LOCUS BX538213 6930 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686F1544 (from clone DKFZp686F1544);
complete cds.
ACCESSION BX538213
VERSION BX538213.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6930)
AUTHORS Lauber J., Bahr A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686F1544) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..6930
/db_xref="H-InvDB:HIT000054995"
/organism="Homo sapiens"
/map="5q35.2"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686F1544"
/tissue_type="human amygdala"
/db_xref="taxon:9606"
CDS 549..2738
/codon_start=1
/gene="DKFZp686F1544"
/product="hypothetical protein"
/note="hypothetical protein, differentially spliced"
/db_xref="GOA:Q17RY0"
/db_xref="H-InvDB:HIT000054995.14"
/db_xref="HGNC:HGNC:21747"
/db_xref="InterPro:IPR000504"
/db_xref="InterPro:IPR012677"
/db_xref="InterPro:IPR032296"
/db_xref="InterPro:IPR034819"
/db_xref="InterPro:IPR035979"
/db_xref="InterPro:IPR038446"
/db_xref="PDB:2MKI"
/db_xref="PDB:2MKJ"
/db_xref="PDB:5DIF"
/db_xref="UniProtKB/Swiss-Prot:Q17RY0"
/protein_id="CAD98072.1"
/translation="MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAF
INNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKAKSQQQEQQDPLEKQQLSPSPGQ
EAGILPETEKAKSEENQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTS
SASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGF
GGSFSPQIGLLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLAN
NLNKPPSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPL
KKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSLID
IMRAENDTIKGRLNYSYPGSDSSLLINARTYGRRRGQSSLFPMEDGFLDDGRGDQPLH
SGLGSPHCFSHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAES
KSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDS
DFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGA
GRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPF
FCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN"
regulatory 6893..6898
/regulatory_class="polyA_signal_sequence"
polyA_site 6909
BASE COUNT 2081 a 1261 c 1293 g 2295 t
ORIGIN
1 aatgttctta aattattcct gatttttttt taaccaagct gccaagaaaa gaacgtattc
61 ccctcttagt cctattctaa tttttatgtg agtgaatcta aactgctgag gaaaaccata
121 tgtgattgtt aaattatata tatctatatt tttactccgc gcaaggctta ttcttctaca
181 tccatagatg cttgagaagc tctgtttttg tcattcatgt acattttcct ttggaaaaag
241 aaagcgccta ttttactaac caaagacttg atttttaccc tcttcatttt tattccctcc
301 taaaaataag cccaattgga tccaagtcaa tgttttaaga gattttttta agagttgttt
361 tttctttcag agaccagaat tccaaatcag aacaatttaa ggtgataagc tgcgatcttt
421 gagctagcta taaataagac atttcaagca agcaagcaaa caacttaaat ttggggtaga
481 ggaaaaaaaa ggcgtgagac atcaggttgt cattttttat tgtgagattc tgctcctaaa
541 aataataaat gggggattac gggtttggag tgctagtgca aagcaatact gggaataaat
601 ctgcttttcc agtcagattc catccacatc tgcagcctcc acaccatcac caaaatgcca
661 cccccagccc tgctgctttt ataaataata acacagctgc caatggcagc agtgctgggt
721 cagcttggct ttttcctgct ccagctaccc ataacattca ggatgagatc ttggggtcag
781 aaaaagcaaa aagtcagcaa caggaacagc aagacccctt agaaaagcag cagctttccc
841 caagtccagg tcaggaagct ggaatactgc ctgaaacaga gaaggcaaaa tcagaagaaa
901 atcaagggga caattcttcg gaaaatggca atgggaagga gaaaataagg atcgaatctc
961 cagtgttgac agggtttgat tatcaagaag ccactgggct aggtacttca acccaaccct
1021 tgacatctag cgcatcgtct cttactggtt tcagtaactg gtcagcagcg atagcgcctt
1081 cctcctctac aataatcaat gaagatgcaa gtttctttca ccagggaggg gtccctgctg
1141 cttcggctaa taacggtgct ctgttgtttc aaaatttccc ccatcatgtc agccctggct
