LOCUS BX538106 4458 bp mRNA linear HUM 17-JUN-2003
DEFINITION Homo sapiens mRNA; cDNA DKFZp686J02145 (from clone DKFZp686J02145).
ACCESSION BX538106
VERSION BX538106.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4458)
AUTHORS Bloecker H., Boecher M., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology
Ltd., Braunschweig/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686J02145) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4458
/db_xref="H-InvDB:HIT000054889"
/organism="Homo sapiens"
/map="14q32.33"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686J02145"
/tissue_type="human colon endothel primary cell culture"
/db_xref="taxon:9606"
CDS <1..3630
/codon_start=1
/gene="DKFZp686J02145"
/product="hypothetical protein"
/note="hypothetical protein, N-terminus truncated"
/db_xref="GOA:Q8IVF2"
/db_xref="H-InvDB:HIT000054889.14"
/db_xref="HGNC:HGNC:20125"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR036034"
/db_xref="PDB:4CN0"
/db_xref="UniProtKB/Swiss-Prot:Q8IVF2"
/protein_id="CAD98019.1"
/translation="VEVSLPSVETDVQAPGSMLDGARLEGDLSLAHEDVAGKDSKFQG
PKLSTSGFEWSSKKVSMSSSEIEGNVTFHEKTSAFPIVESVVHEGDLHDPSRDGNLGL
AVGEVGMDSKFKKLHFKVPKVSFSSTKTPKDSLVPGAKSSIGLSTIPLSSSGCSSFEL
QQVSACSEPSMQMPKVGFAGFPSSRLDLTGPHFESSILSPCEDVTLTKYQVTVPRAAL
APELALEIPSGSQADIPLPKTECSTDLQPPEGVPTSQAESHSGPLNSMIPVSLGQVSF
PKFYKPKFVFSVPQMAVPEGDLHAAVGAPVMSPLSPGERVQCPLPSTQLPSPGTCVSQ
GPEELVASLQTSVVAPGEAPSEDADHEGKGSPLKMPKIKLPSFRWSPKKETGPKVDPE
CSVEDSKLSLVLDKDEVAPQSAIHMDLPPERDGEKGRSTKPGFAMPKLALPKMKASKS
GVSLPQRDVDPSLSSATAGGSFQDTEKASSDGGRGGLGATASATGSEGVNLHRPQVHI
PSLGFAKPDLRSSKAKVEVSQPEADLPLPKHDLSTEGDSRGCGLEDVPVSQPCGEGIA
PTPEDPLQPSCRKPDAEVLTVESPEEEAMTKDSQESWFKMPKFRMPSLRRSFRDRGGA
GKLEVAQTQAPAATGGEAAAKVKEFLVSGSNVEAAMSLQLPEADAEVTASESKSSTDI
PRCDLDSTGLKLHLSTAGMTGDELSTSEVRIHPSKGPLPFQMPGMRLPETQVLPGEID
ETPLSKPGHDLASMEDKTEKWSSQPEGPLKLKASSTDMPSQISVVNVDQLWEDSVLTV
KFPKLMVPRFSFAAPSSEDDVFIPTVREVQCPEANIDTALCKESPGLWGASILKAGAG
VPGEQPVDLNLPLEAPPISKVRVHIQGAQVESQEVTIHSIVTPEFVDLSVPRTFSTQI
VRESEIPTSEIQTPSYGFSLLKVKIPEPHTQARVYTTMTQHSRTQEGTEEAPIQATPG
VDSISGDLQPDTGEPFEMISSSVNVLGQQTLTFEVPSGHQLADSCSDEEPAEILEFPP
DDSQEATTPLADEGRAPKDKPESKKSGLLWFWLPNIGFSSSVDETGVDSKNDVQRSAP
IQTQPEARPEAELPKKQEKAGWFRFPKLGFSSSPTKKSKSTEDGAELEEQKLQEETIT
FFDARESFSPEEKEEGELIGPVGTGLDSRVMVTSAARTELILPEQDRKADDESKGSGL
GPNEG"
regulatory 4418..4423
/regulatory_class="polyA_signal_sequence"
polyA_site 4439
BASE COUNT 1187 a 1124 c 1126 g 1021 t
ORIGIN
1 gtggaggtgt ctctgcccag cgtggagacg gatgtccagg ccccaggatc catgctggat
61 ggtgcgcggc ttgaggggga cctgtccctg gcccacgagg atgtagctgg gaaagacagt
