LOCUS BX538024 8015 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686C086 (from clone DKFZp686C086);
complete cds.
ACCESSION BX538024
VERSION BX538024.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 8015)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686C086) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..8015
/db_xref="H-InvDB:HIT000054808"
/organism="Homo sapiens"
/map="2q35"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686C086"
/tissue_type="human cervix"
/db_xref="taxon:9606"
CDS 379..3318
/codon_start=1
/gene="DKFZp686C086"
/product="hypothetical protein"
/note="similar to ubiquitin carboxyl-terminal hydrolase"
/db_xref="GOA:Q86T82"
/db_xref="H-InvDB:HIT000054808.15"
/db_xref="HGNC:HGNC:20063"
/db_xref="InterPro:IPR001394"
/db_xref="InterPro:IPR003903"
/db_xref="InterPro:IPR018200"
/db_xref="InterPro:IPR028889"
/db_xref="InterPro:IPR032069"
/db_xref="InterPro:IPR038093"
/db_xref="InterPro:IPR038765"
/db_xref="PDB:3U12"
/db_xref="UniProtKB/Swiss-Prot:Q86T82"
/protein_id="CAD97970.1"
/translation="MSPLKIHGPIRIRSMQTGITKWKEGSFEIVEKENKVSLVVHYNT
GGIPRIFQLSHNIKNVVLRPSGAKQSRLMLTLQDNSFLSIDKVPSKDAEEMRLFLDAV
HQNRLPAAMKPSQGSGSFGAILGSRTSQKETSRQLSYSDNQASAKRGSLETKDDIPFR
KVLGNPGRGSIKTVAGSGIARTIPSLTSTSTPLRSGLLENRTEKRKRMISTGSELNED
YPKENDSSSNNKAMTDPSRKYLTSSREKQLSLKQSEENRTSGLLPLQSSSFYGSRAGS
KEHSSGGTNLDRTNVSSQTPSAKRSLGFLPQPVPLSVKKLRCNQDYTGWNKPRVPLSS
HQQQQLQGFSKLGNTCYMNAILQSLFSLQSFANDLLKQGIPWKKIPLNALIRRFAHLL
VKKDICNSETKKDLLKKVKNAISATAERFSGYMQNDAHEFLSQCLDQLKEDMEKLNKT
WKTEPVSGEENSPDISATRAYTCPVITNLEFEVQHSIICKACGEIIPKREQFNDLSID
LPRRKKPLPPRSIQDSLDLFFRAEELEYSCEKCGGKCALVRHKFNRLPRVLILHLKRY
SFNVALSLNNKIGQQVIIPRYLTLSSHCTENTKPPFTLGWSAHMAISRPLKASQMVNS
CITSPSTPSKKFTFKSKSSLALCLDSDSEDELKRSVALSQRLCEMLGNEQQQEDLEKD
SKLCPIEPDKSELENSGFDRMSEEELLAAVLEISKRDASPSLSHEDDDEPTSSPDTGF
AEDDIQEMPENPDTMETEKPKTITELDPASFTEITKDCDENKENKTPEGSQGEVDWLQ
QYDMEREREEQELQQALAQSLQEQEAWEQKEDDDLKRATELSLQEFNNSFVDALGSDE
DSGNEDVFDMEYTEAEAEELKRNAETGNLPHSYRLISVVSHIGSTSSSDHYISDVYDI
KKQAWFTYNDLEVSKIQEAAVQSDRDRSGYIFFYMHKEIFDELLETEKNSQSLSTEVG
KTTRQAS"
regulatory 7983..7988
/regulatory_class="polyA_signal_sequence"
polyA_site 8004
BASE COUNT 2446 a 1499 c 1625 g 2445 t
ORIGIN
1 catcagccgc tctccctgac taggggtagc tagcggcctc cctcctttgg gttctgtatc
61 cctacttcca ttaccctcgg ctcctcccac tcctcggggg ctccgtgctt tccgcgggtc
121 tgtccggggg ctccggaccc tcggcgcagc tgagttgatg gcttccggag aactggcata
181 gccgcagaat atgagtagtg tcccaagaag agtgctttgc ctttggcaca aggatcagaa
241 taaaggtgaa ttgctattac atagggtttt tcggtaaaag tcactgaaaa ttatttgcca
301 tacagtaacc agagacctcc aactaggggc ccccaaactg tatcctgcct gtagccagaa
361 gcaattttta aagaaaatat gtctcctctg aagatacatg gtcctatcag aattcgaagt
421 atgcagactg ggattacaaa gtggaaagaa ggatcctttg aaattgtaga aaaagagaat
481 aaagtcagcc tagtagttca ctacaatact ggaggaattc caaggatatt tcagctaagt
541 cataacatta aaaatgtggt gcttcgaccc agtggagcga aacaaagccg cctaatgtta
601 actctgcaag ataacagctt cttgtctatt gacaaagtac caagtaagga tgcagaggaa
