LOCUS BX537962 3994 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686F10107 (from clone DKFZp686F10107);
complete cds.
ACCESSION BX537962
VERSION BX537962.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3994)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686F10107) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3994
/db_xref="H-InvDB:HIT000054746"
/organism="Homo sapiens"
/map="22q13.1"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686F10107"
/tissue_type="human fetal kidney"
/db_xref="taxon:9606"
CDS 286..2439
/codon_start=1
/gene="DKFZp686F10107"
/product="hypothetical protein"
/note="sad1 unc-84 domain protein 2, N-terminus elongated"
/db_xref="GOA:Q9UH99"
/db_xref="H-InvDB:HIT000054746.13"
/db_xref="HGNC:HGNC:14210"
/db_xref="InterPro:IPR008979"
/db_xref="InterPro:IPR012919"
/db_xref="InterPro:IPR030272"
/db_xref="InterPro:IPR040994"
/db_xref="PDB:3UNP"
/db_xref="PDB:4DXR"
/db_xref="PDB:4DXS"
/db_xref="PDB:4DXT"
/db_xref="PDB:4FI9"
/db_xref="UniProtKB/Swiss-Prot:Q9UH99"
/protein_id="CAD97926.1"
/translation="MSRRSQRLTRYSQGDDDGSSSSGGSSVAGSQSTLFKDSPLRTLK
RKSSNMKRLSPAPQLGPSSDAHTSYYSESLVHESWFPPRSSLEELHGDANWGEDLRVR
RRRGTGGSESSRASGLVGRKATEDFLGSSSGYSSEDDYVGYSDVDQQSSSSRLRSAVS
RAGSLLWMVATSPGRLFRLLYWWAGTTWYRLTTAASLLDVFVLTRRFSSLKTFLWFLL
PLLLLTCLTYGAWYFYPYGLQTFHPALVSWWAAKDSRRPDEGWEARDSSPHFQAEQRV
MSRVHSLERRLEALAAEFSSNWQKEAMRLERLELRQGAPGQGGGGGLSHEDTLALLEG
LVSRREAALKEDFRRETAARIQEELSALRAEHQQDSEDLFKKIVRASQESEARIQQLK
SEWQSMTQESFQESSVKELRRLEDQLAGLQQELAALALKQSSVAEEVGLLPQQIQAVR
DDVESQFPAWISQFLARGGGGRVGLLQREEMQAQLRELESKILTHVAEMQGKSAREAA
ASLSLTLQKEGVIGVTEEQVHHIVKQALQRYSEDRIGLADYALESGGASVISTRCSET
YETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAFQGPQGFAVVRLSARIRPTAV
TLEHVPKALSPNSTISSAPRDFAIFGFDEDLQQEGTLLGKFTYDQDGEPIQTFHFQAP
TMATYQVVELRILTNWGHPEYTCIYRFRVHGEPAH"
regulatory 3955..3960
/regulatory_class="polyA_signal_sequence"
polyA_site 3971
BASE COUNT 769 a 1131 c 1277 g 817 t
ORIGIN
1 ggggttttgt gccagacagg ccgtttccag ggacaggcag ttcccagcct ctgcctgtca
61 gaactcaggg cctcagagga aggcccgttt tgttcagttc taaaacaaaa caaaacaaag
121 caatgggggg cgcggtgtga cttagagagc caggaggcgc gcctttggtg acaatttctg
181 caggtgtcac ctccttcagc aggacagagg ctaagaggag tccctgtgtg ggcagctgga
241 gccttcagat tctcttcagg ggaagagtcc acatcccacc tcatcatgtc ccgaagaagc
301 cagcgcctca cgcgctactc ccagggtgac gatgacggca gcagcagcag cggagggagc
361 tcggtggctg ggagtcagag caccctgttt aaagacagtc ctctcaggac cttgaagagg
421 aaatccagca acatgaagcg cctgtcccca gcgccacagc tgggcccgtc ctctgatgca
481 cacacctcct actacagtga gtcgctggtc cacgagtcct ggttcccacc caggagctcc
541 ctggaggaac tgcatggtga cgccaactgg ggtgaggacc tgcgggtgcg gaggaggaga
601 ggcacgggtg gctcagagag cagcagggcc agcgggcttg tggggcgcaa ggccaccgag
661 gacttcctgg gctcttcctc gggctactcc tctgaggacg actacgtggg ctactcggat
721 gtggaccagc agagttccag ctcgcggctc cgaagcgccg tctcacgggc gggctcctta
781 ctctggatgg tggccacttc gccaggccgg ctcttcagac ttctctactg gtgggctggc
841 accacctggt accgcctgac cacagctgcc tccctccttg acgtcttcgt tttaaccagg
901 cgcttctcgt ccctgaagac gttcctctgg ttcctgctgc cgctgctctt gctgacgtgc