1201 ttggaggcag cttctctcct cagatcgggc ttctctcaca gcaccaccca catcaccctc
1261 atttccagca tcatcacagc cagcatcagc agcaaaggag gtctcctgcc agtccccatc
1321 ccccaccctt cacacataga aatgctgctt ttaaccagct gcctcatttg gcgaataatc
1381 ttaacaaacc cccctctccg tggagcagct accagagtcc gtcaccaaca ccctcctctt
1441 cctggagccc gggcggtggt ggatatggtg gctggggagg ttcccaaggc cgagatcacc
1501 gcagagggct gaatggtgga ataacgcccc tgaactccat ctcgcctttg aagaaaaatt
1561 ttgcaagcaa tcatattcag ctccagaagt atgctcgccc cagctctgcc tttgcaccta
1621 aatcctggat ggaagatagc ttgaacaggg ctgacaacat ttttcctttt ccggatcgcc
1681 ccaggacatt cgacatgcac tcactggaga gttcactcat tgacataatg agagctgaaa
1741 atgataccat taaaggtcgt ctaaactatt catatccagg atccgatagc tctctgctta
1801 ttaatgcaag gacatatggg cgaaggagag gtcagtcttc actgtttcca atggaagatg
1861 gattcttgga tgatggccgt ggggatcagc ctcttcatag tggcctgggt tcacctcact
1921 gcttcagtca ccagaatggg gaaagagtgg aacgatattc tcgaaaggtg tttgtaggcg
1981 gattgcctcc agacattgat gaagatgaga tcacagctag ttttcgtcgc tttggccctc
2041 tgattgtgga ttggcctcat aaagctgaga gcaaatccta ttttcctcct aaaggctatg
2101 cattcctgct gtttcaagat gaaagctctg tgcaggctct cattgatgca tgcattgaag
2161 aagatggaaa actctacctt tgtgtatcaa gtcccactat caaggataag ccagtccaga
2221 ttcggccttg gaatctcagt gacagcgact ttgtgatgga tggttcacag ccacttgacc
2281 cacgaaaaac tatatttgtt ggtggtgttc ctcgaccatt acgagctgtg gagcttgcga
2341 tgataatgga tcggctatat ggaggtgtgt gctacgctgg gattgatacc gaccctgagc
2401 taaaataccc aaaaggagct gggagagttg cgttctctaa tcaacagagt tacatagctg
2461 ctatcagtgc ccgctttgtt cagctgcagc atggagagat agataaacgg gtggaagtta
2521 agccatatgt cttggatgat cagctgtgtg atgaatgtca gggggcccgt tgtgggggga
2581 aatttgctcc atttttctgt gctaatgtta cctgtctgca gtattactgt gaatattgct
2641 gggctgctat ccattctcgt gctggcaggg aattccacaa gcccctggtg aaggaaggcg
2701 gtgaccgccc tcggcatatt tcattccgct ggaactaaag gataactgca gtgctcattt
2761 tcaggcctca gaataagtgc actcttctgt tcattctgac cccttcctca acctcttcac
2821 gctggcatgt ccttttgtag cagtctgtaa cttaactata gtataatgaa aagaatgacc
2881 tataatatag gtgttttgta gattcttgtg tcactgcaaa caatatgaac tcctttttcg
2941 tattgccatc gggttgcatg gaagttttat tctcttgttt tgctggaaac caagaggatc
3001 caaacttcct gcaacatttt cttagaggag agagagaaat attaaaagag aaatgaaaca
3061 atagagtatt ttgggttttt aattaaatta ttgttaataa tataacatat aagaatactt
3121 ttattaaaat aaccatgcaa caataacact atcggtctat ctgacagttt ttcccccagg
3181 gaagtgcttt tgccttttcc tttctatttt tttttttttt tcatcttttt tgtctctctc
3241 ttttttccat ccctttttaa tttttttaac agcaatggag gaagttaaca atttttaatg
3301 gaaagagcat gttagagcaa acaaatgcat aagcaagact gagcagcatt ataattaatt
3361 ttcagggttt tgaggctgaa cataatttca ttatccctca aaaagttacc accacatcag
3421 aaaaaataaa aaaaaaatag taaagtaggc agagctaggt ttattttctc ttaaacaatt
3481 tttaaaattc agaatgtaaa aattgggtaa atttactact gaggggagtg cacttattta
3541 tttaacttac ttatctggtc aaagccccag gaaacctacc aaagctagaa ttaatgacaa
3601 ctggtgggaa acctagcatt tcctctcctg aagaataaat gtataaatgt tatttttgat
3661 gtttatatat aaactctata tcctaattta ctaatactca tcagatgtca gcctttgctc
3721 tccattttga cgttaaaaaa caacaacaga tctagagata cctcaaggat atcatttttg
3781 attttgtgtt acagtacact tgtagccaaa actggaagac aaaaccaata tataatttgg
3841 ctgctgattg gcttactttt agatttaaag ttactttggg tatcctgtaa tttagttgta
3901 acatagaaaa tgaaaaaaca gttaaaaaaa gtgaagtagt tgcaaagtgt tttgcactgt
3961 tgaactaagt aactgtgtaa atctgtgcaa aggtacgtat gtttatctta ctcttcctat
4021 aaactaaaat aacattacag tttccgaatt tagcatggga catagtcagt gtttgaagtg
