LOCUS BX538317 6949 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686A02165 (from clone DKFZp686A02165).
ACCESSION BX538317
VERSION BX538317.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6949)
AUTHORS Lauber J., Bahr A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686A02165) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..6949
/db_xref="H-InvDB:HIT000055099"
/organism="Homo sapiens"
/map="1q25.2"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686A02165"
/tissue_type="human uterus endothel primary cell culture"
/db_xref="taxon:9606"
CDS <1..3279
/codon_start=1
/gene="DKFZp686A02165"
/product="hypothetical protein"
/note="tyrosine kinase arg gene, differentially spliced"
/db_xref="GOA:P42684"
/db_xref="H-InvDB:HIT000055099.14"
/db_xref="HGNC:HGNC:77"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR000980"
/db_xref="InterPro:IPR001245"
/db_xref="InterPro:IPR001452"
/db_xref="InterPro:IPR008266"
/db_xref="InterPro:IPR011009"
/db_xref="InterPro:IPR015015"
/db_xref="InterPro:IPR017441"
/db_xref="InterPro:IPR020635"
/db_xref="InterPro:IPR035837"
/db_xref="InterPro:IPR036028"
/db_xref="InterPro:IPR036860"
/db_xref="PDB:2ECD"
/db_xref="PDB:2KK1"
/db_xref="PDB:2XYN"
/db_xref="PDB:3GVU"
/db_xref="PDB:3HMI"
/db_xref="PDB:3ULR"
/db_xref="PDB:4EIH"
/db_xref="PDB:5NP3"
/db_xref="PDB:5NP5"
/db_xref="UniProtKB/Swiss-Prot:P42684"
/protein_id="CAD98092.1"
/translation="KHWVSTQSGHYGGLFTQNSLTFVLLGRGMVLGTVLLPPNSYGRD
QDTSLCCLCTEASESALPDLTDHFASCVEDGFEGDKTGGSSPEALHRPYGCDVEPQAL
NEAIRWSSKENLLGATESDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWSE
VRSKNGQGWVPSNYITPVNSLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPG
QLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYPA
PKCNKPTVYGVSPIHDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE
DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE
EVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD
TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY
DLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHDSSISEEVA
EELGRAASSSSVVPYLPRLPILPSKTRTLKKQVENKENIEGAQDATENSASSLAPGFI
RGAQASSGSPALPRKQRDKSPSSLLEDAKETCFTRDRKGGFFSSFMKKRNAPTPPKRS
SSFREMENQPHKKYELTGLPEQDRMAMTLPRNCQRSKLQLERTVSTSSQPEENVDRAN
DMLPKKSEESAAPSRERPKAKLLPRGATALPLRTPSGDLAITEKDPPGVGVAGVAAAP
KGKEKNGGARLGMAGVPEDGEQPGWPSPAKAAPVLPTTHNHKVPVLISPTLKHTPADV
QLIGTDSQGNKFKLLSEHQVTSSGDKDRPRRVKPRCAPPPPPVMRLLQHPSICSDPTE
EPTALTAGQSTSETQEGGKKAALGAVPISGKAGRPVMPPPQVPLPTSSISPAKMANGT
AGTKVALRKTKQAAEKISADKISKEALLECADLLSSALTEPVPNSQLVDTGHQLLDYC
SGYVDCIPQTRNKFAFREAVSKLELSLQELQVSSAAAGVPGTNPVLNNLLSCVQEISD
VVQR"
polyA_site 6930
BASE COUNT 1934 a 1513 c 1628 g 1874 t
ORIGIN
1 aagcactggg tatcaacgca gagtggccat tatggggggc tctttacaca gaacagttta
