LOCUS BX538112 2893 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686K21156 (from clone DKFZp686K21156);
complete cds.
ACCESSION BX538112
VERSION BX538112.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2893)
AUTHORS Bloecker H., Boecher M., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology
Ltd., Braunschweig/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686K21156) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2893
/db_xref="H-InvDB:HIT000054895"
/organism="Homo sapiens"
/map="Xq21.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686K21156"
/tissue_type="human colon endothel primary cell culture"
/db_xref="taxon:9606"
CDS 111..2183
/codon_start=1
/gene="DKFZp686K21156"
/product="hypothetical protein"
/note="hypothetical protein, differentially spliced"
/db_xref="GOA:Q7Z353"
/db_xref="H-InvDB:HIT000054895.14"
/db_xref="HGNC:HGNC:26411"
/db_xref="InterPro:IPR001356"
/db_xref="InterPro:IPR009057"
/db_xref="PDB:2DA4"
/db_xref="UniProtKB/Swiss-Prot:Q7Z353"
/protein_id="CAD98024.1"
/translation="MNLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLD
FSVVRTWVGNKRRKMSSKNSESGTATTGTSLSAPDITVRNVVNIARPSSQQSSWTSAN
NDVIVTGIYSPASSSSRQGTNKHTDTQITEAHKIPIQKTATKNDTEFQLHIPVQRQVA
HCKNASLLLGEKTIILSRQTSVLNAGNSVFNHAKKNYGNSSVQASEMTVPQKPSVCHR
PCKIEPVGIQRSYKPEHTGPALHNLCGQKPTIRDPYCRTQNLEIREVFSLAVSDYPQR
ILGGNAPQKPSSAEGNCLSIAMETGDAEDEYAREEELASMRAQIPSYSRFYESGSSLR
AENQSTTLPGPGRNMPNSQMVNIRDMSDNVLYQNRNYHLTPRTSLHTASSTMYSNTNP
LRSNFSPHFASSNQLRLSQNQNNYQISGNLTVPWITGCSRKRALQDRTQFSDRDLATL
KKYWDNGMTSLGSVCREKIEAVATELNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGP
ADFSEQPESGSLSALTPGEEAGPEVGEDNDRNDEVSICLSEGSSQEEPNEVVPNDARA
HKEEDHHAVTTDNVKIEIIDDEESDMISNSEVEQVNSFLDYKNEEVKFIENELEIQKQ
KYFKLQTFVRSLILAMKADDKEQQQALLSDLPPELEEMDFNHASLEPDDTSFSVSSLS
EKNVSESL"
regulatory 2847..2852
/regulatory_class="polyA_signal_sequence"
polyA_site 2867
BASE COUNT 993 a 543 c 584 g 773 t
ORIGIN
1 ggtctgaagc ggcactggag acccaggaaa aatctcgctg aatccgcctg ccccagcagc
61 ggcctgatct gggttccgct gattcctttc gtaaccgcac cacacccgag atgaatctac
121 gttctgtatt tactgtagaa caacaaagga ttttacagcg ttattatgaa aatggaatga
181 caaatcaaag taaaaattgc tttcagctca tattacagtg tgcacaggag actaagctgg
241 acttcagtgt agtcaggacg tgggttggca ataagagaag aaagatgagt agtaagaact
301 ctgaatctgg aacagcaaca acaggaacct ctttgtcagc tccagacatc acagtcagaa
361 atgtggttaa tattgctcga ccctcaagcc agcagtcttc ttggacatct gccaataatg
421 atgtcattgt aactggtata tacagtccag ccagttcatc aagtaggcaa ggaacaaaca
481 aacatacaga cacacaaatt acagaagcac ataaaatccc tattcagaaa acagccacta
541 aaaatgatac tgagtttcag ttacacattc ctgtccaaag acaagtagca cactgtaaaa
601 atgcttccct actcctaggt gaaaaaacaa ttattttgtc aagacagaca agtgtgctaa
