LOCUS BX571745 10029 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686L12109 (from clone DKFZp686L12109).
ACCESSION BX571745
VERSION BX571745.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 10029)
AUTHORS Lauber J., Bahr A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German Human cDNA Consortium
JOURNAL Submitted (16-JUL-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686L12109) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..10029
/db_xref="H-InvDB:HIT000055136"
/organism="Homo sapiens"
/map="2q13"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686L12109"
/tissue_type="human fetal kidney"
/db_xref="taxon:9606"
CDS 51..1037
/codon_start=1
/gene="DKFZp686L12109"
/product="hypothetical protein"
/note="nephrocystin, not fully spliced"
/db_xref="GOA:Q7Z2W3"
/db_xref="H-InvDB:HIT000055136.15"
/db_xref="InterPro:IPR001452"
/db_xref="InterPro:IPR030642"
/db_xref="InterPro:IPR036028"
/db_xref="InterPro:IPR039687"
/db_xref="UniProtKB/TrEMBL:Q7Z2W3"
/protein_id="CAE11870.1"
/translation="MLARRQRDPLQALRRRNQELKQQVDSLLSESQLKEALEPNKRQH
IYQRCIQLKQAIDENKNALQKLSKADESAPVANYNQRKEEEHTLLDKLTQQLQGLAVT
ISRENITEVGAPTEEEEESESEDSEDSGGEEEDAEEEEGEKEENESHKWSTGEEYIAV
GDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYSEEEEGQE
SSEEGSEEDVEAVDETADGAEVKQRTDPHWSAVQKAISEAGIFCLVNHVSFCYLIVLM
RNRMETVEDTNGSETGFRAWNVQSRGRIFLVSKPVLQVTFLISFFFFFVQKE"
regulatory 9984..9989
/regulatory_class="polyA_signal_sequence"
polyA_site 10002
BASE COUNT 2956 a 1951 c 2204 g 2918 t
ORIGIN
1 gggttggttt ccctggcaac tggagcaatc agagcaccgc agccagggag atgctggcga
61 gacgacagcg agatcctctc caggccctgc ggcgccgcaa tcaggagctg aagcaacagg
121 ttgatagttt gctttctgag agccaactga aagaagctct agaacccaat aaaagacaac
181 atatttatca aagatgtatc cagttaaagc aggcaataga tgaaaataaa aatgctcttc
241 aaaaattaag caaagctgat gaatctgcac ctgttgcaaa ctataatcag agaaaagaag
301 aggagcatac tcttttggac aagcttaccc aacaactgca gggccttgct gtgacaataa
361 gcagagaaaa tataactgaa gttggggcac ctactgaaga agaggaagaa agtgaaagtg
421 aagatagtga agacagtggt ggggaggaag aagatgcaga ggaggaagag ggagagaaag
481 aggaaaatga atctcacaaa tggtcaaccg gtgaagaata catcgctgtt ggagatttta
541 ctgctcagca agttggagat cttacattta agaaagggga aattctcctt gtaattgaaa
601 aaaaacctga tggttggtgg atagctaagg atgccaaagg aaatgaaggt cttgttccca
661 gaacctacct agagccttat agtgaagaag aagaaggcca agagtcaagt gaagagggca
721 gtgaagaaga tgtagaggcg gtggatgaaa cagcagatgg agcagaagtt aagcaaagaa
781 ctgatcccca ctggagtgct gttcagaaag cgatttcaga ggcgggcatc ttctgtcttg
841 ttaatcatgt ctcgttttgc tacctaatag ttctgatgcg aaataggatg gagactgtgg
901 aagacaccaa tggatctgaa acagggttca gggcatggaa tgtacagagc agaggacgta
961 tatttctggt ttctaagcct gtgctccaag taacatttct cattagtttt tttttttttt
