LOCUS BX538044 4527 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686B15150 (from clone DKFZp686B15150).
ACCESSION BX538044
VERSION BX538044.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4527)
AUTHORS Bloecker H., Boecher M., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology
Ltd., Braunschweig/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686B15150) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4527
/db_xref="H-InvDB:HIT000054828"
/organism="Homo sapiens"
/map="4q35.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686B15150"
/tissue_type="human colon endothel primary cell culture"
/db_xref="taxon:9606"
CDS <1..3558
/codon_start=1
/gene="DKFZp686B15150"
/product="hypothetical protein"
/note="hypothetical protein"
/db_xref="GOA:Q7Z392"
/db_xref="H-InvDB:HIT000054828.15"
/db_xref="HGNC:HGNC:25751"
/db_xref="InterPro:IPR021773"
/db_xref="InterPro:IPR025876"
/db_xref="UniProtKB/Swiss-Prot:Q7Z392"
/protein_id="CAD97983.1"
/translation="GWNWLWGCGGGDGPRRSVTSPRLPSSSPGWRRPASAAAGPGRGA
WVFCDIINMSPTQWDFPVELCCRPMAFVTLTGLDVVYNAVHRAVWDAFCANRRADRVP
ISFKVLPGDHEYPKCRPKRTSYEWYIPKGILKTGWMNKHLNLVPALVVVFYELDWDEP
QWKEKQSECATRVEIVRQSLQGRNTKVAVVLIQKKTPLPPGEDVIASERAAALCNACE
LSGKSLFVLPHTDHLVGYIIRLENAFYEHAQTYYYTEIRRVKSHKEFLNKTTHQLLFV
RHQFKIAFFSELKQDTQNALKNYRTAYNLVHELRAHETNILEIKTMAGFINYKICRLC
FQHNTPLDAIAQFRKHIDLCKKKIGSAELSFEHDAWMSKQFQAFGDLFDEAIKLGLTA
IQTQNPGFYYQQAAYYAQERKQLAKTLCNHEASVMYPNPDPLETQTGVLDFYGQRSWR
QGILSFDLSDPEKEKVGILAIQLKERNVVHSEIIITLLSNAVAQFKKYKCPRMKSHLM
VQMGEEYYYAKDYTKALKLLDYVMCDYRSEGWWTLLTSVLTTALKCSYLMAQLKDYIT
YSLELLGRASTLKDDQKSRIEKNLINVLMNESPDPEPDCDILAVKTAQKLWADRISLA
GSNIFTIGVQDFVPFVQCKAKFHAPSFHVDVPVQFDIYLKADCPHPIRFSKLCVSFNN
QEYNQFCVIEEASKANEVLENLTQGKMCLVPGKTRKLLFKFVAKTEDVGKKIEITSVD
LALGNETGRCVVLNWQGGGGDAASSQEALQAARSFKRRPKLPDNEVHWDSIIIQASTM
IISRVPNISVHLLHEPPALTNEMYCLVVTVQSHEKTQIRDVKLTAGLKPGQDANLTQK
THVTLHGTELCDESYPALLTDIPVGDLHPGEQLEKMLYVRCGTVGSRMFLVYVSYLIN
TTVEEKEIVCKCHKDETVTIETVFPFDVAVKFVSTKFEHLERVYADIPFLLMTDLLSA
SPWALTIVSSELQLAPSMTTVDQLESQVDNVILQTGESASECFCLQCPSLGNIEGGVA
TGHYIISWKRTSAMENIPIITTVITLPHVIVENIPLHVNADLPSFGRVRESLPVKYHL
QNKTDLVQDVEISVEPSDAFMFSGLKQIRLRILPGTEQEMLYNFYPLMAGYQQLPSLN
INLLRFPNFTNQLLRRFLPTSIFVKPQGRLMDDTSIAAA"
regulatory 4483..4488
/regulatory_class="polyA_signal_sequence"
polyA_site 4502
BASE COUNT 1365 a 895 c 989 g 1278 t
ORIGIN
1 ggttggaact ggctgtgggg ctgcggcggt ggggacgggc cacggcgttc tgtgacatcc
61 ccccgcctcc cctcgtcttc tcccggctgg cggcgaccgg cctcagctgc agcgggcccg
121 gggcgtgggg cctgggtttt ttgtgacatc ataaacatga gccccacaca gtgggacttc
