LOCUS BX538040 3992 bp mRNA linear HUM 17-JUN-2003
DEFINITION Homo sapiens mRNA; cDNA DKFZp686E13145 (from clone DKFZp686E13145).
ACCESSION BX538040
VERSION BX538040.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3992)
AUTHORS Bloecker H., Boecher M., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology
Ltd., Braunschweig/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp686E13145) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3992
/db_xref="H-InvDB:HIT000054824"
/organism="Homo sapiens"
/map="14q32.33"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686E13145"
/tissue_type="human colon endothel primary cell culture"
/db_xref="taxon:9606"
CDS <1..3164
/codon_start=3
/gene="DKFZp686E13145"
/product="hypothetical protein"
/note="hypothetical protein, N-terminus truncated"
/db_xref="GOA:Q8IVF2"
/db_xref="H-InvDB:HIT000054824.14"
/db_xref="HGNC:HGNC:20125"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR036034"
/db_xref="PDB:4CN0"
/db_xref="UniProtKB/Swiss-Prot:Q8IVF2"
/protein_id="CAD97981.1"
/translation="SFELQQVSACSEPSMQMPKVGFAGFPSSRLDLTGPHFESSILSP
CEDVTLTKYQVTVPRAALAPELALEIPSGSQADIPLPKTECSTDLQPPEGVPTSQAES
HSGPLNSMIPVSLGQVSFPKFYKPKFVFSVPQMAVPEGDLHAAVGAPVMSPLSPGERV
QCPLPSTQLPSPGTCVSQGPEELVASLQTSVVAPGEAPSEDADHEGKGSPLKMPKIKL
PSFRWSPKKETGPKVDPECSVEDSKLSLVLDKDEVAPQSAIHMDLPPERDGEKGRSTK
PGFAMPKLALPKMKASKSGVSLPQRDVDPSLSSATAGGSFQDTEKASSDGGRGGLGAT
ASATGSEGVNLHRPQVHIPSLGFAKPDLRSSKAKVEVSQPEADLPLPKHDLSTEGDSR
GCGLEDVPVSQPCGEGIAPTPEDPLQPSCRKPDAEVLTVESPEEEAMTKDSQESWFKM
PKFRMPSLRRSFRDRGGAGKLEVAQTQAPAATGGEAAAKVKEFLVSGSNVEAAMSLQL
PEADAEVTASESKSSTDILRCDLDSTGLKLHLSTAGMTGDELSTSEVRIHPSKGPLPF
QMPGMRLPETQVLPGEIDETPLSKPGHDLASMEDKTEKWSSQPEGPLKLKASSTDMPS
QISVVNVDQLWEDSVLTVKFPKLMVPRFSFAAPSSEDDVFIPTVREVQCPEANIDTAL
CKESPGLWGASILKAGAGVPGEQPVDLNLPLEAPPISKVRVHIQGAQVESQEVTIHSI
VTPEFVDLSVPRTFSTQIVRESEIPTSEIQTPSYGFSLLKVKIPEPHTQARVYTTMTQ
HSRTQEGTEEAPIQATPGVDSISGDLQPDTGEPFEMISSSVNVLGQQTLAFEVPSGHQ
LADSCSDEEPAEILEFPPDDSQEATTPLADEGRAPKDKPESKKSGLLWFWLPNIGFSS
SVDETGVDSKNDVQRSAPIQTQPEARPEAELPKKQEKAGWFRFPKLGFSSSPTKKSKS
TEDGAELEEQKLQEETITFFDARESFSPEEKEEGELIGPVGTGLDSRVMVTSAARTEL
ILPEQDRKADDESKGSGLGPNEG"
regulatory 3952..3957
/regulatory_class="polyA_signal_sequence"
polyA_site 3973
BASE COUNT 1073 a 1027 c 1005 g 887 t
ORIGIN
1 caagttttga attacaacag gtttcggctt gttcagagcc atccatgcag atgcctaagg
61 tgggttttgc tgggtttcca tcatcccggc ttgatctcac tggtcctcac tttgaatctt
121 ctattctctc tccctgtgag gatgttacac ttacaaaata ccaggtgact gttcccagag
181 ctgccttggc ccctgagctt gctctggaaa ttccttctgg gtctcaggct gatattcctc
241 ttcccaagac agagtgctcc actgacctgc agcctccaga gggagttcca acatctcaag
301 ctgagagtca ctctggccca ctgaattcca tgattcctgt ttctcttggt caggtgtctt
361 ttcctaaatt ctataaacca aagtttgtgt tttcagtccc ccaaatggca gttcctgagg
421 gagacctaca tgcagcagtg ggtgccccag tcatgtctcc tcttagccct ggagaaagag
481 tgcagtgccc cttgccaagc acccagctgc catccccagg cacctgtgtg tcccagggcc
541 cagaagagct tgtggcctcc ttgcagacat cagtagtggc ccctggagaa gccccttctg
601 aagatgctga ccacgaaggg aaagggagtc ccttgaaaat gcctaagatt aagcttccat
661 catttaggtg gtccccgaag aaggaaacag ggccaaaggt ggacccagaa tgcagcgtgg
721 aggactcaaa actcagcctg gttttagaca aggatgaagt ggccccgcag tctgccatcc
781 acatggatct gcctcctgag agggatggag agaaggggag gagcacaaag cctggctttg
841 ccatgccaaa acttgcactt cccaaaatga aggcttctaa gagtggggtc agcctgccac
901 agagagacgt ggatccttcc ctttctagtg ccacagcagg gggtagcttt caagacacag
961 aaaaggccag cagtgacggt ggtaggggag gacttggtgc aacagcaagt gccacaggaa
1021 gtgagggtgt gaacctccac cggccacagg tccacattcc cagcttgggc tttgccaaac