1021 ttgtacaaaa agaatagata attcatggtg tcacttgagg acttggaaac attctcattg
1081 atcctgcttt cctatcattt gagtggaaac agatgttaaa ttttatttac tattcgaaaa
1141 atcctgaaag cctttaataa aaagtaagaa attggccagg catggtgatt cacactggta
1201 atcccaacat tttgggaagc tgaagcagga ggatcacttg aggccaggaa ttcaagacca
1261 gcttgagcaa catagtgaga ccctatccta caaaaaataa gaaaaattag ccaggtgtgg
1321 tggctcatgc ctgtagtccc agctactcgg gaggctgagg tgggaggatt gcatgagttt
1381 gggaagtcaa ggctgtagtg agctgtgatt gtgccactgc actccagagc atgagtgaca
1441 gggcaagacc ctgtcttaaa aaaaaaaagg taattaatta cattttttta aaggagaaat
1501 gatccataat tctgtcatta aaaaaaaatt acaggccggg cacagtggct catgggcaca
1561 gtggctcaca cctgtaatcc cagcactttg ggaggccaag gcgggtggat cacctggggt
1621 caagagttca agaccagcct agtcaacaca gcgaaacctc acctcgacta aaaatagaaa
1681 aattagctgg gcgtggtagc gcatgtctgt agtcccagct cctggggagg ctgaggcagg
1741 agaattgctt gaacctggga ggcggaggtt gcagtgagcc gagaatactc cactgtactc
1801 cagcctgggc gacagagtga gactccgtct caaaaaacaa aaaaataatt acatagccaa
1861 atgaaaattc tcttcctcaa actcataagt aatcaccatt aacaatttag tacgtgtcct
1921 tcctgacctt tttcgttatt tattacttat aagtacatcc ttgtatgtgt gagggtgtgt
1981 gtctatgagt agtgtgtatg tgtatacaaa aaaaatccat taattcttca gtgcatgtga
2041 tttgccaata gacattaact tacctgtgaa atggaagcgc agggtggagc aggacaggag
2101 cagggacatt ttgataaggg tatacttgaa gcagctgctc cggaacacac agctctgcac
2161 gctgggcact gtatggggct taggtcctta ggagaggcca gggtgctgtg atgacatcct
2221 ctcaggaatt tggggccaaa tcgtattatt cttccactaa agtctgtatg tttatatttt
2281 tcttttttgg gttatagtta ctctagtgat aaagtattat agagatgcag aaacatgact
2341 gaaaacaaat ccattttgat gttactgtct tcagcagata aacactgttg atgtgttaac
2401 tacgatggga gctattcctg cagggttcag gccttccacg ctctcacagc ttctggagga
2461 agggaatcaa tttcgagcaa attacttctt acaaccagag ctcatgcctt cacaactggc
2521 cttcagagat ctgatgtggg atgctacaga aggcactatt aggtcgagac caagtcgtat
2581 ttcattgatt ctgacattat ggagctgtaa aatgattcct cttccaggaa tgagcataca
2641 ggttctcagc agacatgtac gcctctgtct atttgatggt aataaggttc tgagcaacat
2701 tcatacagtc agagccacat ggcaacctaa aaagcccaaa acatggacct tttctcccca
2761 ggttactcgc atcttaccat gtttgcttga tggtgattgc tttatcaggt ctaattctgc
2821 atctccagat cttggaatat tatttgaact tggaatttct tatattcgca attcaactgg
2881 tgaaagagga gagttaagct gtggctgggt gtttcttaaa ctttttgatg ccagtggagt
2941 tcctattcca gcaaatactt atgagctttt cttgaatggt ggtactcctt atgaaaaagg
3001 tattgaagtg gacccttcaa tatccagaag aggtatggct ctcatgtgtt gtcttccttt
3061 ccttaaagat taaacaaata gaagcatctg agaggtagct acattctaat aagcatagcg
3121 ttttttactt gaattcacac ttttaaaaat atgtcatttg atataaaaat tttaatcatt
3181 tttaagtact tattttcttg gtaacacata tgagactcta agacatcatg aagaatgaaa
