LOCUS BX537972 4306 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686F2386 (from clone DKFZp686F2386).
ACCESSION BX537972
VERSION BX537972.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4306)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686F2386) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4306
/db_xref="H-InvDB:HIT000054756"
/organism="Homo sapiens"
/map="5q14.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686F2386"
/tissue_type="human retina"
/db_xref="taxon:9606"
CDS <1..1039
/codon_start=2
/gene="DKFZp686F2386"
/product="hypothetical protein"
/note="hypothetical protein"
/db_xref="GOA:Q7Z3D4"
/db_xref="H-InvDB:HIT000054756.16"
/db_xref="HGNC:HGNC:26969"
/db_xref="InterPro:IPR018392"
/db_xref="InterPro:IPR036779"
/db_xref="UniProtKB/Swiss-Prot:Q7Z3D4"
/protein_id="CAD97936.1"
/translation="GVSPKQRLGHELTRDSGGGGPFGHLLAECSLLTGTDFNIMAGRH
QNRSFPLPGVQSSGQVHAFGNCSDSDILEEDAEVYELRSRGKEKVRRSTSRDRLDDII
VLTKDIQEGDTLNAIALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKKFSSLTETL
CPPKGRQTSRHSSVQYSSEQQEILPANDSLAYSDSAGSFLKEVDRDIEQIVKCTDNKR
ENLNEVVSALTAQQMRFEPDNKNTQRKDPYYGADWGIGWWTAVVIMLIVGIITPVFYL
LYYEILAKVDVSHHSTVDSSHLHSKITPPSQQREMENGIVPTKGIHFSQQDDHKLYSQ
DSQSPAAQQET"
regulatory 4206..4211
/regulatory_class="polyA_signal_sequence"
polyA_site 4229
BASE COUNT 1483 a 619 c 768 g 1436 t
ORIGIN
1 gggggtcagc ccaaagcaga ggctcggcca tgaacttacc cgggacagcg gcggcggcgg
61 accttttggc catcttctcg cagagtgctc cctgctaacg gggacagatt ttaacattat
121 ggcagggagg catcagaatc gtagttttcc tcttccagga gttcagtcaa gtggtcaagt
181 acatgcattt ggaaattgtt cagacagtga tattttggag gaggatgctg aagtgtatga
241 gcttcgatcc agaggaaaag agaaagtccg aagaagtaca tcaagagata gacttgacga
301 cattatagta ttaacaaaag atatacaaga aggagataca ttaaatgcaa tagcccttca
361 gtactgttgt acggtagcag atatcaagag agttaacaat ctcatcagtg atcaagactt
421 ttttgccctt aggtctatca aaattccagt aaaaaagttc agttccttga ccgaaacact
481 ttgtcctcca aaaggaagac agacttcacg tcattcatct gttcaatact cttccgaaca
541 acaggaaatt ttgccagcta atgattctct tgcttacagt gactcagctg gtagcttttt
601 aaaagaagta gaccgagaca tagaacaaat agtaaagtgt acagacaata agagagagaa
661 cctcaatgag gtagtatcgg ccttaacagc acaacaaatg cgttttgaac ctgataacaa
721 aaacactcaa cgtaaagacc cctattatgg agcagactgg ggaatagggt ggtggacagc
781 tgtagtgata atgttgatag taggtataat aacaccagtg ttttatttgt tgtattatga
841 aattttagct aaggtggatg ttagtcatca ttcaacagtg gactcttcac atttacattc
901 aaaaatcaca cccccatcac agcagagaga aatggaaaat ggaattgtgc caactaaagg
961 aatacatttc agccaacaag atgatcataa actgtatagt caagattctc agtcacctgc
1021 tgctcaacag gaaacatagc aattagctca taatcaaatg ttagtggtca ggtcacatgt
1081 gcatctggaa tgtggtgaat cagttatatc caataatagc ttcaaaggca gaatttagag
1141 agattgagga tgcttttgtt tttaacaaaa gggtttcaca ctttgaaaat tttttgagca
1201 actagttgtt gatgttgaga gcagttgatc cataaatctg gtgtgtgaat gtttcaagca
1261 gaaattaatt taaatgtgtg tttaggaagt acttaacttg gaagatgtat catttttctt
1321 aaaatgcatg tttaaatttt atttttttaa gtaattttta aaaagtttat taatgttaaa
1381 tttatgatgc agaatgatag catcagatgt ctgcagctga aaaaaattta ctactatgaa
1441 cccccaaaat attcagttgc aagaaaattt gattctaaaa ttattcatgg taggatacgt
1501 aacacacccc ttcaaaactt ttaaaaaata catttagcac atgtgctatg aaagcatacg
1561 tacaaagaga aaggggaaag tgatttataa ttcctacgac agaggccaag aaatagatta