181 cctgtggaat tatgttgccg gcctatggcc tttgttactc taacgggcct ggatgtagtt
241 tataatgcag tccatcgagc tgtctgggac gccttctgtg caaatcggag agctgatcga
301 gtaccaattt ctttcaaggt gctcccaggt gaccatgagt atcccaaatg tagacccaag
361 agaacttcat atgagtggta cattcctaaa gggatcttaa agactggctg gatgaataag
421 catctgaatc tggtgccagc cctggtggtt gtgttctatg aactggactg ggatgagcct
481 cagtggaaag aaaagcagtc tgagtgcgcc accagagtgg aaatagtcag gcaaagttta
541 caaggaagaa acacaaaagt tgcagtggtt ctgattcaga agaaaacccc tttgccccca
601 ggagaagatg tcattgcttc agaaagggct gcagctttat gcaatgcatg tgaactctca
661 ggaaagtctt tgtttgtact gccgcacact gaccaccttg tgggttatat tataagattg
721 gaaaatgcct tttatgaaca tgcacagact tattactaca ctgagatcag aagagtgaaa
781 tctcataaag aatttttgaa taaaacaaca caccagcttt tatttgttag gcatcagttc
841 aaaatagctt tcttcagtga gttgaaacaa gatacacaaa atgcgctgaa gaattatagg
901 accgcctata atcttgtaca cgaattgaga gcccatgaaa ctaatattct ggaaattaag
961 actatggcag gatttataaa ctacaagatc tgtaggctgt gttttcaaca caacacccca
1021 ttggatgcaa ttgctcagtt ccgaaaacac atagacttgt gtaagaaaaa gattggaagt
1081 gcggagctgt cttttgagca tgatgcatgg atgtctaaac aattccaggc ctttggagat
1141 ttatttgatg aagctattaa gttagggtta acagctattc aaactcagaa tcctggtttc
1201 tattaccagc aggcagcata ctatgcccag gagcggaaac agcttgcaaa aaccctctgt
1261 aaccacgaag cttctgtaat gtatcccaat cctgatccct tagaaacaca aacaggcgtt
1321 cttgactttt atggacaaag atcatggcga caaggaatac taagttttga tctttctgat
1381 cctgaaaaag aaaaggtggg aattcttgcc attcagctga aggagagaaa tgttgttcac
1441 tctgagataa tcataactct tctgagcaat gctgttgcac agttcaagaa gtataagtgc
1501 ccgcgaatga aaagtcacct aatggttcag atgggagagg aatattatta cgcaaaggat
1561 tataccaaag ctttgaagtt gctggattat gtgatgtgtg attatcggag tgaaggatgg
1621 tggactctgc tcacttctgt attaactaca gctctgaagt gctcctacct catggcccaa
1681 ttaaaggatt acattactta ctccctagaa ctccttggta gagcttcaac tctgaaagat
1741 gaccagaagt ctcggataga aaagaacctc ataaatgttt taatgaatga aagtcctgat
1801 ccagaacccg actgtgatat cttagctgtg aaaactgctc agaagctgtg ggcagaccga
1861 atttctctgg ctggcagcaa tattttcaca ataggagtac aggactttgt gccatttgtg
1921 cagtgcaaag ccaagtttca tgccccaagt tttcatgttg atgttcctgt tcagtttgat
1981 atttatctga aggctgattg tccacatccc attaggtttt ccaagctctg tgtcagcttt
2041 aataatcagg aatacaacca gttctgtgta atagaagaag catccaaagc aaatgaagtt
2101 ttagaaaatc tgactcaagg aaagatgtgc ctagttcctg gcaaaacaag aaaactgtta
2161 tttaagtttg ttgcaaaaac tgaagatgtg ggaaagaaaa ttgagattac ttcagtggat
2221 cttgctctgg gcaatgagac gggaagatgt gtggttttaa attggcaggg aggaggagga
2281 gatgctgctt cctcccaaga agccttacag gcagctcggt ctttcaaaag gcgacctaag
2341 ctacctgaca atgaagttca ctgggacagc attataattc aggcaagcac aatgatcata