61 acttttgtgc ttctgggcag aggtatggtc cttgggacag ttctccttcc acctaatagt
121 tatggcagag atcaggacac ttcactttgc tgcctgtgca ctgaggcctc agaatctgct
181 ctacccgact taacagatca ctttgccagc tgtgtggagg atggatttga gggagacaag
241 actggaggca gtagtccaga agctttgcat cgtccctatg gttgtgatgt tgaaccccag
301 gcactaaatg aggctatcag gtggagctcc aaggagaact tgctcggagc cactgagagt
361 gaccctaatc tcttcgttgc actttatgat tttgtagcaa gtggtgataa cacactcagc
421 atcactaaag gtgaaaagct acgagtcctt ggttacaacc agaatggtga gtggagtgaa
481 gttcgctcta agaatgggca gggctgggtg ccaagcaact acatcacccc agtgaacagc
541 ctggaaaaac actcctggta ccatggacct gtgtcacgca gtgcagctga gtatctgctc
601 agcagtctaa tcaatggcag cttcctggtg cgagaaagtg agagtagccc tgggcagctg
661 tccatctcgc tcaggtacga gggacgtgtg tatcactaca ggatcaatac cactgcagat
721 ggcaaggtgt atgtgactgc tgagagccgc ttcagcacct tggcagagct tgtacaccat
781 cactccacag tggctgatgg gctggtgaca acattacact acccagcacc caagtgtaat
841 aagcctacag tctatggtgt gtcccccatc cacgacaaat gggaaatgga gcgaacagat
901 attaccatga agcacaaact tgggggcggt cagtatggag aggtttacgt tggcgtctgg
961 aagaaataca gccttacagt tgctgtgaaa acattgaagg aagataccat ggaggtagaa
1021 gaattcctga aagaagctgc agtaatgaag gaaatcaagc atcctaatct ggtacaactt
1081 ttaggtgtgt gtactttgga gccaccattt tacattgtga ctgaatacat gccatacggg
1141 aatttgctgg attacctccg agaatgcaac cgagaagagg tgactgcagt tgtgctgctc
1201 tacatggcca ctcagatttc ttctgcaatg gagtacttag agaagaagaa tttcatccat
1261 agagatcttg cagctcgtaa ctgcctagtg ggagaaaacc atgtggtaaa agtggctgac
1321 tttggcttaa gtagattgat gactggagac acttatactg ctcatgctgg agccaaattt
1381 cctattaagt ggacagcacc agagagtctt gcctacaata ccttctcaat taaatctgac
1441 gtctgggctt ttggggtatt gttgtgggaa attgctacct atggaatgtc accatatcca
1501 ggtattgacc tgtctcaggt ctatgaccta ctagaaaaag gatatcgaat ggaacagcct
1561 gagggatgcc cccctaaggt ttatgaactt atgagagcat gctggaagtg gagccctgcc
1621 gataggccct cttttgctga aacacaccaa gcttttgaaa ccatgttcca tgactccagc
1681 atttctgaag aggtagctga ggagcttggg agagccgcct cctcgtcatc tgttgttcca
1741 tacctgcccc ggctacctat acttccttcc aagactcgga cactgaagaa acaggtggag
1801 aacaaggaga acattgaagg ggcacaagat gccacagaaa attctgcttc cagtttagca
1861 ccagggttca tcagaggtgc acaggcctct agtggatccc cagcactgcc tcgaaagcaa
1921 agagacaagt cacccagcag cctcttggaa gatgccaaag agacatgctt caccagggat
1981 aggaaggggg gcttcttcag ctccttcatg aagaagagaa atgctcctac accccccaaa
2041 cgcagcagct ccttccgaga aatggagaat cagccccata agaaatacga actcacgggg
2101 cttccagagc aggataggat ggcaatgacc cttcccagga actgccagag gtccaaactc
2161 cagctggaaa ggacagtgtc cacctcttct cagccagaag agaatgtgga cagggccaat
2221 gacatgcttc caaaaaaatc agaggaaagt gctgctccaa gcagggagag accaaaagcc
2281 aagttattgc ccagaggagc cacagctctt cctctcagaa caccctctgg ggatctagcc
2341 attacagaga aggaccctcc aggggtggga gtggctggag tggcagctgc ccccaagggt
