LOCUS BX537985 4592 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686D0630 (from clone DKFZp686D0630).
ACCESSION BX537985
VERSION BX537985.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4592)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686D0630) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4592
/db_xref="H-InvDB:HIT000054769"
/organism="Homo sapiens"
/map="2p16.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686D0630"
/tissue_type="human testis"
/db_xref="taxon:9606"
CDS <1..3609
/codon_start=1
/gene="DKFZp686D0630"
/product="hypothetical protein"
/note="hypothetical protein, N-terminus elongated,
C-terminus truncated, not fully spliced, differentially
spliced"
/db_xref="GOA:Q3V6T2"
/db_xref="H-InvDB:HIT000054769.15"
/db_xref="HGNC:HGNC:25523"
/db_xref="InterPro:IPR001715"
/db_xref="InterPro:IPR008636"
/db_xref="InterPro:IPR027717"
/db_xref="InterPro:IPR036872"
/db_xref="UniProtKB/Swiss-Prot:Q3V6T2"
/protein_id="CAD97945.1"
/translation="QLEKDKKQLEKENKRLRQQAEIKDTTLEENNVKIGNLEKENKTL
SKEIGIYKESCVRLKELEKENKELVKRATIDIKTLVTLREDLVSEKLKTQQMNNDLEK
LTHELEKIGLNKERLLHDEQSTDDSRYKLLESKLESTLKKSLEIKEEKIAALEARLEE
STNYNQQLRQELKTVKKNYEALKQRQDEERMVQSSPPISGEDNKWERESQETTRELLK
VKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQTQILALQRQTVSLQEQNTTLQ
TQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENESVIKEREDLKSLYDSLIKD
HEKLELLHERQASEYESLISKHGTLKSAHKNLEVEHRDLEDRYNQLLKQKGQLEDLEK
MLKVEQEKMLLENKNHETVAAEYKKLCGENDRLNHTYSQLLKETEVLQTDHKNLKSLL
NNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLEEENRHLLDQIQT
LMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKFYDPSPPRR
RGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQDSSSVGSNS
LEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMVLAGQWTG
STENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSAGFRSKQLVNNKDTTSFEDI
SPQGVSDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNNQSRPQSHSS
GEFSLLHDHEAWSSSGSSPIQYLKRQTRSSPVLQHKIPETLESRHHKIKTGSPGSEVV
TLQQFLEESNKLTSVQIKSSSQENLLDEVMKSLSVSSDFLGKDKPVSCGLARSVSGKT
PGDFYDRRTTKPEFLRPGPRKTEDTYFISSAGKPTPGTQGKIKLVKESSLSRQSKDSN
PYATLPRASSVISTAEGTTRRTSIHDFLTKDSRLPISVDSPPAAADSNTTAASSEYHL
HQWSSHILDIPTHTIGSCAQNDLAIDMPEPLYAQARNSRTGRSHFLNQTFATIRMPSD
AFGMLAKDSIGPFTVAHSSQPFLSLNTELVSNISGLPPRPVIRITDQASASLDKPAQK
ENEQFSDHQNPSNSNLQFSINSNNLVTSACLYPDDTEAALLVSEDNQTVWYEYGCI"
regulatory 4482..4487
/regulatory_class="polyA_signal_sequence"
polyA_site 4500
BASE COUNT 1705 a 860 c 821 g 1206 t
ORIGIN
1 caactggaaa aggataagaa acaattggag aaggaaaata agagactccg acaacaagca
61 gaaattaaag ataccacatt agaagaaaat aatgtgaaga ttggaaattt ggaaaaagaa