121 aagtttcaag gaccaaaact gagcacgtct ggttttgaat ggtcgtcaaa gaaagtttcc
181 atgtcttcct ctgaaatcga aggaaatgtt acattccatg agaagacttc cgcatttccc
241 attgtggaat ctgttgttca tgaaggtgat cttcatgatc catctcgcga tggtaacttg
301 gggcttgctg ttggagaagt tggaatggat tcgaagttta agaaactgca ttttaaagtg
361 cccaaagttt cattttcttc taccaagact cctaaagata gtttagtccc aggtgcaaag
421 tctagcatag gtctttccac gattccttta tcatcttcag gatgctcaag ttttgaatta
481 caacaggttt cggcttgttc agagccatcc atgcagatgc ctaaggtggg ttttgctggg
541 tttccatcat cccggcttga tctcactggt cctcactttg aatcttctat tctctctccc
601 tgtgaggatg ttacacttac aaaataccag gtgactgttc ccagagctgc cttggcccct
661 gagcttgctc tggaaattcc ttctgggtct caggctgata ttcctcttcc caagacagag
721 tgctccactg acctgcagcc tccagaggga gttccaacat ctcaagctga gagtcactct
781 ggcccactga attccatgat tcctgtttct cttggtcagg tgtcttttcc taaattctat
841 aaaccaaagt ttgtgttttc agtcccccaa atggcagttc ctgagggaga cctacatgca
901 gcagtgggtg ccccagtcat gtctcctctt agccctggag aaagagtgca gtgccccttg
961 ccaagcaccc agctgccatc cccaggcacc tgtgtgtccc agggcccaga agagcttgtg
1021 gcctccttgc agacatcagt agtggcccct ggagaagccc cttctgaaga tgctgaccac
1081 gaagggaaag ggagtccctt gaaaatgcct aagattaagc ttccatcatt taggtggtcc
1141 ccgaagaagg aaacagggcc aaaggtggac ccagaatgca gcgtggagga ctcaaaactc
1201 agcctggttt tagacaagga tgaagtggcc ccgcagtctg ccatccacat ggatctgcct
1261 cctgagaggg atggagagaa ggggaggagc acaaagcctg gctttgccat gccaaaactt
1321 gcacttccca aaatgaaggc ttctaagagt ggggtcagcc tgccacagag agacgtggat
1381 ccttcccttt ctagtgccac agcagggggt agctttcaag acacagaaaa ggccagcagt
1441 gacggtggta ggggaggact tggtgcaaca gcaagtgcca caggaagtga gggtgtgaac
1501 ctccaccggc cacaggtcca cattcccagt ttgggctttg ccaaacctga tctcagatcc
1561 tccaaggcca aggtggaggt gagccagcct gaagctgacc tgcctcttcc caaacatgat
1621 ctgtctaccg aaggtgacag cagaggatgt gggctcgagg atgtcccagt gagccagcct
1681 tgtggggagg ggatagcccc cacacctgaa gatcccctcc agccatcctg tagaaaacca
1741 gatgctgaag tcctcacagt ggaaagccca gaggaggaag ccatgaccaa ggactcgcag
1801 gaaagctggt ttaaaatgcc caagttccgc atgcccagcc ttaggcgctc tttcagggac
1861 agaggcgggg ctggaaagct ggaagtggct cagacacagg caccggcagc aacagggggt
1921 gaagcagcag ctaaagtcaa agagttcctt gtttctgggt caaacgtgga ggcagctatg
1981 tccctacagc tcccagaggc ggatgcagaa gtgacagctt ctgagagcaa atcatccaca
2041 gatattccaa ggtgtgatct tgacagcaca ggcttgaagc tgcacctttc cactgctggg
2101 atgactgggg atgagctttc cacttctgag gtcaggatcc atccatccaa aggacctctc
2161 ccttttcaga tgcctggcat gaggcttcca gaaacccagg ttcttccagg agaaatagat
2221 gagactcctc tttccaagcc aggacatgac cttgccagca tggaggataa aacagagaaa