2401 aaagagaaga atggtggggc acgacttggg atggccggag ttccagagga tggagagcag
2461 ccgggctggc cttctccagc caaggctgcc cccgtcctcc caaccactca caaccacaaa
2521 gtgccagtcc ttatctcacc cactctgaaa cacactccag ctgacgtgca gctcattggc
2581 acagactctc aggggaataa attcaagctc ttatctgagc atcaggtcac atcctctgga
2641 gacaaggacc gaccccgacg ggtaaaacca aggtgtgccc cacccccacc accagtgatg
2701 agactactgc agcatccgtc catctgctca gaccctacag aagagccaac tgccctaact
2761 gcaggacagt ccacatcaga aacacaggaa ggaggaaaga aggcagctct gggcgcagtg
2821 cccatcagtg ggaaagctgg gaggccagtg atgcctccac ctcaagtgcc tctgcccaca
2881 tcttccatct cgccagccaa aatggccaat ggcacagcag gtactaaagt ggctctgaga
2941 aaaaccaaac aggccgctga gaaaatctca gcagacaaaa tcagcaaaga ggccctgctg
3001 gaatgtgctg acctactgtc cagtgcactc acggaacctg tgcccaacag ccagctggta
3061 gacactggac accagctgct tgactactgc tcaggctatg tggactgcat ccctcaaact
3121 cgcaacaaat ttgccttccg agaggctgtg agcaaactgg aactcagcct gcaggagcta
3181 caggtttctt cagcagctgc tggtgtgccc gggacaaacc ctgtccttaa taacttattg
3241 tcatgtgtac aggaaatcag tgatgtggtg cagaggtagc cactgttagc ctggtgggaa
3301 aatgcacaca tttctgaggg gagagggaaa aggacttgtt ttcctgtgtt cttgttttca
3361 gaaaatgaaa gactcatact tgagtgtgtt tatgtgaagt acctcagatc cctgagttct
3421 cacgtttaca gtttcatctc aaaaataaga agcaaaccac ataagtatag gagaggtaaa
3481 ttaagtgggg gcaaggcagt agtggacagg gttggaaact gcactggaaa atagggaaca
3541 tgtgtatgtc ataaggaagg caatgcagcc catccctacc tggaatgctg ggaagtgcta
3601 ggcagggctg ctctcagcaa gactgcagca gctgcaccca gacctggggc tctggtaggt
3661 actaatggtg attatgctcc aatttaccta atgaatttgg tgggacagca gaaaagaaag
3721 ctgggaatgt accaagagaa atttttgttc agggctgttg gaagtagctg ttagccttgc
3781 ttccacaagg ccattgctgc tgtaataaga actgcaaatc agagtgctac aacataaaac
3841 tgggaaatat ggccctatct gaatgcctct gtcctatttt ccgctggtgt atcagttagt
3901 gcaggaagta aagaatgctg gaaagttgaa tcagaaattg aaaaccttct aaaatcttac
3961 acagattagc agaagtcact tctcccagtc tggtatatta tttcataatg gaccaggatc
4021 ggcttcctgc ctgttggtgg ctatctgtaa accataagta caggggtctc cctagtggtt
4081 cttctctgtc ttttgctggg caggctgtct tcctttattc ctggtagcat tcagagcatt
4141 aaccagtgtt gattttgaaa atagtagtcc ctacaggttc tcacaaagga atgaatcctg
4201 ttctgataca gttcccctgc atactgacat actggccaag gacttgagca gctgtgtatt
4261 tttctttatc aactaaaata ccagggagat ggtcttttct tgaaacccag tggcctgtat
4321 gtgactgaga ggaaaagctg gcttggtcct aatggctgtt tctctgtacc tttcccctcc
4381 cttaccacct taagcccaat ccaggtagag aatagggaga ggcattctcc tctctatgga
4441 tttgaagtga atcaccccca cattattctc acatgctttt cttctctcac atattcctcc
4501 ctactccccc acccaatcat tgtgcttatt tgtacagatc ttattgggaa tattctttat
4561 ttattttgtc atttcacttc tattttaaga atgcataatt gaaggagtag tcattttcag
4621 ggagcaccag gtagaccctg ggaacctaat gacttaatcc ttaaatatgt tttgcccttg
