LOCUS BX537986 5041 bp mRNA linear HTC 16-OCT-2008 DEFINITION Homo sapiens mRNA; cDNA DKFZp686J0330 (from clone DKFZp686J0330). ACCESSION BX537986 VERSION BX537986.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5041) AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R., Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M., Wiemann S. CONSRTM The German cDNA Consortium JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter Landstr.1, D-85764 Neuherberg, GERMANY COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de; sequenced by DKFZ (German Cancer Research Center, Heidelberg/Germany) within the cDNA sequencing consortium of the German Genome Project. This clone (DKFZp686J0330) is available at the RZPD Deutsches Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany. Please contact RZPD for ordering: http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp686J0330 Further information about the clone and the sequencing project is available at http://mips.gsf.de/projects/cdna/ FEATURES Location/Qualifiers source 1..5041 /db_xref="H-InvDB:HIT000054770" /organism="Homo sapiens" /mol_type="mRNA" /dev_stage="adult" /clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host DH10B; sites SfiIA + SfiIB" /clone="DKFZp686J0330" /tissue_type="testis" /note="nucleoporin 214kDa, alternative start, differentially spliced" /db_xref="taxon:9606" CDS 248..4807 /codon_start=1 /gene="DKFZp686J0330" /product="hypothetical protein" /db_xref="H-InvDB:HIT000054770.14" /db_xref="InterPro:IPR026054" /db_xref="InterPro:IPR041553" /db_xref="UniProtKB/TrEMBL:Q7Z3C4" /protein_id="CAD97946.1" /translation="MKSSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSA SKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPA AKPGSPQAKSLQPAVAEKQGHQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQV GTSEEMKMLRTESDDLHTFLLEIKETTESLHGDISSLKTTLLEGFAGVEEAREQNERN RDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDQHLEQKKKQR HLLVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYKQTSLWSLSSAVPSQSS IHSFDSDLESLCNALLKTTIESHTKSLPKVPAKLSPMKQAQLRNFLAKRKTPPVRSTA PASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRT PSIQPSLLPHAAPFAKSHLAHGSSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGA PSPSHPISAPQAAAAAALRRQMASQAPAVNTLTESTLKNVPQVVNVQELKNNPATPST AMGSSVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAK IETAVTSTPSASGQFSKPFSFSPSGTGFNFGIITPTPSSNFTAAQGATPSTKESSQPD AFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSSKLE TPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVP SGFNFTAPPVLGKHTEPPVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISF GGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSL PMSAGRSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVL AQPAVSNSGTAASSTSLVALSAEATPATTGVPDARTEAVPPASSFSVPGQTAVTAAAI SSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQ LTNNTATAPSATPVFGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTA PGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASSTPTSTSGSVFGAA SSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSG FSFCQASGFGSGNTGSVFGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGG KPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSS GGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGST GGKVFGEGTAAASAGGFGFGSSGNTTSFGTLASQNAPTFGSLSQQTSGFGTQSSGFSG FGSGTGGFSFGSNNSSVQGFGGWRS" BASE COUNT 1215 a 1473 c 1187 g 1166 t ORIGIN 1 ggtgccaggc actgtggtag tcatcgcggc agccctacga agtagtcgtt aacgtagagg 61 agtaagttga ggctcggaaa gtaatttccc taaagtcaca tttgacgcgg ggctgaaagc 121 cagcatcatt taagaccttt gctctcctgt ggctccatca gctgcttcat tctcctttgg 181 atcatctggt tttaagccta ccctggaaag cacaccagtg ccaagtgtgt ctgctccaaa 241 tatagcaatg aagtcctcct tcccaccctc aacctctgct gtcaaagtca accttagtga 301 aaagtttact gctgcagcta cctctactcc tgttagtagc tcccagagcg cacccccgat 361 gtcgccattc tcttctgcct ccaagccagc tgcttctgga ccactcagcc accccacacc 421 tctctcagca ccacctagtt ccgtgccatt gaagtcctca gtcttgccct caccatcagg 481 acgatctgct cagggcagtt caagcccagt gccctcaatg gtacagaaat cacccaggat 541 aacccctcca gcggcaaagc caggctctcc ccaggcaaag tcacttcagc ctgctgttgc 601 agaaaagcag ggacatcagt ggaaagattc agatcctgta atggctggaa ttggggagga 661 gattgcacac tttcagaagg agttggaaga gttaaaagcc cgaacttcca aagcctgttt 721 ccaagtgggc acttctgagg agatgaagat gctgcgaaca gaatcagatg acttgcatac 781 ctttcttttg gagattaaag agaccacaga gtcgcttcat ggagatataa gtagcctgaa 841 aacaacttta cttgagggct ttgctggtgt tgaggaagcc agagaacaaa atgaaagaaa 901 tcgtgactct ggttatctgc atttgcttta taaaagacca ctggatccca agagtgaagc 961 tcagcttcag gaaattcggc gccttcatca gtatgtgaaa tttgctgtcc aagatgtgaa 1021 tgatgttcta gacttggagt gggatcagca tctggaacaa aagaaaaaac aaaggcacct 1081 gcttgtgcca gagcgagaga cactgtttaa caccctagcc aacaatcggg aaatcatcaa 1141 ccaacagagg aagaggctga atcacctggt ggatagtctt cagcagctcc gcctttacaa 1201 acagacttcc ctgtggagcc tgtcctcggc tgttccttcc cagagcagca ttcacagttt 1261 tgacagtgac ctggaaagcc tgtgcaatgc tttgttgaaa accaccatag aatctcacac 1321 caaatccttg cccaaagtac cagccaaact gtcccccatg aaacaggcac aactgagaaa 1381 cttcttggcc aagaggaaga ccccaccagt gagatccact gctccagcca gcctgtctcg 1441 atcagccttt ctgtctcaga gatattatga agacttggat gaagtcagct caacgtcatc 1501 tgtctcccag tctctggaga gtgaagatgc acggacgtcc tgtaaagatg acgaggcagt 1561 ggttcaggcc cctcggcacg cccccgtggt tcgcactcct tccatccagc ccagtctctt 1621 gccccatgca gcaccttttg ctaaatctca cctggctcat ggttcttcac ctggtgtgat 1681 gggaacttca gtggctacat ctgctagcaa aattattcct caaggggccg atagcacaat 1741 gcttgccacg aaaaccgtga aacatggtgc acctagtcct tcccacccca tctcagcccc 1801 gcaggcagct gccgcagcag cactcaggcg gcagatggcc agtcaggcac cagctgtaaa 1861 cactttgact gaatcaacgt tgaagaatgt ccctcaagtg gtaaatgtgc aggaattgaa 1921 gaataaccct gcaacccctt ctacagccat gggttcttca gtgccctact ccacagccaa 1981 aacacctcac ccagtgttga ccccagtggc tgctaaccaa gccaagcagg ggtctctaat 2041 aaattccctt aagccatctg ggcctacacc agcatccggt cagttatcat ctggtgacaa 2101 agcttcaggg acagccaaga tagaaacagc tgtgacttca accccatctg cttctgggca 2161 gttcagcaag cctttctcat tttctccatc agggactggc tttaattttg ggataatcac 2221 accaacaccg tcttctaatt tcactgctgc acaaggggca acaccctcca ctaaagagtc 2281 aagccagccg gacgcattct catctggtgg gggaagcaaa ccttcttatg aggccattcc 2341 tgaaagctca cctccctcag gaatcacatc cgcatcaaac accaccccag gagaacctgc 2401 cgcgtctagc agcagacctg