LOCUS BX538014 5582 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686B1946 (from clone DKFZp686B1946).
ACCESSION BX538014
VERSION BX538014.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5582)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686B1946) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..5582
/db_xref="H-InvDB:HIT000054798"
/organism="Homo sapiens"
/map="1p31.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686B1946"
/tissue_type="human amygdala"
/db_xref="taxon:9606"
CDS <1..1069
/codon_start=2
/gene="DKFZp686B1946"
/product="hypothetical protein"
/note="hypothetical protein"
/db_xref="GOA:Q7Z3B1"
/db_xref="H-InvDB:HIT000054798.16"
/db_xref="HGNC:HGNC:17302"
/db_xref="InterPro:IPR003598"
/db_xref="InterPro:IPR003599"
/db_xref="InterPro:IPR007110"
/db_xref="InterPro:IPR013098"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036179"
/db_xref="PDB:6DLD"
/db_xref="UniProtKB/Swiss-Prot:Q7Z3B1"
/protein_id="CAD97961.1"
/translation="GMDMMLLVQGACCSNQWLAAVLLSLCCLLPSCLPAGQSVDFPWA
AVDNMMVRKGDTAVLRCYLEDGASKGAWLNRSSIIFAGGDKWSVDPRVSISTLNKRDY
SLQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVPPKIYDISNDMTVNEGTNVTLT
CLATGKPEPSISWRHISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVSFPDVRKV
KVVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQN
FSTRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCW
YLVLTLSSFTSIFYLKNAILQ"
regulatory 5553..5558
/regulatory_class="polyA_signal_sequence"
polyA_site 5572
BASE COUNT 1874 a 934 c 1009 g 1765 t
ORIGIN
1 agggatggac atgatgctgt tggtgcaggg tgcttgttgc tcgaaccagt ggctggcggc
61 ggtgctcctc agcctgtgct gcctgctacc ctcctgcctc ccggctggac agagtgtgga
121 cttcccctgg gcggccgtgg acaacatgat ggtcagaaaa ggggacacgg cggtgcttag
181 gtgttatttg gaagatggag cttcaaaggg tgcctggctg aaccggtcaa gtattatttt
241 tgcgggaggt gataagtggt cagtggatcc tcgagtttca atttcaacat tgaataaaag
301 ggactacagc ctccagatac agaatgtaga tgtgacagat gatggcccat acacgtgttc
361 tgttcagact caacatacac ccagaacaat gcaggtgcat ctaactgtgc aagttcctcc
421 taagatatat gacatctcaa atgatatgac cgtcaatgaa ggaaccaacg tcactcttac
481 ttgtttggcc actgggaaac cagagccttc catttcttgg cgacacatct ccccatcagc
541 aaaaccattt gaaaatggac aatatttgga catttatgga attacaaggg accaggctgg
601 ggaatatgaa tgcagtgcgg aaaatgatgt gtcattccca gatgtgagga aagtaaaagt
661 tgttgtcaac tttgctccta ctattcagga aattaaatct ggcaccgtga cccccggacg
721 cagtggcctg ataagatgtg aaggtgcagg tgtgccgcct ccagcctttg aatggtacaa
781 aggagagaag aagctcttca atggccaaca aggaattatt attcaaaatt ttagcacaag
841 atccattctc actgttacca acgtgacaca ggagcacttc ggcaattata cttgtgtggc
901 tgccaacaag ctaggcacaa ccaatgcgag cctgcctctt aaccctccaa gtacagccca
961 gtatggaatt accgggagcg ctgatgttct tttctcctgc tggtaccttg tgttgacact