3241 tcatgaagaa tgagaactaa tgcattagtt ccttttcatt gaccactgaa ctgatacttg
3301 tgactaatac agagactgcc tattgctggg tcaaaggatg cagacatttg aaacagtaat
3361 atgcatgcca aattgccctc tagaaatatt gagcatcttt tactatgttc attaaccagg
3421 cactgtgcta gataatggga gaatgaagag caagacagat atggtcattg cctcatgggg
3481 ctcagagcct gacagatttg gaattccatt tccactcctc agccacccct ctatttgttt
3541 ggtgattcaa gacatgccac ctctgctgac cccacaacgc cagtcctgcc ttcttggaac
3601 agaaaggagt ttggggtctg ggatgcagtt ggttctacct ggagtcagac atgctgtttt
3661 cctttgtaat ctggcagcaa taatgctgta actcatgtga tttagcaaac aatcctgtgc
3721 ccttagggag gtctctcagc tcatttaggg tatatggatg actcttgcct ttcattcaat
3781 tcagcactac tgggtggtat attttcatga aatacttgtt ttattatact cactgtctca
3841 agtacttaaa gtttcgtgag ttacttttga tttttcttaa aagcacacgg cagtgttttc
3901 taccagatta tgacaatgag aaggcagcct caacttctag tgaaactgag atccttgaac
3961 agaagatcaa gaaatgtact aagtctactg ccagaaacat taattggaaa tatgtgttct
4021 attcacttgt tgatatttta tcgacaaatt cttggagatg tgctcctgaa agacaggatg
4081 agcttgcaaa gtactgattt aattagccat cccatgctgg ccaccttccc catgctcttg
4141 gagcagcctg atgtgatgga tgctctcagg gtgggtagca tgcattgcaa tggaaacctg
4201 ctggcttatg gaagcagtta tacactctgt gttaatgagt tctgtctagg cctttttttt
4261 tgttactagg atgatgtctc ccaatcccta tccattgtct aggtaactca gtcctcatct
4321 ttcccatctt agcataaatt cccaagggct gccttccctg acccagggag caggtggagt
4381 gcctgctatg tacactattg caatctttgc ccattttttc cttgacttag gatggccact
4441 gattgtgtcc taagagcaaa aatccaaaat ggtctgtaag ataaatcaat tgaatttgca
4501 ggggagaatc agggcatgca catcatcttt aattccatgt gtgctgtttg ctgtctgaaa
4561 taactgttga gtgttatgtt aaatcgtatg aaatctccaa ttttcagcca tttttggcct
4621 aagtggcagt ttcatatggt ttagcctaat acatcagggt caataagtag aagagctgca
4681 tgcatgcaag gcagatacac aggtaacatc acaagtgcca tgggggaggt ataacccagg
4741 accttgaaga tttaaagaag gcagcaaaga aggatccaaa ttctgtttca ctagagaggt
4801 cctgcatgag agagcctaat aaaggtcagg gccaagagga ttttgacctg ctgagatggg
4861 ggtgaagacg ttgcaggtag aaggcttagc atgagcagac gtttgaggca ggaaggaata
4921 gagctgacag tccagcttgg catgtcagat gcaagtaagg gagtggttgg tagatgggca
4981 aggtaagcct gagtctcggt gtggggctga gggcggtggt aggtggtggg taacccagga
5041 aggtttcttc tttaggcaaa ctctgccaag tgcaaagagg cagaacatgt gcaggaggga
5101 ggtgagcata ttagggggtg actcctgctg ataaaaacta ggccatatgc acctgacagc
5161 agaaacagaa ggaggactca gtcatctaca aagattctta ttagactttg aaaccaattc
5221 atatgctagc ttggctgggt tggggggtgt caatagtaat aatgacattt tcaacagaga
5281 tgtttaagaa aatgttcatg gtacatatga tctcctgtaa ttttagataa gttcgtctgg
5341 cactatagct agataatgca gaatttctct ttcttctcct ataaagtcac tagtatcata
5401 ataattattc attacacaga acatatatac actgattctt caacaaagat ttcacaagag
5461 cctactatgt attaatataa ggcactgtgc tggccacagg aatatttccc taggtgtgta