2281 tggtcttccc agcctgaagg tccacttaaa ttgaaagctt caagtactga tatgccatcc
2341 cagatttctg tggttaatgt ggatcaactg tgggaagatt ctgtcctaac tgtcaaattc
2401 cccaaattaa tggtaccaag gttctccttc gctgccccca gctcagagga tgatgtgttc
2461 atccccactg tgagggaagt gcagtgtcca gaggccaata ttgatacagc cctttgtaag
2521 gaaagtccgg ggctctgggg agccagcatc ctgaaggcag gtgctggggt ccctggggag
2581 cagcctgtgg accttaacct gcctttggaa gctcccccaa tttcaaaggt cagagtgcat
2641 attcagggtg ctcaggttga aagtcaagag gtcactatac acagcatagt gacaccagag
2701 tttgtagatc tctcagtacc caggactttt tccactcaga ttgtgcggga atcagagatc
2761 cccacgtcag agattcaaac accttcgtac ggattttcct tattaaaagt gaaaatccca
2821 gagccccaca cgcaggctag agtgtacaca acaatgactc aacactctag gactcaggag
2881 ggcacagaag aggctcccat acaagccacc ccaggagtag actccatttc tggagatctc
2941 cagcctgaca ctggagaacc atttgagatg atctcttcca gcgtcaatgt actgggacag
3001 caaacactca catttgaagt tccttctggc caccagcttg cagacagctg ttcagatgag
3061 gagccagcag aaattcttga gtttccccct gatgatagcc aagaggcaac cacaccactg
3121 gcagatgaag gcagggctcc aaaagacaaa ccagaaagta aaaaatctgg tctgctctgg
3181 ttttggcttc caaacattgg gttttcctct tctgttgatg agacaggtgt tgattccaaa
3241 aatgacgtcc agagatctgc tcccattcaa acacagcctg aggcacgacc agaggcagaa
3301 ctgcctaaaa aacaggagaa ggcaggctgg ttccgatttc ccaaattagg gttctcctca
3361 tctcctacca agaaaagcaa aagcaccgaa gatggggcag agctggaaga acaaaaactt
3421 caagaagaaa caatcacgtt ttttgatgcc cgagaaagtt tctcccctga agagaaggaa
3481 gagggtgaac tgatcgggcc tgtgggcact gggctggact ccagagtgat ggtgacatcc
3541 gcggcaagaa cagagttaat cctgcccgag caggacagaa aagctgacga tgaaagcaaa
3601 gggtcaggcc tgggaccaaa tgaaggctga gaggtatggc tcatcggtac aagagagatg
3661 caaaaaacta agttggaaag taaaggctac acacacatat ggagcacccc atcccacagc
3721 acattacatc cacctcactt cacagaacgg agaacagagc agaaatgacc agaacacctt
3781 tgtcaccatc acacagccct cctaaaatgg aaccaaagct tcccagctcc ctcaaagctt
3841 tggatgcaaa gaaggcaccc tgacttccac aagacaccag aattcacacg gtactcagag
3901 gcactgctgg ggaagtttgt tggtctttat tagataaatt tccagagacc tgtccataat
3961 acccaacaga acatgactgt ttctttgagg aaagggttat aatgtctgtg gtgtacaagt
4021 cgtttttggt ataacttctt tcctgctgct gctgcttccc ggcaaacata gttttcctat
4081 ttcaggcaga gtgcggtata ttccaggaaa cactgtttcc tactcactta gcttacttct
4141 ttgttgaatg cctcactaat ggcaagtttc aagatgtttt gggtgacaat gcacacatgc
4201 tgggcaaaag ggtgatggcc agtggctggc agctgggcca gcggaagcta ggacatctgt
4261 gagttgtcat tctcatctat ccatgtccac tggcctgcca gcatccgcca gtgccttgcc
4321 agtgtgcacg gtcccacact gtggcccctg agtcccctaa tgtacacgct gcagccagaa
4381 tgcagatgga gctggcttgg ctgttccctg gatgggcaat aaagaaagtg ctgcatccca
4441 aaaaaaaaaa aaaaaaca
//