121 aacaaaaccc tatccaaaga aattggtata tataaagaat cttgtgtccg tctgaaagaa
181 ctagaaaaag aaaataagga gcttgtgaaa agagcaacta ttgatataaa aacgttggtt
241 acactacgtg aggatttggt gagtgaaaag ttgaagaccc aacagatgaa caatgatctc
301 gaaaaattaa ctcatgagct tgagaagata gggttaaata aggagcgact cttacatgat
361 gaacaaagta ctgatgacag taggtataaa cttttggaat caaaattaga atccactctt
421 aagaagtctc ttgaaataaa agaagaaaaa attgctgctt tagaagctcg attagaagaa
481 tccacgaatt ataaccagca attgcgccaa gaacttaaaa cagtgaaaaa aaattatgaa
541 gctctcaaac agagacaaga tgaggaaagg atggtacaga gctctcctcc aatatctggt
601 gaagacaaca aatgggagcg agaaagtcaa gaaacgacta gagaacttct gaaagttaaa
661 gacagattaa ttgaagtaga aagaaataat gctacactgc aagcagagaa gcaagcgttg
721 aaaactcaac tgaagcaact tgagacacag aacaataatt tgcagactca gattcttgca
781 cttcagaggc agacagtgtc attacaagaa cagaatacca ctcttcaaac acagaatgcc
841 aagcttcagg ttgaaaattc cacccttaat tcccaaagta cctcactcat gaaccagaat
901 gcccaactcc taatccagca gtcttcctta gaaaatgaaa atgaatctgt aatcaaagag
961 cgagaagacc taaaatctct ctatgattct ctgatcaaag atcatgaaaa gctggaactt
1021 cttcatgaac gtcaggcttc agagtatgaa tctcttatct ctaaacatgg aactctgaag
1081 tctgcccaca aaaatcttga ggtggaacat agagaccttg aagaccgtta caatcagtta
1141 ttaaaacaga aaggacagtt ggaagatttg gaaaaaatgc tcaaagtaga acaggaaaaa
1201 atgctgcttg aaaataaaaa tcatgaaaca gtagctgcag aatacaagaa actttgtggt
1261 gaaaatgata ggctgaatca tacctatagt caacttttaa aagagactga agttttacaa
1321 actgaccata aaaatttgaa aagtcttctg aataattcca aactggaaca aacaagatta
1381 gaagctgaat tttcaaaact aaaggaacaa taccaacaat tggatattac atcaaccaag
1441 ctgaataacc agtgtgagtt gctaagccaa cttaaaggaa atttagaaga agaaaatcgg
1501 catctactag atcaaattca gacattaatg ctacagaaca gaacactttt ggagcagaat
1561 atggaaagca aggatctttt tcatgttgaa caaagacagt acattgataa gttaaatgaa
1621 ttaagacgtc agaaggagaa actagaagag aaaattatgg atcaatacaa attttatgac
1681 ccatctcctc ctagaaggag aggcaactgg attactctaa aaatgagaaa attgataaag
1741 tctaagaaag atattaatcg ggaacgccag aaatctctaa cattaacacc cacccgctca
1801 gactccagtg aaggatttct tcagctccct catcaagaca gtcaagatag ttcttcagta
1861 ggttcaaact ctttagaaga tggccaaacc ttggggacca agaaaagcag catggttgca
1921 ctgaaaagac tgcccttttt gaggaacaga ccgaaggata aagacaaaat gaaggcctgc
1981 taccgtcgtt ccatgtccat gaatgacctg gtgcagtcca tggtcctagc aggacagtgg
2041 acaggtagta ctgagaattt ggaggttcct gatgatattt caacgggtaa aaggagaaaa
2101 gaattgggag ctatggcctt ctctactaca gccatcaact tttcaactgt caactcttct
2161 gcaggcttca gatccaagca gttggttaat aataaagata ctacatcctt tgaagacata
2221 agtccacaag gtgttagtga tgattctagt acgggatcaa gagttcatgc ttcaagacca
2281 gccagccttg atagtggcag aacatccact agcaatagca ataataatgc ctcactacat