tggcaccttc tggaactgct ctttccacca cctctagtaa 2461 gctggaaacc ccaccgtcca agctgggaga gcttctgttt ccaagttctt tggctggaga 2521 gactctggga agtttttcag gactgcgggt tggccaagca gatgattcta caaaaccaac 2581 caataaggct tcatccacaa gcctaactag tacccagcca accaagacgt caggcgtgcc 2641 ctcagggttt aattttactg cccccccggt gttagggaag cacacggagc cccctgtgac 2701 atcctctgca accaccacct cagtagcacc accagcagcc accagcactt cctcaactgc 2761 cgtttttggc agtctgccag tcaccagtgc aggatcctct ggggtcatca gttttggtgg 2821 gacatctcta agtgctggca agactagttt ttcatttgga agccaacaga ccaatagcac 2881 agtgccccca tctgccccac caccaactac agctgccact ccccttccaa catcattccc 2941 cacattgtca tttggtagcc tcctgagttc agcaactacc ccctccctgc ctatgtccgc 3001 tggcagaagc acagaagagg ccacttcatc agctttgcct gagaagccag gtgacagtga 3061 ggtctcagca tcagcagcct cacttctaga ggagcaacag tcagcccagc ttccccaggc 3121 tcctccgcaa acttctgact ctgttaaaaa agaacctgtt cttgcccagc ctgcagtcag 3181 caactctggc actgcagcat ctagtactag tcttgtagca ctttctgcag aggctacccc 3241 agccaccacg ggggtccctg atgccaggac ggaggcagta ccacctgctt cctccttttc 3301 tgtgcctggg cagactgctg tcacagcagc tgctatctca agtgcaggcc ctgtggccgt 3361 cgaaacatca agtaccccca tagcctccag caccacgtcc attgttgctc ccggcccatc 3421 tgcagaggca gcagcatttg gtaccgtcac ttctggctca tccgtctttg ctcagcctcc 3481 tgctgccagt tctagctcag ctttcaacca gctcaccaac aacacagcca ctgccccctc 3541 tgccacgccc gtgtttgggc aagtggcagc cagcaccgca ccaagtctgt ttgggcagca 3601 gactggtagc acagccagca cagcagctgc cacaccacag gtcagcagct cagggtttag 3661 cagcccagct tttggtacca cagccccagg ggtctttgga cagacaacct tcgggcaggc 3721 ctcagtcttt gggcagtcgg cgagcagtgc tgcaagtgtc ttttccttca gtcagcctgg 3781 gttcagttcc gtgcctgcct tcggtcagcc tgcttcctcc actcccacat ccaccagtgg 3841 aagtgtcttt ggtgccgcct caagtaccag tagctccagt tccttctcat ttggacagtc 3901 ttctcccaac acaggagggg ggctgtttgg ccaaagcaac gctcctgctt ttgggcagag 3961 tcctggcttt ggacagggag gctctgtctt tggtggtacc tcagctgcca ccacaacagc 4021 agcaacctct gggttcagct tttgccaagc ttcgggtttt gggtctggta atactggttc 4081 tgtgtttggt caagcagcca gtactggtgg aatagtcttt ggccagcaat catcctcttc 4141 cagtggtagc gtgtttgggt ctggaaacac tggaagaggg ggaggtttct tcagtggcct 4201 tggaggaaaa cccagtcagg atgcagccaa caaaaaccca ttcagctcgg ccagtggggg 4261 ctttggatcc acagctacct caaatacctc taacctattt ggaaacagtg gggccaagac 4321 atttggtgga tttgccagct cgtcgtttgg agagcagaaa cccactggca ctttcagctc 4381 tggaggagga agtgtggcat cccaaggctt tgggttttcc tctccaaaca aaacaggtgg 4441 cttcggtgct gctccagtgt ttggcagccc tcctactttt gggggatccc ctgggtttgg 4501 aggggtgcca gcattcggtt cagccccagc ctttacaagc cctctgggct cgacgggagg 4561 caaagtgttc ggagagggca ctgcagctgc cagcgcagga ggattcgggt ttgggagcag 4621 cggcaacacc acatccttcg gcacgctcgc gagtcagaat gcccccactt tcggatcact 4681 gtcccaacag acttctggtt ttgggaccca gagtagcgga ttctctggtt ttggatcagg 4741 cacaggaggg ttcagctttg ggtcaaataa ctcgtctgtc cagggttttg gtggctggcg 4801 aagctgaggg cgtgtcagca ggcctttcga tccctgggac caaccgcatc ctcagcttct 4861 tccccgagaa atgctggagc aggctgttca gaccgacgtt gccatcaaaa cacatacacc 4921 cagaaagaaa caacagaaac caaaactcac aaggcgcatg attacttgtt ttatatttca 4981 tgttgggttt tccctcccac tattaaacag tctgtttccg taaaaaaaaa aaaaaaaaaa 5041 a //