2401 tccagagtcc caaacatttc tgtacatctg ctacatgaac cccctgcact gactaatgaa
2461 atgtattgtt tggttgtgac tgttcagtcc catgaaaaga cccaaatcag agatgtgaag
2521 ctcaccgctg gcttaaaacc aggacaggat gccaatttaa ctcagaagac tcacgtgact
2581 cttcatggaa cagaactgtg tgatgaatcc tacccggctt tactcactga cattcctgtt
2641 ggagacttac atccagggga acagctggaa aaaatgttgt atgttcgctg tggaacagtg
2701 ggttccagaa tgtttcttgt atatgtttct tacctgataa atacaaccgt tgaagaaaaa
2761 gaaattgttt gcaagtgtca caaggatgaa actgtaacaa ttgaaacagt ctttccattt
2821 gatgttgcgg ttaaatttgt ttctaccaag tttgagcacc tggaaagggt ttatgctgac
2881 atcccctttc tgttgatgac ggacctctta agtgcctcac cctgggccct cactattgtt
2941 tccagtgagc tccagcttgc tccatccatg accacagtgg accagctcga gtctcaagtg
3001 gacaatgtta tcttacagac tggagagagt gctagtgaat gcttttgtct tcaatgccca
3061 tctcttggaa atattgaagg tggagtagca accgggcatt atattatctc ttggaaaagg
3121 acctcagcaa tggagaatat ccccatcatc acaactgtca tcactctgcc gcacgtgatt
3181 gtggagaata tccctctcca tgtgaatgca gatctgccgt catttgggcg tgtcagagag
3241 tcgttacctg tcaagtatca cctacagaat aagaccgact tagttcaaga tgtagaaatt
3301 tctgtggagc ccagtgatgc cttcatgttc tcaggtctca aacagattcg attacgtatc
3361 ctccctggca cggagcagga aatgctatat aatttctatc ctctgatggc tggataccag
3421 cagctgccat ctctcaacat caacttgctt agatttccta acttcacaaa tcagctgctc
3481 aggcgttttt tacctaccag tatttttgtc aagccacagg gtcgactcat ggatgatacc
3541 tctattgctg ctgcatgatg ttcaagaccg gcccttggct gttgttacag agatgttggg
3601 cagagctatg caggtgtttc attgtgaact ctagctttga tcatggtaaa aagttaacct
3661 tttctatttt ttaatggatg ttataccaac tattcagagg aactcatact tcaaaaatat
3721 taggaaaatc tgtcttatag tttctctaat aaatatctga aatctcagta cgacatgaaa
3781 gaatgtcaga ccattgttat tgttgaaagt catttgatga atggtaaatt ctatgaaaag
3841 taagtgattt gcatgtataa tatcaggaaa attaagcatc ccaagtgtga ctggacaaag
3901 agagcagatg caccagtgcc tgtgccataa agttccgaat cccccatgtg tctctttcag
3961 agctggccag accggaaata aatcattctc ataaattcag tgtgtactca gaacacatac
4021 acaacaacat agggagttgt atgactgata cggaaaactt ccagaaagtt ttaatcaaag
4081 cagtttaatt aaggtatcaa aaatatcttt gcttactatc aagaagtgtc aaataggttc
4141 agcttgctgc caaaatatgg atcatttatg aagcaggttc atattttaga ggtgttaata
4201 aaatcctcat cggaaaagat ccaaagtgca aggatttgat tataaacata atttcctaga
4261 ctgaaagttt ttggaaaaga tgcagggtct gagtcaggcc ttctggttat attgtgcagt
4321 ttcaaaagaa ctatttaaaa ctcttgaaaa ctcatgtaaa taaaaatcat agggtgaaaa
4381 ttgtatttgt taaaatacct taataattta aaatgacctg atttcctgga aaattttatt
4441 attcaaaagg tggaggcatt gtaaaaagga aatagtgatg taaataaaca tgttctcttt
4501 cgagtaaaaa aaaaaaaaaa aaaaaca
//