LOCUS BX538347 2340 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686H1983 (from clone DKFZp686H1983).
ACCESSION BX538347
VERSION BX538347.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2340)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp686H1983) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2340
/db_xref="H-InvDB:HIT000055129"
/organism="Homo sapiens"
/map="2p13.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686H1983"
/tissue_type="human retina"
/db_xref="taxon:9606"
CDS 72..>797
/codon_start=1
/gene="DKFZp686H1983"
/product="hypothetical protein"
/note="similar to HIRA-interacting protein 5,
differentially spliced, not fully spliced"
/db_xref="H-InvDB:HIT000055129.14"
/protein_id="CAD98142.1"
/translation="MAATARRGWGAAAVAAGLRRRFCHKLKNPYTIKKQPLHQFVQRP
LFPLPAAFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQ
LFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGE
AGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSII
TLKNGIQNMLQFYIPEVEGVEQVC"
regulatory 2297..2302
/regulatory_class="polyA_signal_sequence"
polyA_site 2317
BASE COUNT 658 a 447 c 489 g 746 t
ORIGIN
1 accggccagc ctgcggctgc gcagatcttt cgtggttctg tcagggagac ccttaggcac
61 tccggactaa gatggcggcg acggccaggc ggggctgggg agctgcggct gttgccgccg
121 ggctgcgcag gcggttctgt cataagttga agaatccata caccattaag aaacagcctc
181 tgcatcagtt tgtacaaaga ccacttttcc cactacctgc agccttttat cacccagtga
241 gatacatgtt tattcaaaca caagataccc caaatccaaa cagcttaaag tttataccag
301 gaaaaccagt tcttgagaca aggaccatgg attttcccac cccagctgca gcatttcgct
361 cccctctggc taggcagtta tttaggattg aaggagtaaa aagtgtcttc tttggaccag
421 atttcatcac tgtcacaaag gaaaatgaag aattagactg gaatttactg aaaccagata
481 tttatgcaac aatcatggac ttctttgcat ctggcttacc cctggttact gaggaaacac
541 cttcaggaga agcaggatct gaagaagatg atgaagttgt ggcaatgatt aaggaattgt
601 tagatactag aatacggcca actgtgcagg aagatggagg ggatgtaatc tacaaaggct
661 ttgaagatgg cattgtacag ctgaaactcc agggttcttg taccagctgc cctagttcaa
721 tcattactct gaaaaatgga attcagaaca tgctgcagtt ttatattccg gaggtagaag
781 gcgtagaaca ggtatgccaa tattatatga cagtctagat ttttttttta aaaaaaaaaa
841 ccttactttg ttccattatc atctatatgc cttaaaaaat tatgttagtt gatactttgg
901 tggattgact gaggaacatt tttattcaat tgtccagggt agggtgatga attggccttc
961 agattagaaa cttgaattgg catctaattg tagtaggtgt gatgaggaga aaaaaacatt
1021 cttaggttta tgtaactttt tccttctcca atggagttag tctgttatct tagtaataca
1081 ttaactcatg gaaagataat agctgttgta acattttcct gaggcttaaa atgatctttt
1141 atctcagtaa gactaaaata attagttcct aatatggtgg ggtttttttt gttttgtttt
1201 gttttttact ttccttgggg attcatttta ataaaaataa atgtttttaa aataacaatt
1261 tggtatagct tcacagaata tatttaagta aataagatgg ttttgaaaaa aagaaaaagt
1321 catttacatt agtcttatgg ctagagaata ccagttaaat tgtttttttt ttttttgaga
1381 cggagtcttg ctctatcacc aagccggagt gctctatcac caggcactag gctcactgca
1441 acctccacct ccccagttca tgccattctc ctgcctcagt ctcccgggta cctgggacta
1501 caggcgccca ccaccacgac cggctaattt tttgtatttt tagtagagac ggggtttcac
1561 tgtgttagcc aggatggtct tgatcttctg ccctcatgat ctgcccgcct cagcctccca
1621 aagtgctggg attacaggcg tgagccaccg cgcctggccc cagttaatta tttatagtct
1681 tttctgccca gctgagactc tgctatgggt agcctctttg agacaaggag aagtgatcaa
1741 tgctttaatt aatttccaaa tatttaattt gcttttattt tattttattt tttttttgag
1801 acagagtctc gctgtgttgc ccacgctgga gtgcagtggc gcgatctcgg ctcactgcaa
1861 gctctgcttc ccaggttcac gccatcctcc tgcctcagcc tcccgagtag ctgggactac
1921 aggcgcccgc ctggctaatt ttttgtattt tcagtagaga tggggttgct tttatgtttt
1981 taggataccg ggttatgatt caaaccttgt tctttggggc tgttgataga tttattctta
2041 ctggcttgtc atgcctcatt atagagtgta tcaggtaaag aagtaatatt aaaatcagga
2101 aaacagcaaa atctaatcat tttcttaatt cttaaattgt ctttgttttt tggttttagg
2161 ttatggatga tgaatcagat gaaaaagaag caaactcacc ttaaaataat ctggattttc
2221 tttgggcata acagtcagac ttgttgataa tatatatcaa gtttttatta ttaatatgct
2281 gaggaacttg aagattaata aaatatgctc ttcagagaat gaaaaaaaaa aaaaaaaaaa
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