1621 aaatattttc aagaccccaa aataatgtat tatggttggg aagtcagtag aacactggaa
1681 taggtgaaga cctgacagta atttttgtct taagaatgct ttctttagga cagacccttt
1741 aacctcacct ctgtgcatct gtttttaaaa tgattatatt tgcctctgat atttgaaagc
1801 acttttgtag ttttgatgat gaaaaatata ttaaacgtgc atattaccat tatttaggaa
1861 ataattcctt atatactgtg ataaatcatt gctgttacat acagtaacat gccttaatta
1921 catttaatgc cttactgctt tatgtaagta aatccaagtt tcagaattaa aaataagcat
1981 tatttcatat ggtccaatca gattcgttac ataggctata taaatttgtc tccattttca
2041 ccatcaagca caaataattg ggtcaaaact gcctttgagg tctgttgaag aaaatggttc
2101 attaagcaaa aaagagtaga ggtattttat attagcagta acagacaaat tatttagtaa
2161 tcccttaacc tctgtttttc aaagagaaaa tatccaattt agactttttt cctgatctct
2221 atatatagca tcaagttggg aaacaaaggc caaaggtgta tagattgctt gaaagggggt
2281 ggtagtgcct ctttttaaga tctgttgagt cggctacagt ctggctaagt aagaagcatt
2341 tgcatactga ttccatcatt taatctttaa aagtatgtgt tttaaaaatg taaccagaat
2401 gattcttcaa tagaaatgag atttggtgga gtctggattg cctgttttgt atataatata
2461 tacttaagat atataatacc acctcatttt ctgggcatta tttcctaatt gttgatgttt
2521 caggcttttg ataagtcatt ttatatattt caaatttaac tcagaataag taaatattta
2581 tggcaaatgc agttttatgt actttcagga gaagaccatc aggaaaagac aggacaaaga
2641 agtcaaacat taaagccctt gcaaatatta gaggacctta gacaattacc aaaaagtgtt
2701 taatagggaa gttgcaaatg attctcttag taaattaaac atttaaaaag tagttttaat
2761 gtgccttggg catcttgaaa agaagagtgt gatataattt atgcttagtg ttaactggtc
2821 attttacatt gtatttatta agtctgctga aaaatgaggt tttaaggaag aaaatgcaga
2881 ttattttagg gtaaacaggc caggtgtcct ttgaagaact ttgtttacat caaattgatg
2941 aaattacagt gattccttac tttttttgct agttgtactt tgaaattgtt atgggttcga
3001 tttccaaaat atgtaactta ttttttaaag gaataaggtg tgctgtgtat ttgttgatta
3061 aaaatcattt gtcttgcaga gtatcctttt ttgaaggaaa tatacatcct tataacacat
3121 caggtagttt tcttttttct gtatttaaat tatatatttg aattaattga atataatttg
3181 agttacatat aattctatat aaaggttaca tattgaatta tggttctaat ctgtttagga
3241 aagaaatgaa ttttctaagc atttaataca tttggaataa ttttagtttc taaaaagtac
3301 taatgtaagt taagtttata tcaaatgcaa attaccttgt ataactaaca agcacagtta
3361 ttgtttaaca ttatggattt taattgtgtt gacacccttc tttgaatttg ttgctttaca
3421 tgtgtgtctg tgtgtgtgtc tgcatgtgtg cacgcatgta cttgtatgca atgtaaaggt
3481 aacagcagaa tcattgcatt tggtttactt aaaattttgg agttagcaag taaacaaaaa
3541 gctgatagtt ttatgaagtc tcggttaaaa taaaatttct ttgctatctc actcttagga
3601 agttatggag ttcatatttt caaaagatat gttaaaaatg gttacacact ctgctggcca
3661 cattaaaaat tagaagactc atgttaaatt atctcctcca aaggactttt tatttacagc
3721 ttttcttttc ctggactcta cctgcttggt tcagtgtcct gaagagttat ttaaatgaac
3781 cactacttag taattagttc ttttttaaag tatctacttc taaaattacc tagttgaaaa
3841 tatgaaggat atgcttagtt ttagaaatat catgaagcaa ggatctagtc agtgttacag
3901 ggtaaaggtg gagtttttta aagtctgtat ttaaatggtg cactgatgga ttcattttta
3961 atctgcatta caaaaatgtt gctcaggtaa tcagtatttt cttccacgta tgcgcatatt
4021 gcactgttag atcatagaaa tatctgaatg ctttaatttt tatgtatgca aaatctataa
4081 atcttttgta taatgtattt tatacaaatg taactgtaga acattgttag catgtgtatc
4141 tgtaaaacca gtttttaaaa ttttttgccc catatttttc atattttgaa agatctccaa
4201 catgtaataa agtttctctt attcaatcta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaga aaaaaaaaaa aaaaaa
//