5521 acaggaatct gcaccttgtt cttaggagga aacttaggat ccctaatcta gtctaaaatc
5581 tgcatttccc tgatgagcag acagcttgga gatgtgcagt gacttggccg gccatggagc
5641 tcagccatga cccagccggg gctgtccctg cgggtcagct ctgggtgcac ccagaatgtg
5701 ccacgggctg cttgaaagca tgagggtaaa gttgtgcaca tatgttattt agcaaaaaga
5761 ccccatttga gccataataa gtataaatat atatacattt atatacctgc ctgtgaaaag
5821 atctggaaga atatattcca gagaggtatt ggtgaatatc tctggatctt ggattatttt
5881 atctacattt tcttaatttt ttcacattga attatttgtg ttatgataat tttaaaaaag
5941 aaagtggtgg ttgtttctgc acccatgagc cttcttctct ccgtggcata gtgtattact
6001 taggagaagc ttggctgtgc tgtggtggtt agcacaggtt tatttcttac ccatggtatg
6061 tatccagcat ggatcagtgg aagatgctgc tccacagtca cccaagggta caggctggtg
6121 gagcctctac tgtctcacag caccatctgg aacaagtagc tgcctctgtt gccagtttcc
6181 ctgcagaaga gggagaatgg agaattgttc ttgggctttc actgcctttg cttcaaaggg
6241 gcctgggcca cttctgctca cattgcattg gccaaaacca gtcacacggt ccatttaact
6301 tcaaaggagg tatagtcttc tttttgttcc agaagaaagg aagtggatct tggtgaggta
6361 atagtgacct ttaacacgtt tgctattccc aaatgagtta ctctaagtga aacatcctac
6421 tatttgctgg tggctgaatg aaaaataagg tgggacattg acatgtaact aacaaaaata
6481 gacaaatttt accagacact aagtctacat ttgctaagtg atactcacgt taaaccatat
6541 tattaggttg gtgcaagaga actgtggttt ttgccataaa agtagtagca aaaaccacaa
6601 ttacttttgc accaactgaa taaaatttaa aatgtacagc atgtgagcct cctagagttt
6661 acttacctag cacagttcag tttgtggatg acattttaat aataagaaga atggcacttg
6721 gcctgtttag taaaacactc tggttctgta agggtcctct tcaaactcct aaggacccat
6781 agcacagcag ttaatagggt ggaggaccat agtcccctca cgtggtaata ggtatgaaca
6841 ttccaaaatg ttctcatgag tggcatagtc tgttatctcc tgctgagaaa cgctctatca
6901 atgcatcatt tattttatgg agaatctctt tattggtgcc atatgttatg ttcatcccag
6961 ggcctccctg ctgagaaagg tctgatgctt tcaggttact catgatatca ggtgccaaca
7021 ggaggatatc tactgacatg cacagaaccc agaccctgga acaggcagcc gtgagactgg
7081 tcatattcca cccacgcatt cagtttgcca ggaaatggca cagtgaaagt cttaaattca
7141 tacttctgtg ggactaattg aactctgggg tttttattta tttgaggaaa tttctgtgga
7201 gccctgtgga cagattagaa atatttactc acaaaattgt acttcagtct gtctcattct
7261 gaccattgtc atcatcatga cagagagaat tgtagaaaag tttggtattt ggcagtgttt
7321 tctattttca ttactgtctt acttggaaag cttaatacta ttttattatt caggtgctgt
7381 ggttgtatag ttttcatgga tgtgttagtg tttcgctgat tctattctta agttagtttt
7441 gatttataat tatcatgggc ttctacggca tttttcacag atacatctgc ctggtcattc
7501 tggtgctggg tcatttgcaa tagattccta attacagatt cacttcttgc ttgtatagaa
7561 tctgtacagc atttttaacc ctgtccataa gtttatttac agagtagatt tgcataagtg
7621 ttgcaaggac ttgttactac ttggactaac ataatatttc tgtttgctct ttagagttcg
7681 tgggctggaa aagaaagcac attaaaaaga tcagagaagg taaaatatga gtctccacac
7741 tgaactccat atttgcagta cctggtgttt gcttgcctat tctaatcatg tctctttttt