4681 aaaaataggc cttttccttc cttccttagt tataattgtg gaagctaatt aggatggcat
4741 ggaagtgaat ctaatgagtt aggtattatt aatgttcttg gtatcgggtc taattccagt
4801 tactgcttca ttctcttttt aaagctttat gaatacttcc cccatcctcc ccaaggagag
4861 ctcaatacac acatattttt attttattct ctcaaaggaa tattagctta ggaagatagg
4921 aattcaacat tgagcactga gttttcttct ggctctgtca ttgatacact gtcaaaccac
4981 agcctcatct cttaatctat ttaattaagg taacagtaca tgttctcaag ggtgttgcaa
5041 gtaagtgtgc agctatccct tggagagcct ctctggaaag ctcttttagt gcagtgttgt
5101 tatgctgaat tgttttccat tatcttattt gctgagtaga aaatattaat gaaattaaga
5161 attgttgaga ttatatgaat tgggctagaa tactaagggg aaaactatgt tttgaataga
5221 gtttggcatt tttgaccaag aacaaaattg agttttcatt ggcaagaaag gaaaccttga
5281 ttcttaccat tgctgctcca aaggaggccc aggttaagag gattagagga gacacgcggt
5341 gctgggcatt cctggcaggt gttgggtgat ccccgcagta tgtcacctgc agttgcagca
5401 caggcagcta gtgattgggt tcatctcctc ctagtggttg gaagagaact cagatgtaaa
5461 aaccagcggt ccttctccca ccttctttcc tgccattctt gctcatcata catgtccgta
5521 aacttgaaga actcgtttta gcagctagcc ttttaaggtc gaggatggga aagctaaaac
5581 tgtagaatat tattatgctg ctttttgggt ttatccctgt tgttgtggga tgcaagttaa
5641 gggattgtaa ttgtttttca gggttttttt gttttttgtt ttttaagcaa gggctctatt
5701 ttcccttgag agttctggaa ctaagccttg gagaaacact actgagtgta tttaggctcc
5761 ctggttttct tgcccaacaa caatctgaag ggtagggggt gggggctgtg tcttactcag
5821 gggcagcacc tagctgtctt gtctacagtg ggtgcacgat atataaatgg aattgatttt
5881 tgtcaacact gtcaagagtg gcattgacta ttggagcata ccccgtccac atgatgcttg
5941 aactatgtaa cttcaggggt tgagggctca aggttcaggt taaagaggca ctgtcaactt
6001 actatacaag cataatttag gtttttcctt tttctacttg aaaaggacca gcttaaacac
6061 aaacccttat gtaaattaaa aggtttgaat ccaaagcaga gagaactgct tctggaaaag
6121 tgtagtttaa ttttaactat tctaaaagca atgagcaaag gcccttgtcc aaggcgttga
6181 cagttttcta aagtggttat gctgtatatc tggatgcatg cctttgggct gccactgctt
6241 gattcctttc atgtacagat aatattactt cagtttagat ttcccacttt aaaatgcagt
6301 gatttgtgtt gaatacatct tgattgtgct ttacctaaag tattttctta aaaggctttg
6361 tgtaaaattt aaatgtatat attttcctgt agacttccat catgattttc agagattagc
6421 ctaaaaaaat ttggccctaa gaaattcatt cagtgttttt ctagatgacc tctgtacata
6481 gaggtcatta tagtggagac cctttaccag cagcatttta agatttaaat tagatagaaa
6541 gtttcttagg attcaactga aaattggcta gtaaaatatg tcccaggtaa taaagcatgc
6601 tgactttgct aaggcactgc ccatttttat ttaactaaag tcatggagat tttgagttta
6661 aaggatgcag tatagatagt ggtttagtgt ttaggctcta atgccagtct aaaaggcaag
6721 tcatttaacc ttgggagcct cagtttcctc actgtaaaac agggataata atagtaacta
6781 cctcagggtt gttgtaagga ttaaatgaga tgatatttgt aagatactta gctcaagtgc
6841 ctggcacaca atgagcacac tctataaatg ttctactact actattatta acacctagtc
6901 tagggatgca cagcagaatc ccctagggtt aaaaaaaaaa aaaaaaaaa
//