4081 ccaacttcat caagtaatgc atgctttatt ataaataaaa ttctagcttt gaaaggcgtt
4141 atgtgttgaa cagtatgctt caggggtaaa tttaaaatag tctcttgaag ccctagtcat
4201 ggaagtaact tttattttaa ttgacattct cttattaaat gccctatcca tcattaaaag
4261 gtttattatc agtgggcaaa acatgaaata atatgatcga atggcaatct tgctagttgc
4321 gctacctaac agtaccatct tggatccttc aaaaccaaag acttgcccca gcactgctgt
4381 ggaaccacct ggcttatgac ccctatggat gatctttagg aaaagcagcc ctttactttt
4441 aatacaggct ttaatgaact atacctgtta agttccaaag gtcaaaatgg aggcatttgc
4501 tgtctaatat tcaaacatag aaagggagct gcttttaaag aattccctgc aaatactgaa
4561 agcagtcatg cgaatggagg gtgctcttgt gtagctggtc agggactttt ttttcttttc
4621 tcctgaacta catgattcta attggaatgt tcatttgcct ctttttactc ttttaaatgc
4681 ttgtaggtgg cttggggtgt gctatcgtgc tgttcctact cagtaaacag gtgtgatgag
4741 ttaacaagaa ataacactgt ttgagaacta gctttgaata ataatttttc cctttgtaca
4801 tgacctgctg aatttcggta cagtgttttt gtagctaact tattttgtca tgcacataat
4861 gtatatttgt tatgcactac ttttgtatat cttgtttttc caacagtgaa catttttagg
4921 cacacttttc actgacggga tatctcttta tgcaatacct caatttttca tattgcaaag
4981 agtagctttt tgtactttta ttactgagag atcttcatat acttcatttt ttaatataaa
5041 taattttaat aaattttatt ttcttatatt ctgcttttta tacatttcag tgctctgcat
5101 acattttaaa ttatgaatgt cgtgcactgg caatgctatt ttagagtctg cagagaagag
5161 aaagcatgtt gcttaaacat ccttccccag caccagctat tggtgtacct ataatttaag
5221 aaatagtcta tgtaaagtca caaattaatg aaaaaaattc gcatgaaaat gacagataac
5281 actgtagttc ctaaaaaaaa aattaaatgc ataagcataa ggtagaaatt aaaataacaa
5341 aattgtccac agcttcttac taagttttta aaattattca taaaatgcag acatttttgg
5401 tgaatgttta gccattttta atattaataa attgatgtta agtgtttgat tcagagatgt
5461 ctgctctttt aaattatata taaggaaaaa aaatagcctg ccttgggaca ggtgtgtaat
5521 gttagtgtgc atgactaatg taagaaattg ttattctact aatatttact tgtgattgtg
5581 tgacaagtgt gtttacagat tattggttac acttcaattt acagggcata aacaatgatt
5641 atctattact ctgaacttta tgattacatg ttcttcagat tacatgggat tgtagttggg
5701 agttaccatg taactcaaac ataattaaca tgtaattagt ttacagattg tagggcatca
5761 cttcaattca ccaagcatgt agttctagcg cactagcatg gcgccagcca tgtacttaca
5821 atgtagttac agagtaatta catggtgatt tttgcaatgt aaaataaagt gtttctgatt
5881 attttctatg taaaggaacc ctctcctttc cccttctggt ccctgcgctt tggtataata
5941 tatatacttc tccatacaca gacctctgca gaatgcaaaa taaaacttgc agtgaatgaa
6001 tttagcattt tatgagagtg ctgttggaaa gacttgataa ttcacccctt ttgttttgaa
6061 gagttgaatc ttctgttaaa aggtgattta aaacttgaat gtgatgaatt gtggcaagtt
6121 aacttcaagt tatgtgcaat acttatttca aacttttgaa agatctttgc agtgtaattc
6181 tttgttttta attgcagaca tttaaaaatg tcattttcta ctgttaagag taatcctctt
6241 tcttgctggt gtttctaaag aaaagaatca gaaatcaatc tttctactaa tgtaaatttg
6301 agattatttt taaaaatgga ataaaagagg ttttggtcat ttgctttatt ttattatttt
6361 aaagctactg tgattgatag cattgtaaga atcgggacaa tattgtattc aactgtttta
6421 ttttttatat ttttaaaatt taaagtataa ttagttttta taattttcat cagatttttg
6481 ttatattttt tggaagtgaa acttttagca agtgggtgtc tagtttttac taatccctaa
6541 ttttttttcc agtgtattgc tcatattatc agaaggaaaa gttatttaag tatgtcagtt
6601 aattgtacta cttggctgaa tttccatata gtttttactg tgtatgggga ggttgtagta
6661 tttattatag cattttaaat aagggtaatt cattttttat taaagtcatt ttcacgttaa
6721 gttcctattt ttgtatgttc tactcttaag ttatataaca cagttccttt tttaaaagag
6781 ttcatttgtt gaagtgctag tgaaaaatta atgttattaa atagtttgca aatgactatt
6841 tataccagta tgcatataat ttttaaatat ttgtaatgtg agatgttgaa tgaataaaac
6901 ttttaactca aaaaaaaaaa aaaaaaaaaa
//