LOCUS BX538079 1687 bp mRNA linear HTC 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686N07218 (from clone DKFZp686N07218).
ACCESSION BX538079
VERSION BX538079.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1687)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-FEB-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp686N07218) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686N07218
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..1687
/db_xref="H-InvDB:HIT000054863"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686N07218"
/tissue_type="rectum tumor"
/note="microspherule protein 1, differentially spliced"
/db_xref="taxon:9606"
CDS 510..1325
/codon_start=1
/gene="DKFZp686N07218"
/product="hypothetical protein"
/db_xref="GOA:Q96EZ8"
/db_xref="H-InvDB:HIT000054863.14"
/db_xref="HGNC:HGNC:6960"
/db_xref="InterPro:IPR000253"
/db_xref="InterPro:IPR008984"
/db_xref="InterPro:IPR025999"
/db_xref="InterPro:IPR037912"
/db_xref="UniProtKB/Swiss-Prot:Q96EZ8"
/protein_id="CAD98003.1"
/translation="MRQLHPEAIAAIQSKALFSKAEEQLLSKVGSTSQPTLETFQDLL
HRHPDAFYLARTAKALQAHWQLMKQYYLLEDQTVQPLPKGDQVLNFSDAEDLIDDSKL
KDMRDEVLEHELMVADRRQKREIRQLEQELHKWQVLVDSITGMSSPDFDNQTLAVLRG
RMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGR
RPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLIALIRAEAAKITPQ"
BASE COUNT 396 a 486 c 475 g 330 t
ORIGIN
1 ggacgtacct cacggaagcc ggctttggcc ctgcggctgc taccgtcgcc gcggagaaat
61 tgttggatct ggcagtctag gaatggttca tcaagaggaa gaagttcgat gatgagctgg
121 tggagagcag cctggcaaaa tcctctaccc gggcaaaggg ggccagtggg gtggaaccag
181 ggcgctgttc ggggagtgaa ccctcctcca gtgagaagaa gaaggtatcc aaagccccca
241 gcactcctgt gccacccagc ccagccccag cccctggact caccaagcgt gtgaagaaga
301 gtaaacagcc acttcaggtg accaaggatc tgggccgctg gaagcctgca gatgacctcc
361 tgctcataaa tgctgtgttg cagaccaacg acctgacctc cgtccacctg ggcgtgaaat
421 tcagctgccg cttcaccctt cgggaggtcc aggagcgttg gtacgccctg ctctacgatc
481 ctgtcatctc caagttggcc tgtcaggcca tgaggcagct gcacccagag gctattgcag
541 ccatccagag caaggccctg tttagcaagg ctgaggagca gctgctgagc aaagtgggat
601 cgaccagcca gcccaccttg gagaccttcc aggacctgct gcacagacac cctgatgcct
661 tctacctggc ccgtaccgcg aaggccctgc aggcccactg gcagctcatg aagcagtatt
721 acctgctgga ggaccagaca gtgcagccgc tgcccaaagg ggaccaagtg ctgaacttct
781 ctgatgcaga ggacctgatt gatgacagta agctcaagga catgcgagat gaggtcctgg
841 aacatgagct gatggtggct gaccggcgcc agaagcgaga gattcggcag ctggaacagg
901 aactgcataa gtggcaggtg ctagtggaca gcatcacagg catgagctct ccggacttcg
961 acaaccagac actggcagtg ctgcggggcc gcatggtgcg gtacctgatg cgctcgcgtg
1021 agatcaccct gggcagagca accaaggata accagattga tgtggacctg tctctggagg
1081 gtccggcctg gaagatatcc cggaaacaag gtgtcatcaa gctgaagaac aacggtgatt
1141 tcttcattgc caatgagggt cgacggccca tctacatcga tggacggccg gtgctctgtg
1201 gctccaaatg gcgcctcagc aacaactctg tggtggagat cgccagcctg cgattcgtct
1261 tccttatcaa ccaggacctc attgccctca tcagggctga ggctgccaag atcacaccac
1321 agtgaggagt ggtggcagga ctcgtgggcc ctctccggcc tgtttcccct gccactccag
1381 cccccttgag ctgggaactc aggctcctgg aaaaacctgg gcagtgggag gctcagctgc
1441 gggccattga tttgagcctt tgagggagga tagggctggc ctttgtgaag ccagcagagg
1501 ctgagaacct caggcttccc tagatccaga gcccctcccc atcttcctct ctctaaaaac
1561 aaccctaccc cccattgcca ccttcactcc tgtgtctcca gctgattagc ctcagactct
1621 tcttttattg tttttctttt gtaaataaaa agcaccaggt tccaaagaaa aaaaaaaaaa
1681 aaaaaca
//