LOCUS BX538196 3209 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686M05208 (from clone DKFZp686M05208).
ACCESSION BX538196
VERSION BX538196.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3209)
AUTHORS Lauber J., Bahr A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686M05208) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3209
/db_xref="H-InvDB:HIT000054978"
/organism="Homo sapiens"
/map="5q33.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686M05208"
/tissue_type="human rectum tumor"
/db_xref="taxon:9606"
CDS <1..330
/codon_start=1
/gene="DKFZp686M05208"
/product="hypothetical protein"
/note="protein-tyrosine kinase T-cell-specific
itk/tsk/emt, N-terminus truncated, differentially spliced"
/db_xref="GOA:Q7Z318"
/db_xref="H-InvDB:HIT000054978.13"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR001245"
/db_xref="InterPro:IPR011009"
/db_xref="InterPro:IPR020635"
/db_xref="UniProtKB/TrEMBL:Q7Z318"
/protein_id="CAD98063.1"
/translation="GQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH
PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL
EEACVIH"
regulatory 3173..3178
/regulatory_class="polyA_signal_sequence"
polyA_site 3192
BASE COUNT 869 a 684 c 736 g 920 t
ORIGIN
1 gggcaatttg ggttggtgca tctgggctac tggctcaaca aggacaaggt ggctatcaaa
61 accattcggg aaggggctat gtcagaagag gacttcatag aggaggctga agtaatgatg
121 aaactctctc atcccaaact ggtgcagctg tatggggtgt gcctggagca ggcccccatc
181 tgcctggtgt ttgagttcat ggagcacggc tgcctgtcag attatctacg cacccagcgg
241 ggactttttg ctgcagagac cctgctgggc atgtgtctgg atgtgtgtga gggcatggcc
301 tacctggaag aggcatgtgt catccactga gacttggttc gttctggatg atcagtacac
361 cagttccaca ggcaccaaat tcccggtgaa gtgggcatcc ccagaggttt tctctttcag
421 tcgctatagc agcaagtccg atgtgtggtc atttggtgtg ctgatgtggg aagttttcag
481 tgaaggcaaa atcccgtatg aaaaccgaag caactcagag gtggtggaag acatcagtac
541 cggatttcgg ttgtacaagc cccggctggc ctccacacac gtctaccaga ttatgaatca
601 ctgctggaaa gagagaccag aagatcggcc agccttctcc agactgctgc gtcaactggc
661 tgaaattgca gaatcaggac tttagtagag actgagtacc aggccacggg ctgcagatcc
721 tgaatggagg aaggatatgt cctcattcca tagagcatta gaagctgcca ccagcccagg
781 accctccaga ggcagcctgg cctgtggcat cagtccctga gtcaccatgg aagcagcatc
841 ctgaccacag ctggcagtca agccacagct ggagggtcag ccaccaagct gggagctgag
901 ccagaacagg agtgatgtct ctgcccttcc tctagcctct tgtcacatgt ggtgcacaaa
961 cctcaacctg acagctttca gacagcattc ttgcacttct tagcaacaga gagagacatg
1021 agtaagaccc agattgctat ttttattgtt atttttaaca tgaatctaaa gtttatggtt
1081 ccagggactt tttatttgac ccaacaacac agtatcccag gatatggagg caaggggaac
1141 aaagagcatg agtctttttc caagaaaact ggtgagttaa gtaagattag agtgagtgtg
1201 ctctgttgct gtgatgctgt cagccacagc ttcctgccgt agagaatgat agagcagctg
1261 ctcacacagg aggccggata ttctgagaag cagctttatg aggttttaca gagtatgctg
1321 ctacctctct ccttgaaggg agcatggcga gacccattgg atggattggg gtgaacagtt
1381 caggtcccat gcttggagca ttgggtatct gatgtctgca ccagaacaag agaacctctg
1441 acggtggaga accatgtggt gcaagaagag atcttaggtc tcttctttta taccaagctc
1501 atcttttata ccaagctgtg caggtgacta tgcctcctct tctgcacaga atgcttccac
1561 cagcatcctg agaagaaatg attacttctg aaaaacatcc ttttttccgg cctctgggaa
1621 tcagcccccc ctctctgcac tatccgatcc tcatcaacag agggcagcat tgtgttggtc
1681 aatgttccct tggcgagcaa ttgaaacttg tttaggccct agggttgagc aattttaagg
1741 ttgagactcc aagtctccta aaattctagg agagaaataa agagtctgtt tttgctcaaa
1801 ccatcaggat ggaaacagtc gggcactgac tggggtgctt ccaagaggca tgagagtgcc
1861 tactctggct tgagcacttc tatatgcaag gtgaatatgt actgagctag gagacttccc
1921 tgcaaaatct ctgttcaccc tgggttcaca tccccatgag gtaatattat tattcccatt
1981 ttacaaataa tgtaactgag gctttaaaaa gccaagacat ctgcccaaag tgatggaact
2041 agaaagtcta gagctggtat tctagcccaa atctgtctga ccgcaataca cagattcttt
2101 attcctattc gacactggct tctactgaaa atgaaacgga ttgcagaggg aataaataca
2161 aagatggaaa gccagtaaag aagtcagtat agaaccacta gcgaatagtg ttgctctggc
2221 acagaccact gtggttgatg gcatggccct ccaacttgga ataggatttt ccttttccta
2281 ttctgtatcc ttaccttggt catgttaatg actttggagt tattcagtta atgacccttt
2341 aattctcaca accaaccagt catgttgctt gaagccattt atagacgagc ttcaaagcaa
2401 ctttaaaaga ttcttctgta gaagtatgag ttcttccttt aattatcatt ccaactttca
2461 gctgtagtct tcttgaacac ttcatgagga gggacattcc ctgatataag agaggatggt
2521 gttgcaattg gctctttcta aatcatgtga cgttttgact ggcttgagat tcagatgcat
2581 aatttttaat tataattatt gtgaagtgga gagcctcaag ataaaactct gtcattcaga
2641 agatgatttt actcagctta tccaaaatta tctctgttta ctttttagaa ttttgtacat
2701 tatcttttgg gatccttaat tagagatgat ttctggaaca ttcagtctag aaagaaaaca
2761 ttggaattga ctgatctctg tggtttggtt tagaaaattc ccctgtgcat ggtattacct
2821 ttttcaagct cagattcatc taatcctcaa ctgtacatgt gtacattctt cacctcctgg
2881 tgccctatcc cgcaaaatgg gcttcctgcc tggtttttct cttctcacat tttttaaatg
2941 gtcccctgtg tttgtagaga actcccttat acagagtttt ggttctagtt ttatttcgta
3001 gattttgcat tttgtacctt ttgagactat gtatttatat ttggatcaga tgcatattta
3061 ttaatgtaca gtcactgcta gtgttcaaaa taaaaatgtt acaaatacct gttatccttt
3121 gtagagcaca cagagttaaa agttgaatat agcaatatta aagctgcatt ttaataaata
3181 tggtgcatag ggaaaaaaaa aaaaaaaaa
//