7801 agcaaaagta gccatagtca taatccctct taaccaggga aactgtttca ttatggctgc
7861 aaaaacacat tccaagaggg ttacgcatga tcgttagcta atgtgagaag gaatacttgt
7921 tcaagacagc catttcaggt tactgagttt tatttaaata aaggggaagt ttctaagcca
7981 aagtctctca gttgtgtatc aaatttcttt tatttttaaa aaacttctct agctctcaaa
8041 gcctgtatca ccaagagaag ggaaaaaaaa atggcctgag ctgtaccata tattgaaaac
8101 aatgcattgc tcctgcttac cttgctataa aatcatggta attaccaatc cgaacttgct
8161 ttaatcggtg agtcgtggtt tgactgctct catccaggat ttggcaaatg ggaagggcta
8221 tagatggaaa atcttcttgg cttttcaggt cttgtggtct ctgtcacact actcagctct
8281 ggtgttgtaa cacaaaagca gccacagaca atatgtaaat gaccaaatgt gactgttttc
8341 ctataaaact ttatttatga aaagaggtga gagtccacat ttggcccaca gtccatactt
8401 taccagtcct gatctaaagt attcattatc tacaaggaaa atgaagtaac aaatgagctg
8461 aaaaccctaa aaattaggaa acaatttata cattgtatcc ttatttcagc ctccatttga
8521 tcagtaccat ctacatacat gtgactttgc caaaactgcc aggcttagtg ctattctagt
8581 acagcagcct tgggcctgta gacattgccc ttatgtggac atgtgtggtg ggatgggtga
8641 tatctctgtg tagactctgc tgcctgtgga cagctctgcc ctcaacttgc tgtgctctct
8701 gagattccca ccatggcctg tgggcatcgg ggcttgacat gggtacagct gatgctgcac
8761 cattcttatc tgtgaagggt ctgacatcct catcaccaaa ggacccctcg acctccatcc
8821 caggcattgc tggaaataag ccaacaactc tggatcctat gcagaacacc tgctacaatt
8881 atcttagata acatgacagt tacctctgat atgctgtcag taagtaggtt cagctgactt
8941 ggcattgttt tagttatatt tacccctaac cacactggtg tcaccaaaat tagactgcaa
9001 taccttgaca gaatgtgtga gacaccctcc atggagctta ggagacaccc tggtctcatg
9061 gagccacgta gaggctctca gggagaactg ctccactgta ctctgtgtaa ctctgctcac
9121 ttccacttct gaagtgccat gtcctgcctg agcagctggc tcagagccga tacctgccag
9181 gcactaatgg caccctccat cctacctctt aggtggcttt tagttaatag agttcacaga
9241 atttaacact ttaaaaataa caatgttatt tgtgggggtg gtgttttccc agagagacaa
9301 agagttcctg aagtccacgt ttctcctggt ttaccatgac tgcgtgctcc cacttctcca
9361 ctccacacgc ctacccccac tcaggtgggc agaagaagag actgagactg cacggtggaa
9421 agttatcact gacttcctta agcaaaacca agaaaaccag ggcgccctcc aagctctgct
9481 gtcaccagac ggagttcatg aaccttttga cctttcagag cagacctatg acttcttggg
9541 tgaaatgaga aagaatgcag tgtgacagtg gcagcctcta gccctcagct tcccacggaa
9601 tcagatggat cctccacgat tacgtgaata aaatgatgga accaaaaatc actgtcactt
9661 tacaacttag gttttactct tttctttcta cagaccatat ttttaaagaa atgtttatac
9721 aataatttaa atatttttta aaaccataaa ataaattttt ataaggaata ctgttatatc
9781 taaatttaaa cagtatttat tttttcaaaa acagctactt aagttaatgg tatagatttc
9841 tataaaagca agattttgcc aaaaactaaa tttatgatta ttcaagaaag tgaaaaaaac
9901 aacctacaga atgggaaaac atatttgcaa atcatctaac tgataaaggt ctagtatcca
9961 aaatatttaa atttatgagt gttaataaaa tttatcttgt tcaatgaaaa aaaaaaaaaa
10021 aaaaaaaaa
//