1021 gtcctctttc accagcatat tctacctgaa gaatgccatt ctacaataaa ttcaaagacc
1081 cataagaggc ttttaaggat tctctgaaag tgctgatggc tggatccaat ctggtacagt
1141 ttgttaaaag cagcgtggga tataatcagc agtgcttaca tggggatgat cgccttctgt
1201 agaattgctc attatgtaaa tactttaatt ctactctttt ttgattagct acattacctt
1261 gtgaagcagt acacattgtc ctttttttaa gacgtgaaag ctctgaaatt acttttagag
1321 gatattaatt gtgatttcat gtttgtaatc tacaactttt caaaagcatt cagtcatggt
1381 ctgctaggtt gcaggctgta gtttacaaaa acgaatattg cagtgaatat gtgattcttt
1441 aaggctgcaa tacaagcatt cagttccctg tttcaataag agtcaatcca catttacaaa
1501 gatgcatttt tttctttttt gataaaaaag caaataatat tgccttcaga ttatttcttc
1561 aaaatataac acatatctag atttttctgc tcgcatgata ttcaggtttc aggaatgggc
1621 cttgtaatat aactggctgt gcagctctgc ctctctttcc tgtaagttca gcatgggtgt
1681 gccttcatac aataatattt ttctctttgt ctccaactaa tataaaatgt tttgctaaat
1741 cttacaattt gaaagtaaaa ataaaccaga gtgatcaagt taaaccatac actatctcta
1801 agtaacgaag gagctattgg actgtaaaaa tctcttcctg cactgacgat ggggtttgag
1861 aattttgccc cacactaact cagttcttgt gatgagagac aatttaataa cagtatagta
1921 aatataccat atgatttctt tagttgtagc taaatgttag atccaccgtg ggaaatcatt
1981 ccctttaaaa tgacagcaca gtccactcaa aggattgcct agcaatacag catcttttcc
2041 tttcactagt ccaagccaaa aattttaaga tgatttgtca gaaagggcac aaagtcctat
2101 cacctaatat tacaagagtt ggtaagcgct catcattaat tttattttgt ggcagctaag
2161 ttagtatgac agaggcagtg ctcctgtgga caggagcatt ttgcatattt tccatctgaa
2221 agtatcactc agttgatagt ctggaatgca tgttatatat tttaaaactt ccaaaatata
2281 ttataacaaa cattctatat cggtatgtag cagaccaatc tctaaaatag ctaattcttc
2341 aataaaatct ttctatatag ccatttcagt gcaaacaagt aaaatcaaaa aagaccatcc
2401 tttatttttc cttacatgat atatgtaaga tgcgatcaaa taaagacaaa acaccagtga
2461 tgagaatatc ttaagataag taattatcaa attattgtga atgttaaatt atttctacta
2521 taaagaagca aaactacatt tttgaaggaa aatgctgtta ctctaacatt aatttacagg
2581 aatagtttga tggtttcact ctttactaaa gaaaggccat caccttgaaa gccattttac
2641 aggtttgatg aagttaccaa tttcagtaca cctaaatttc tacaaatagt ccccttttac
2701 aagttgtaac aacaaagacc ctataataaa attagataca agaaattttg cagtggttat
2761 acatatttga gatatctagt atgttgccct agcagggatg gcttaaaaac tgtgatcttt
2821 tttcttcaag taaaacttag tcccaaagta catcataaat caattttaat tagaaaaatg
2881 aatcttaaat gaggggacat aagtatactc tttccacaaa atggcaataa taaggcataa
2941 agctagtaaa tctactaact gtaataaatg tatgacatta ttttgattga tacattaaaa
3001 aagagttttt agaacaaata tggcatttaa ctttattatt tatttgcttt taagaaatat
3061 tctttgtgga attgttgaat aaactataaa atactatttt gtattgcagc tttaaagtgg
3121 cacactccat aataatctac ttactagaaa tagtggtgct accacaaaaa aatgttaacc
3181 atcagtacca ttgtttggga gaaagaaaca gatcaagaat gcatattatt cagtgaccgc
3241 tttcctagag ttaaaatacc tcctctttgt aaggtttgta ggtaaattga ggtataaact
