LOCUS BX538077 1550 bp mRNA linear HUM 17-APR-2005
DEFINITION Homo sapiens mRNA; cDNA DKFZp686C02218 (from clone DKFZp686C02218);
complete cds.
ACCESSION BX538077
VERSION BX538077.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1550)
AUTHORS Bloecker H., Boecher M., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology
Ltd., Braunschweig/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686C02218) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..1550
/db_xref="H-InvDB:HIT000054861"
/organism="Homo sapiens"
/map="14q32.33"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686C02218"
/tissue_type="human rectum tumor"
/db_xref="taxon:9606"
CDS <1..1481
/codon_start=3
/gene="DKFZp686C02218"
/product="hypothetical protein"
/note="immunoglobulin heavy chain variant"
/db_xref="InterPro:IPR003006"
/db_xref="InterPro:IPR003597"
/db_xref="InterPro:IPR003599"
/db_xref="InterPro:IPR007110"
/db_xref="InterPro:IPR013106"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036179"
/db_xref="UniProtKB/TrEMBL:Q7Z374"
/protein_id="CAD98001.1"
/translation="CFLRVMDLMCKKMKHLWFFLLLVAAPRWVLSQLQLQESGPGLVK
PSETLSLTCTVSGGSVSNRNYYWGWIRQPPGKGLEWIGSIYYNENTYYSPSLKSRLTI
FVDTSKNHFSLRLTSVTAADTAVYYCVRHVEGPYGWFDPWGQGTLVTVSSASPTSPKV
FPLSLDSTPQDGNVVVACLVQGFFPQEPLSVTWSESGQNVTARNFPPSQDASGDLYTT
SSQLTLPATQCPDGKSVTCHVKHYTNPSQDVTVPCPVPPPPPCCHPRLSLHRPALEDL
LLGSEANLTCTLTGLRDASGATFTWTPSSGKSAVQGPPERDLCGCYSVSSVLPGCAQP
WTHGETFTCTAAHPELKTPLTANITKSGNTFRPEVHLLPPPSEELALNELVTLTCLAR
GFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTF
SCMVGHEALPLAFTQKTIDRLAGKPTHVNVSVVMAEVDGTCY"
regulatory 1506..1511
/regulatory_class="polyA_signal_sequence"
polyA_site 1525
BASE COUNT 326 a 522 c 425 g 277 t
ORIGIN
1 gatgctttct gagagtcatg gatctcatgt gcaagaaaat gaagcacctg tggttcttcc
61 tcctgctggt ggcggctccc agatgggtcc tgtcccagct gcagctgcag gagtcgggcc
121 caggactggt gaagccttcg gagaccctgt ccctcacctg cactgtctct gggggctccg
181 tcagcaatag aaattactac tggggctgga tccgccagcc cccagggaag gggctggagt
241 ggattggaag tatctattat aatgagaaca cctactacag cccgtccctc aagagtcgac
301 tcaccatatt cgtagacacg tccaagaacc acttctccct gaggctgacc tctgtgaccg
361 ccgcagacac ggctgtgtat tactgtgtga gacatgtgga gggtccttat ggctggttcg
421 acccctgggg ccagggaacc ctggtcacag tctcctcagc atccccgacc agccccaagg
481 tcttcccgct gagcctcgac agcacccccc aagatgggaa cgtggtcgtc gcatgcctgg
541 tccagggctt cttcccccag gagccactca gtgtgacctg gagcgaaagc ggacagaacg
601 tgaccgccag aaacttccca cctagccagg atgcctccgg ggacctgtac accacgagca
661 gccagctgac cctgccggcc acacagtgcc cagacggcaa gtccgtgaca tgccacgtga
721 agcactacac gaatcccagc caggatgtga ctgtgccctg cccagttccc ccacctcccc
781 catgctgcca cccccgactg tcgctgcacc gaccggccct cgaggacctg ctcttaggtt
841 cagaagcgaa cctcacgtgc acactgaccg gcctgagaga tgcctctggt gccaccttca
901 cctggacgcc ctcaagtggg aagagcgctg ttcaaggacc acctgagcgt gacctctgtg
961 gctgctacag cgtgtccagt gtcctgcctg gctgtgccca gccatggacc catggggaga
1021 ccttcacctg cactgctgcc caccccgagt tgaagacccc actaaccgcc aacatcacaa
1081 aatccggaaa cacattccgg cccgaggtcc acctgctgcc gccgccgtcg gaggagctgg
1141 ccctgaacga gctggtgacg ctgacgtgcc tggcacgcgg cttcagcccc aaggatgtgc
1201 tggttcgctg gctgcagggg tcacaggagc tgccccgcga gaagtacctg acttgggcat
1261 cccggcagga gcccagccag ggcaccacca ccttcgctgt gaccagcata ctgcgcgtgg
1321 cagccgagga ctggaagaag ggggacacct tctcctgcat ggtgggccac gaggccctgc
1381 cgctggcctt cacacagaag accatcgacc gcttggcggg taaacccacc catgtcaatg
1441 tgtctgttgt catggcggag gtggacggca cctgctactg agccgcccgc ctgtccccac
1501 ccctgaataa actccatgct cccccaagca aaaaaaaaaa aaaaaaaaca
//