661 atgaggttgt ttctagatgc agtccatcaa aacagacttc ctgcagccat gaaaccgtct
721 caggggtctg gtagttttgg agccattctg ggcagcagga cctcacagaa ggaaaccagc
781 aggcagcttt cttactcaga caatcaggct tctgcaaaaa gaggaagttt ggaaactaaa
841 gatgatattc catttcgaaa agttcttggt aatccgggta gaggatcgat taagactgta
901 gcaggaagtg gaatagctcg gacgattcct tctttgacat ctacttcaac acctcttaga
961 tcagggttgc tagaaaatcg tactgaaaag aggaaaagaa tgatatcaac tggctcagaa
1021 ttgaatgaag attaccctaa ggaaaatgat tcatcatcga acaacaaggc catgacagat
1081 ccctccagaa agtatttaac cagcagtaga gaaaagcagc tgagtttgaa acagtcagaa
1141 gagaatagga catcagggct tttaccttta cagtcatcat ccttttatgg tagcagagct
1201 ggatccaagg aacactcttc tggtggcact aacttagaca ggactaatgt ttcaagccag
1261 actccctctg ccaaaagaag tttgggattt cttcctcagc cagttcctct ttctgttaaa
1321 aaactgaggt gtaaccagga ttacactggc tggaataaac caagagtgcc cctttcctct
1381 caccaacagc agcaactgca gggcttctcc aagttgggaa atacctgcta tatgaatgct
1441 attctacaat ctctattttc actccagtca tttgcaaatg acttgcttaa acaaggtatc
1501 ccatggaaga aaattccact caatgcactt atcagacgct ttgcacactt gcttgttaaa
1561 aaagatatct gtaattcaga gaccaaaaag gatttactca agaaggttaa aaatgccatt
1621 tcagctacag cagagagatt ctctggttat atgcagaatg atgctcatga atttttaagt
1681 cagtgtttgg accagctgaa agaagatatg gaaaaattaa ataaaacttg gaagactgaa
1741 cctgtttctg gagaagaaaa ttcaccagat atttcagcta ccagagcata cacttgccct
1801 gttattacta atttggagtt tgaggttcag cactccatca tttgtaaagc atgtggggag
1861 attatcccca aaagagaaca gtttaatgac ctctctattg accttcctcg taggaaaaaa
1921 ccactccctc ctcgttcaat tcaagattct cttgatcttt tctttagggc cgaagaactg
1981 gagtattctt gtgagaagtg tggtgggaag tgtgctcttg tcaggcacaa atttaacagg
2041 cttcctaggg tcctcattct ccatttgaaa cgatatagct tcaatgtggc tctctcgctt
2101 aacaataaga ttgggcagca agtcatcatt ccaagatacc tgaccctgtc atctcattgc
2161 actgaaaata caaaaccacc ttttaccctt ggttggagtg cacatatggc aatttctaga
2221 ccattgaaag cctctcaaat ggtgaattcc tgcatcacca gcccttctac accttcaaag
2281 aaattcacct tcaaatccaa gagctccttg gctttatgcc ttgattcaga cagtgaggat
2341 gagctaaaac gttctgtggc cctcagccag agactttgtg aaatgttagg caacgaacag
2401 cagcaggaag acctggaaaa agattcaaaa ttatgcccaa tagagcctga caagtctgaa
2461 ttggaaaact caggatttga cagaatgagc gaagaagagc ttctagcagc tgtcttggag
2521 ataagtaaga gagatgcttc accatctctg agtcatgaag atgatgatga gccaactagc
2581 agcccagata ccggatttgc agaagatgat attcaagaaa tgccagaaaa tccagacact
2641 atggaaactg agaagcccaa aacaatcaca gagctggatc ctgccagttt tactgagata
2701 actaaagact gtgatgagaa taaagaaaac aaaactccag aaggatctca gggagaagtt
2761 gattggctcc agcagtatga tatggagcgt gaaagggaag agcaagagct tcagcaggca
2821 ctggctcaga gccttcaaga gcaagaggct tgggaacaga aagaagatga tgacctcaaa
2881 agagctaccg agttaagtct tcaagagttt aacaactcct ttgtggatgc attgggttct
2941 gatgaggact ctggaaatga ggatgttttt gatatggagt acacagaagc tgaagctgag
3001 gaactgaaaa gaaatgctga gacaggaaat ctgcctcatt cgtaccggct catcagtgtt
3061 gtcagtcaca ttggtagcac ttcttcttca gatcattaca ttagtgatgt atatgacatt