3301 atggatgaac caaataatta gttcaaagtg ttgtcatgat tccaaatttg tggagtctgg
3361 tgtttttacc atagaatgtg acagaagtac agtcatagct cagtagctat atgtatttgc
3421 ctttatgtta gaagagactt tcttgagtga catttttaaa tagaggaggt attcactatg
3481 tttttctgta tcacagcagc attcctagtc cttaggccct cggacagagt gaaatcatga
3541 gtatttatga gttcaatatt gtcaaataag gctacagtat ttgctttttt gtgtgaatgt
3601 attgcatata atgttcaagt agatgatttt acatttatgg acatataaaa tgtctgatta
3661 ccccatttta tcagtcctga ctgtacaaga ttgttgcaat ttcagaatag cagttttata
3721 aattgattta tcttttaatc tataacaatt tgtgttagct gttcatttca ggattatatt
3781 ttctacaagt tccacttgtg ggactccttt tgttgcccct attttttttt aaagaaggaa
3841 gaaagaaaaa taagtagcag tttaaaaatg agaatggaga gaaaagaaaa agaatgaaaa
3901 ggaaaggcag taaagaggga aaaaaaagga aggatggaag gaatgaagga aggaagggag
3961 gaaggggaga aggtaggaag aaagaaagga tgagagggaa ggaagaatca gagtattagg
4021 gtagttaact tacacatttg cattcttagt ttaactgcaa gtggtgtaac tatgtttttc
4081 aatgatcgca tttgaaacat aagtcctatt ataccattaa gttcctatta tgcagcaatt
4141 atataataaa aagtactgcc caagttatag taatgtgggt gtttttgaga cactaaaaga
4201 tttgagaggg agaatttcaa acttaaagcc acttttgggg ggtttataac ttaactgaaa
4261 aattaatgct tcatcataac atttaagcta tatctagaaa gtagactgga gaactgagaa
4321 aattacccag gtaattcagg gaaaaaaaaa atatatatat atataaatac ccctacattt
4381 gaagtcagaa aactctgaaa aactgaatta tcaaagtcaa tcatctataa tgatcaaatt
4441 tactgaacaa ttgttaattt atccattgtg cttagctttg tgacacagcc aaaagttacc
4501 tatttaatct tttcaataaa aattgttttt tgaaatccag aaatgattta aaaagaggtc
4561 aggtttttaa ctatttattg aagtatgtgg atgtacagta tttcaataga tatgaatatg
4621 aataaatggt atgtcttaag attctttgaa tatgtattta ctttaaagac tggaaaaagc
4681 tcttcctgtc ttttagtaaa acatccatat ttcataacct gatgtaaaat atgttgtact
4741 gtttccaata ggtgaatata aactcagttt atcaattaaa atatgtattt gactcatttt
4801 aaaactctat tagcttaaga gaaagaagga agaaataata atttgaagat atttctgcta
4861 ttctctttat ttcctgtatt acactcatct ttctgcttac tctaaagcag tacagggtaa
4921 aaattctaga tgctacagtt tcaaatgact ccacactata ttctttcttg ctgttgctga
4981 ttcctaaagg gtttgatgag ctgaactaca tctaaactaa aaataaattt tctggaaaca
5041 ttttattatt aattatttag aacctttacc tggtaaaata cagcagagtt agcaacagag
5101 actaaatatc ctgttgataa aatcctgatg atcttacagg ctaaacaact gaaaactcaa
5161 acgcttgtaa gagccaggca gagtgtaatt tcttaacagc tgggtataaa acaacgggca
5221 cctgaaggta ttcagataca atttccttaa aaataccttg gtttccaagc aaaacacgtt
5281 atttggctga gaacctttag tttgtaaata ccaaaccata atatacaaat gagatctcaa
5341 gccaaatgaa ttttttaagc cctctttccc atatctgttc atctatgata gtcaactgaa
5401 taaatgagaa caatgtgata gataaaacaa caaagcataa aaaagattca tgcttggttt
5461 tataagctat tttgaaatat aagtatcatt gctattctga gaaatctata tacaccaaag
5521 ccctccctcc acaaaaaaac tggaaatgtt ctaataaatg tctgatttcc ccaaaaaaaa
5581 aa
//