661 atgctggaaa ctcagtattc aatcacgcaa agaaaaacta tggaaactct tcagtacaag
721 cttctgaaat gacagtacct caaaagcctt ctgtgtgcca ccgaccttgt aaaattgaac
781 cagttgggat tcaaaggtca tataagcctg aacacacagg cccagcatta cataacttat
841 gtgggcaaaa gccaactatt agagaccctt actgtagaac acaaaacttg gaaatccgtg
901 aagtgttttc attggcagtt agcgattacc cccagagaat tctgggagga aatgccccac
961 agaagcctag ctcagcagaa ggaaattgtt tgtccattgc aatggagact ggagatgctg
1021 aggatgaata tgccagagag gaagagctgg catcgatgag agcacagata ccaagctatt
1081 cgagatttta tgaaagtggc agttcccttc gagctgagaa ccaaagtaca accttgcccg
1141 gaccaggaag aaatatgcca aattcacaaa tggtgaatat tagagatatg tcagacaatg
1201 tactgtatca aaacagaaac taccatttga caccacggac ctcattacat acagcatcta
1261 gtacaatgta cagtaatacc aatccattac ggagtaattt ttctcctcat tttgcatcat
1321 caaaccaatt gagattatca caaaaccaaa acaattacca gatttcagga aaccttactg
1381 tgccttggat tacagggtgt tctagaaaaa gagcactaca ggaccgcact cagttcagtg
1441 accgagactt agccaccctt aagaagtatt gggacaatgg catgaccagc ctgggctctg
1501 tttgtagaga gaaaattgaa gctgtggcaa ctgaattaaa tgttgactgt gaaatagttc
1561 ggacttggat tgggaatcga agaaggaaat atcgtttaat ggggattgaa gttccacctc
1621 caagaggagg ccctgctgat ttctctgagc agcctgagtc tggttcttta tctgcactca
1681 caccaggaga ggaagctggg cctgaagtag gagaggataa tgacagaaat gatgaagtat
1741 ccatctgttt gtctgaagga agctctcaag aagagcccaa tgaagttgtt ccgaatgatg
1801 caagggctca taaggaagag gaccaccatg cagtaaccac agataatgtg aaaatagaaa
1861 ttattgatga tgaagaaagt gacatgataa gtaattctga agtagaacaa gtaaactctt
1921 tcttggatta taagaatgaa gaagtcaaat tcattgaaaa tgagctcgag attcaaaagc
1981 aaaaatactt taaacttcag acttttgtta gaagcttgat attagcaatg aaagctgatg
2041 ataaggaaca acagcaggca ctgctgtcag atttacctcc tgaattagag gaaatggatt
2101 tcaatcatgc ctcactggag cctgatgata cctcattcag tgtatcttct ttgtcagaga
2161 aaaatgtctc agaaagtttg tgatttcagt tggagggaat atatgataca gtcttttggc
2221 ttcgtaacag gtgtgcattt caagataact gcattctgtt gccctggtat tctttagttg
2281 ggaaaacaca ttgttgaaac ggacgtattc tgtgaagaat gtacaagata taatggctac
2341 agtgcaacaa aaatgtaggt gaaatttaaa agcattgttt gagagagtat ttttttaact
2401 gatggaactc tggaaaaaaa ttatatttaa gtttcagcag tttaaccctg aaattcatta
2461 tgtctaattt ctaaccagag acaaaataac taaagacatt tcagcattgc ttatcaagtt
2521 gctacagctt gattagtctt gtttttgtag ccattacatc ttctttcttc ttctctcctt
2581 ttcctatcat ccacttacac tttttctcag gaaagtggac tgaacattta aaacaaaact
2641 ttaaaaaatt atttaactca ttatttaatg agttctctga tttagttttt aacccctatg
2701 aaaatttgac ttaaactaat gactgaaaat taaatgatta caggtatgta attgtaaatt
2761 gctggtgttc ttctattatc taacccaaat atttgtgtgg gggtggggaa gcacaatgga
2821 aaggtaattt aaccaacata acgtcaaata aattacgaag tgtacagaaa cgaaaaaaaa
2881 aaaaaaaaaa aca
//