
/db_xref="InterPro:IPR001723"
/db_xref="InterPro:IPR001728"
/db_xref="InterPro:IPR013088"
/db_xref="InterPro:IPR035500"
/db_xref="UniProtKB/TrEMBL:Q7Z2W0"
/protein_id="CAE11874.2"
/translation="MVMQFQGLENPIQISPHCSCTPSGFFMEMMSMKPAKGVLTEQVA
GPLGQNLEVEPYSQYSNVQFPQAQPQISSSSYYSNLGFYPQQPEEWYSPGIYELRRMP
AETLYQGETEVAEMPVTKKPRMGASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGF
FRRSITKNAVYKCKNGGNCVMDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRL
RKNVKQHADQTVNEDSEGRDLRQVTSTTKSCREKTELTPDQQTLLHFIMDSYNKQRMP
QEITNKILKEEFSAEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSA
VEAMFLRSAEIFNKKLPSGHSDLLEERIRNSGISDEYITPMFSFYKSIGELKMTQEEY
ALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTEL
RTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ"
BASE COUNT 631 a 353 c 412 g 508 t
ORIGIN
1 ttcagtggct gtgaataagc taagaatggt aatgcagttt caggggttag aaaatccaat
61 tcaaattagt cctcactgca gctgtacgcc gtcaggattt ttcatggaaa tgatgagtat
121 gaagcccgcg aaaggtgttt taacagaaca agtggcaggt cctctgggac agaacctgga
181 agtggaacca tactcgcaat acagcaatgt tcagtttccc caagctcaac cacagatttc
241 ctcgtcatcc tattattcca acctgggttt ctacccccag cagcctgaag agtggtactc
301 tcctggaata tatgaactca ggcgtatgcc agctgagact ctctaccagg gagaaactga
361 ggtagcagag atgcctgtaa caaagaagcc ccgcatgggc gcgtcagcag ggaggatcaa
421 aggggatgag ctgtgtgttg tttgtggaga cagagcctct ggataccact ataatgcact
481 gacctgtgag gggtgtaaag gtttcttcag gagaagcatt accaaaaacg ctgtgtacaa
541 gtgtaaaaac gggggcaact gtgtgatgga tatgtacatg cgaagaaagt gtcaagagtg
601 tcgactaagg aaatgcaaag agatgggaat gttggctgaa tgcttgttaa ctgaaattca
661 gtgtaaatct aagcgactga gaaaaaatgt gaagcagcat gcagatcaga ccgtgaatga
721 agacagtgaa ggtcgtgact tgcgacaagt gacctcgaca acaaagtcat gcagggagaa
781 aactgaactc accccagatc aacagactct tctacatttt attatggatt catataacaa
841 acagaggatg cctcaggaaa taacaaataa aattttaaaa gaagaattca gtgcagaaga
901 aaattttctc attttgacgg aaatggcaac caatcatgta caggttcttg tagaattcac
961 aaaaaagcta ccaggatttc agactttgga ccatgaagac cagattgctt tgctgaaagg
1021 gtctgcggtt gaagctatgt tccttcgttc agctgagatt ttcaataaga aacttccgtc
1081 tgggcattct gacctattgg aagaaagaat tcgaaatagt ggtatctctg atgaatatat
1141 aacacctatg tttagttttt ataaaagtat tggggaactg aaaatgactc aagaggagta
1201 tgctctgctt acagcaattg ttatcctgtc tccagataga caatacataa aggatagaga
1261 ggcagtagag aagcttcagg agccacttct tgatgtgcta caaaagttgt gtaagattca
1321 ccagcctgaa aatcctcaac actttgcctg tctcctgggt cgcctgactg aattacggac
1381 attcaatcat caccacgctg agatgctgat gtcatggaga gtaaacgacc acaagtttac
1441 cccacttctc tgtgaaatct gggacgtgca gtgatgggga ttacagggga ggggtctagc
1501 tcctttttct ctctcatatt aatctgatgt ataactttcc tttatttcac ttgtacccag
1561 tttcactcaa gaaatcttga tgaatattta tgttgtaatt acatgtgtaa cttccacaac
1621 tgtaaatatt gggctagata gaacaacttt ctctacattg tgttttaaaa ggctccaggg
1681 aatcctgcat tctaattggc aagccctgtt tgcctaatta aattgattgt tacttcaatt
1741 ctatctgttg aactagggaa aatctcattt tgctcatctt accatattgc atatatttta
1801 ttaaagagtt gtattcaatc ttggcaataa agcaaacata atggcaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//