1081 ctgatctcag atcctccaag gccaaggtgg aggtgagcca gcctgaagct gacctgcctc
1141 ttcccaaaca tgatctgtct accgaaggtg acagcagagg atgtgggctc gaggatgtcc
1201 cagtgagcca gccttgtggg gaggggatag cccccacacc tgaagatccc ctccagccat
1261 cctgtagaaa accagatgct gaagtcctca cagtggaaag cccagaggag gaagccatga
1321 ccaaggactc gcaggaaagc tggtttaaaa tgcccaagtt ccgcatgccc agccttaggc
1381 gctctttcag ggacagaggc ggggctggaa agctggaagt ggctcagaca caggcaccgg
1441 cagcaacagg gggtgaagca gcagctaaag tcaaagagtt ccttgtttct gggtcaaacg
1501 tggaggcagc tatgtcccta cagctcccag aggcagatgc agaagtgaca gcttctgaga
1561 gcaaatcatc cacagatatt ctaaggtgtg atcttgacag cacaggcttg aagctgcacc
1621 tttccactgc tgggatgact ggggatgagc tttccacttc tgaggtcagg atccatccat
1681 ccaaaggacc tctccctttt cagatgcctg gcatgaggct tccagaaacc caggttcttc
1741 caggagaaat agatgagact cctctttcca agccaggaca tgaccttgcc agcatggagg
1801 ataaaacaga gaaatggtct tcccagcctg aaggtccact taaattgaaa gcttcaagta
1861 ctgatatgcc atcccagatt tctgtggtta atgtggatca actgtgggaa gattctgtcc
1921 taactgtcaa attccccaaa ttaatggtac caaggttctc cttcgctgcc cccagctcag
1981 aggatgatgt gttcatcccc actgtgaggg aagtgcagtg tccagaggcc aatattgata
2041 cagccctttg taaggaaagt ccggggctct ggggagccag catcctgaag gcaggtgctg
2101 gggtccctgg ggagcagcct gtggacctta acctgccttt ggaagctccc ccaatttcaa
2161 aggtcagagt gcatattcag ggtgctcagg ttgaaagtca agaggtcact atacacagca
2221 tagtgacacc agagtttgta gatctctcag tacccaggac tttttccact cagattgtgc
2281 gggaatcaga gatccccacg tcagagattc aaacaccttc gtacggattt tccttattaa
2341 aagtgaaaat cccagagccc cacacgcagg ctagagtgta cacaacaatg actcaacact
2401 ctaggactca ggagggcaca gaagaggctc ccatacaagc caccccagga gtagactcca
2461 tttctggaga tctccagcct gacactggag aaccatttga gatgatctct tccagcgtca
2521 atgtactggg acagcaaaca ctcgcatttg aagttccttc tggccaccag cttgcagaca
2581 gctgttcaga tgaggagcca gcagaaattc ttgagtttcc ccctgatgat agccaagagg
2641 caaccacacc actggcagat gaaggcaggg ctccaaaaga caaaccagaa agtaaaaaat
2701 ctggtctgct ctggttttgg cttccaaaca ttgggttttc ctcttctgtt gatgagacag
2761 gtgttgattc caaaaatgac gtccagagat ctgctcccat tcaaacacag cctgaggcac
2821 gaccagaggc agaactgcct aaaaaacagg agaaggcagg ctggttccga tttcccaaat
2881 tagggttctc ctcatctcct accaagaaaa gcaaaagcac cgaagatggg gcagagctgg
2941 aagaacaaaa acttcaagaa gaaacaatca cgttttttga tgcccgagaa agtttctccc
3001 ctgaagagaa ggaagagggt gaactgatcg ggcctgtggg cactgggctg gactccagag
3061 tgatggtgac atccgcggca agaacagagt taatcctgcc cgagcaggac agaaaagctg
3121 acgatgaaag caaagggtca ggcctgggac caaatgaagg ctgagaggta tggctcatcg
3181 gtacaagaga gatgcaaaaa actaagttgg aaagtaaagg ctacacacac atatggagca
3241 ccccatccca cagcacatta catccacctc acttcacaga acggagaaca gagcagaaat
3301 gaccagaaca cctttgtcac catcacacag ccctcctaaa atggaaccaa agcttcccag
3361 ctccctcaaa gctttggatg caaagaaggc accctgactt ccacaagaca ccagaattca
3421 cacggtactc agaggcactg ctggggaagt ttgttggtct ttattagata aatttccaga
3481 gacctgtcca taatacccaa cagaacatga ctgtttcttt gaggaaaggg ttataatgtc
3541 tgtggtgtac aagtcgtttt tggtataact tctttcctgc tgctgctgct tcccggcaaa
3601 catagttttc ctatttcagg cagagtgcgg tatattccag gaaacactgt ttcccactca
3661 cttagcttac ttctttgttg aatgcctcac taatggcaag tttcaagatg ttttgggtga
3721 caatgcacac atgctgggca aaagggtgat ggccagtggc tggcagctgg gccagcggaa
3781 gctaggacat ctgtgagttg tcattctcat ctatccatgt ccactggcct gccagcatcc
3841 gccagtgcct tgccagtgtg cacggtccca cactgtggcc cctgagtccc ctaatgtaca
3901 cgctgcagcc agaatgcaga tggagctggc ttggctgttc cctggatggg caataaagaa
3961 agtgctgcat cccaaaaaaa aaaaaaaaaa ca
//