2341 gaagtcaaag caggtgcagt taataaccaa agcaggccac aaagccacag cagtggagaa
2401 tttagcctgc ttcatgacca tgaggcttgg tccagcagtg gtagcagtcc aatccagtac
2461 ttgaaaagac agaccagatc aagcccagtg ctccagcaca aaatacctga aacactggag
2521 agtcgacatc acaagatcaa aactggttcc cctggaagtg aagttgttac tctacaacag
2581 tttttggaag aaagcaataa gcttacctca gtacagataa agtcctcaag tcaagagaat
2641 cttttagatg aagtaatgaa aagtttgtct gtctcttctg actttttggg aaaagacaaa
2701 ccagttagct gtggtctggc caggtcagta agtggaaaaa ccccagggga cttctatgat
2761 agacggacaa ctaagcctga gtttttgaga cctggtcctc gaaaaactga agatacctac
2821 ttcattagtt ctgcgggaaa acctacacca ggcactcaag gaaaaataaa attagtaaaa
2881 gaatcttctc tgtcacgaca atcaaaagat agtaaccctt atgcaacttt acctcgtgca
2941 agcagcgtga tctcaactgc cgaaggaact acacgaagga caagcatcca tgattttttg
3001 accaaggaca gtagactgcc tatatcagtt gattcaccac cagctgctgc tgacagcaac
3061 accactgcag catctagtga gtaccattta caccagtggt cctctcatat acttgacatc
3121 ccaacacata ctataggttc ttgtgcccaa aatgatttag ctatagacat gcctgagcct
3181 ctatatgccc aggctagaaa ctcaagaaca ggaaggtcac attttctaaa ccaaactttt
3241 gccactatta ggatgcctag tgatgcattc ggaatgttgg caaaagatag cataggacca
3301 tttactgtgg cccattcatc tcagccattc ttatccctga atacagaatt agttagtaac
3361 ataagtgggt tacctcctag gccagtcatc agaataactg accaggcttc tgcctctttg
3421 gataaacctg cacagaaaga aaatgaacag ttttctgatc atcagaaccc tagtaacagt
3481 aacctacagt tttctataaa tagcaacaat cttgtcactt ctgcatgcct ctatcctgat
3541 gacacagaag ctgcattgtt ggtttctgag gataatcaaa ctgtttggta tgaatatggt
3601 tgtatatgat caaaactgca caatataata tattgatgtt atttgatata cactgcttct
3661 ctaatatgat ttgaaaagtt gctgttaaca aaatatcatt tggctaggtt tttatttttt
3721 atttaaaatt gttgcacagt gttcagctgt acatgatggc atgtatatta atgtgaatgt
3781 gtaaccacac caaaacctgc atgaaatatt aattactttg tccattttct gcatgccttt
3841 taaaaacctt aaccatacat gctcctcctt cacatttttt gttgcctgat aagattgtta
3901 ctttgatatc cagaagcatg ttaaaacagt tgcatgctct cttaccaaga agacatttcc
3961 aagtcatatt tgctttgttg cttctggaaa aaaatgttca tttcctccct cccttcctcc
4021 tcttcccacc cctcacttgc tctgactgtc actccttttt ttcttccaga atgtgtactt
4081 tatattacat atgtacagta tcagtaggga aaatgtaaaa agatgttgtt ttcttttgtc
4141 atttaattag gccatctgtc ctgttttaaa gaaatagtta ataattcaac actttatata
4201 acaaatatta actaataccc atatttataa aacatttttc agatttaaaa gattgttaat
4261 acttataaac ttagtgttat tcttagaaaa ccccatcaaa tttaaatgtg atttacacag
4321 tgactaggaa catttgtatt tattgtttct tctctgcact tttcatcatc tgataaatac
4381 aagagctcaa gtaactgtct tttcttcaag atggcttcta tacttgaaat cagttaatac
4441 aatagttttt ccagttcttt ttttatagag agtcaaagag aaataaacca aattatattc
4501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//