3121 aagaagcaag cgtggtttac ttacaatgac ctggaggtat caaaaatcca agaggctgcc
3181 gtgcagagtg atcgagatcg gagtggctac atcttctttt atatgcacaa ggagatcttt
3241 gatgagctgc tggaaacaga aaagaactct cagtcactta gcacggaagt ggggaagact
3301 acccgtcagg cctcgtgagg aacaaactcc tgggttggca gcatgcactg catatttgtt
3361 actgctgccc acctcacctt tcctctgctg aaggagaatt tggaattcta cttgatgcgg
3421 gagcaacaaa cagctcaggg ccaaaccaaa agacaaaaat tggagtaacg tagaatgctc
3481 catgctattt tatggaaact ttggtctcac atccgtagct gattatcctc tttttctcct
3541 atgagtggca cttcttttgt cttaggaata catgttgtaa atatatatct gtgtatgtgt
3601 gtatacacac acacagacac acacacacac acacgggatg aatggagcct taaagagtta
3661 ggatgagcca ccagaatatg cctgctcaaa attaatagca cagcagtttg gagaagaaat
3721 gaaggtgtca aagagtccat tcacctgaga aatgtgtgaa gacatactta tcagttggct
3781 tttagctttt atgttccttg agtagtttca ctcaagtctg taaccttttg tgttccttat
3841 tagtaaaatt cactggaaag ccagctcttc atgttacact aatgacagtt tgttctcttt
3901 gcaagagagg ggcattactg tcacctgact tgaggagctg ttttgttgtt gttgttgtct
3961 gcaaatttca tgaatttgtg atgtctttgc tgtttacatg cagtcccaag aaatggattg
4021 ttggtgcttt ggaatatgtt acagtcccac atttgatatt tcttatatac tttgttttct
4081 ctaaggagat ttcttcacac agtatgttca tcatatatca tcatcattat tatggtggta
4141 aagatagaat cttttttctt ttttgtcatt ctgccatgga gcagcattac cctaatggat
4201 tgcaaccaaa actttaaaca agtagaaaga taatatttct ccaattggga ctccccagca
4261 ggaatactta gggataagga agaatgctag catctctgtc tctcaaacat agggaggata
4321 agaagagtgt tcttctggta aagctaaaat tctggaccac tgaagctaaa agccctattg
4381 caagtatgaa attaagtact tgagctatag gacaaacctt gggcatttaa ccatttactg
4441 tctggctttg cccttaaaat agggttgcaa ttaaaatgtg attggcttag gtaatcccaa
4501 aaactaacaa ataacaaagg tgcataattt atttatctac tttttaggtg ctctgagttg
4561 aggcaaagta gagcggcaac attaagtgct atgctagtca cttagctgac gtaaccagct
4621 tggttaagca gcttatgaaa ccatataaag aattcttttg aggatggaat tctgtccaca
4681 aaataatttt gtgagcccag atatcattag gatcacacag agttaaatat agaaaaatga
4741 aaccatcatt atattctttc gtgttttttc ttttattata aacaagggga ttattcttta
4801 gttctcagag gtagggacaa aaccacatca ggttttcaga aggaaaaaac atttaaaaac
4861 ccaccatcac atgagagaat cacttgaacc caggaggcag aggttgcagt gagctgagat
4921 cgcatcattg cactgcagtc tgagtgacag agtgagactc catctcatta aaaaaaacga
4981 aaacaaaaac aaaaaaaaca caaaccatca tcacagaaga tgcaacatct tttctgaaag
5041 attgccttaa gagagctcca gtcctactct tggaacttgg atgtattcta atgtagtaaa
5101 ctattctaag ttttcattct ttgaattata aatggcctca gcagttttgc tcaactactg
5161 ataaatgctt tgcctcctac catctaccta tataccttat tgtaatgaat gttccaaaat
5221 ggtagagtgg tagaaaacgc cagagtagtt tagagcagag gaaaatattt gttttaaaac
5281 tagctttaaa gttttgtttc atttctacca ggagcctctt tggtttggtt tgattttgct
5341 tggaaataat tggttttctt ataaatgagt gaagcggtga taaaattctt tggctagtta
5401 ttaattcttt tacgtgtctt tgcatttgag aggcactgtt aaaaattatt gggaaagatt
5461 taaagtgcag gctgcaatta aaacatggag aaaagtagaa ataatgccat aagtctagat
5521 tgcctcatga agcagcctca tttgaattgc tttcatagct ttcatgtgtg tatggtttag
5581 aagtacactt acctcagaaa cctgatttga tcttcatgtc ttgggcagga gttgttgaaa
5641 ataggttatt ggaatatata agttatctca ctgctcatgt acttgcatgt ttgggactca
5701 aattttactt gatgtctgtc cattcttgtg gccctatcag ccttctcctt cctttactcc
5761 tttaatctac ttctttgact accagtggag atttcagctg gactatgttg atggggtttg
5821 ttgttgtttt tgagctggct gtatatattt taaaattata aatagataat atattatttt
5881 ttgcacattg tgatcagttt gcccagaatt ggggatgggg cagttagcat gttggggcca
5941 ggaagggaca agttagataa ggactgagtg cttccgttgc aggcagtttg cacaatacct
6001 aattaacctt cctattgaaa ataccaaatg tgtggttaca ttactttaaa tgacattgaa
6061 ttggaacttg atggcaatta gttctagata caaccttttg atctttgttg gaattttaag
6121 ggaaaaatga actaaacttc atatttgttg attttaatca cctaatagta ctgaaggttg
6181 gaaagttgca tgtggctgga tgctgttaat ttctttaata gccatgacta taatttaagc
6241 ctatgagaag atagactgtt tcgtagggat atatttacat gtgtgtgcac actcatgagt
6301 tttgtctcag caggatagaa taagcaaatc catgaactgg tcttctatta atactttgat
6361 tctaaaaatt atttgtttac ttgctatggt ctgttcattc tgggcctaac cctaaaggct
6421 caataacaaa tacaacaaat gtaaatatgt ttacatttta agacatatgc agtggttctt
6481 acagatcagt taattaactc cagaaagcaa atgttagact acacatttat ttttctcctt
6541 gatcaagtgt aaaattctga aacagaggct ttaaaattta aaacctcagc aaaataatcc
6601 atgaatttac tgattcttct gtatcgtgtg tagttaccat tatgtaacta tacacacata
6661 cagctatgga tatagttgta taatgaaaat tatctgcaaa cacctaaatt aaagagaaaa
6721 aaaagtagtt tgtaaactca tttgtgatct actgaaaaga ggttatatta aagcaaatta
6781 aaatattttc cttctctgtc ctctgaaatg actgcagtag atactcttag ttatcccatt
6841 tagggtggtt ggagggcctt tttaatttaa ttgacccccc gaggtggtct tttgttttaa
6901 acagggggca acagctggat ctccaagtac atatggattt tgtatatata ggagattttt
6961 agaaaaatca acaacctaac accagattca agtcacataa aagtgttcca ataaaatgga
7021 tggatgtctt tttcctcccc attttgcttt atactgagta atgcactctt gcaagtgtat
7081 acaaaaacta aatagacttc tgccctccaa catcttttta ttgcattact tcaaaatcct
7141 aattttgtct ctactgatat gtcttattaa catctgaaaa aatatatatt ttttattgga
7201 aaattctaat ttgttaggcc ttgaaagttt tgtgacaatt attttgctgt gtttaaccac
7261 aatcattcac cttatggcat gctttgatta ctagacttca ggcagtctca ttcattgtat
7321 catacttaca cacaattagt aagttgtctc catgtgtgct atatgtctga ggtgtatgga
7381 gtttttattt aaaaagtgtg ccagtctgaa tataagcatt tgattttgta acattggact
7441 tttcttaaaa gtacagaggt tcaaagtata ggtatgtcca ttggcataag aatagagtgg
7501 gtgagggtct ggaccaggtt ccaggttggt ccagtcagat gccagaacaa agaagaacag
7561 tcaactaaac tggtctactt caaaaatagt gggcctgtgt gaagaatgag accacatgtg
7621 ggtgtgcaca cctcttgtcc ccaggtttcc ctccctttga gcttttcttt ccctccctaa
7681 cttctctggc ctattgtcat tgttgtttct ttaaacttaa ggagagaaaa acaaaaatga
7741 gattcctaca ctttgcctaa ttgagccact accaggtttt ctggcagctg tggccacatt
7801 atttgtgaga tgattttttt tctttatgtt cagagtgact tttgattctg attctttatg
7861 ttttgtatgg agcggcactt ttatctgtgt tttagcagaa ctgttcctct gtatccttta
7921 cggtttttct ttgtttttgt ttccttttta aattatgcat agagtttttt tgtgtgtatg
7981 aaattaaagc ctttattaac cttcaaaaaa aaaaa
//