961 ctgacgtatg gtgcttggta tttctacccc tatgggctgc agacattcca ccctgctttg
1021 gtttcctggt gggcagcgaa ggacagcagg aggccggatg agggctggga agccagagac
1081 tcatcgccac atttccaggc tgagcagcgt gttatgtccc gggtacactc tctggagcgg
1141 cgtctggaag ctcttgctgc tgaattttcc tccaactggc agaaggaggc catgcggctg
1201 gaacgtctgg agctgcggca aggggctcct ggccagggag gtggtggtgg cctgagccac
1261 gaggacaccc tggcgctgct ggaggggcta gtgagccgcc gtgaagctgc cctgaaggag
1321 gatttccgca gggaaactgc tgctcgcatc caggaagaac tgtctgccct gagagcagag
1381 catcagcaag actcagaaga cctcttcaag aagatcgtcc gggcctccca ggagtccgag
1441 gctcgcatcc agcagctgaa gtcagagtgg caaagcatga cccaggagtc cttccaggag
1501 agctctgtga aggagctgag gcggctggag gaccagctgg ccggcctgca gcaggagctg
1561 gcggctctgg cactgaagca gagctcggtg gcggaagaag tgggcctgct gccccagcag
1621 atccaggccg tgcgggacga cgtggaatct cagttcccgg cctggatcag tcagttcctt
1681 gcccgaggtg gagggggccg cgtggggctc cttcagagag aggagatgca agctcagctg
1741 cgagagctgg agagcaagat cctcacccat gtggcagaga tgcagggcaa gtcggccagg
1801 gaagccgcgg cctccctgag cctgacgctg cagaaagaag gtgtgattgg agtgacagag
1861 gagcaggtgc accacatcgt gaagcaggcc ctgcagcgct acagtgagga ccgcatcggg
1921 ctggcagact acgccctgga gtcaggaggg gccagcgtca tcagcacccg atgttctgag
1981 acctacgaga ccaagacggc cctcctcagc ctcttcggca tccccctgtg gtaccactcc
2041 cagtcacccc gagtcatcct ccagccagat gtgcacccag gcaactgctg ggccttccag
2101 gggccacaag gcttcgccgt ggtccgcctc tctgcccgca tccgccccac agccgttacc
2161 ttagagcatg tgcccaaggc cttgtcaccc aacagcacta tctccagtgc ccccagggac
2221 ttcgccatct ttgggtttga cgaagacctg cagcaggagg ggacactcct tggcaagttc
2281 acttacgatc aggacggcga gcctattcag acgtttcact ttcaggcccc tacgatggcc
2341 acgtaccagg tggtggagct gcggatcctg actaactggg gccaccccga gtacacctgc
2401 atctaccgct tcagagtgca tggggagccc gcccactagc cctgcttact ggtgcctgct
2461 gccagccatc tgggagtggg tgaacagcac cccgccgctt cccccacacg cttgctcggc
2521 gctctgactt ctaggagcac aagagaggag cctgtggccc catgcagatg aaaaggacgg
2581 gcagggtctc ctgagcagca ggtggctcga ggcggttagc aggctccagc agctcccttc
2641 ttccttccct ctgtgcccgt ggcgtctgct tcccatcctg ggagtgtgta tatatgtagc
2701 atatcatggg ggactgggaa gttgggagag gtaggacctg actggtcttg gctggggtca
2761 ggggctggtg cctgggagct gatgaagcag gtgccagggc tgtgggaggg gcaagctacg
2821 gcctgggcta ggtgagctgc ctctgcccct gggcaaggaa gcgaggccct ctgggaggag
2881 ggtgcttagc tccagagcag gatgggactt ccccaggcag gaagcacttg atggagagct
2941 gcccagctct cctacaaggt tagtgccctc cacctaggga agcatgaacc acagggtccc
3001 tgagggcctt cgacaaaagt gtgtatttgt cccggggagg gtagcagtgg gccatggggc
3061 ttcttgtgcc ctaaagggga ctggctgctg tgatcttcta aggggcccag ggccaaccct
3121 gtaggcttcc cctctgctgg ggacggtagt tgcttttctc tctcctgatg ctaggttggg
3181 gcccaccctg ctccctgttc ctgctagggc ctgccagtgc ccctgagctt gctttccaca
3241 ttctcccagg gtatggagac ctagacctgt ctttggggcc attagcatct ggggttatag
3301 caagaagagt ggggagcatg gaactcctgg gctcttgtgg ggacgttcag ggtatcgggg
3361 tgcgaggtct gtctgcaccg gcccccacat ctaaccaggc cctgatgtag gggtcgtccg
3421 ctcaggctgc ccccttgggc tcttgcagct cttgttcagg tagtcgccct tctggtttgt
3481 tctctgtggg gcagttggtg ggggctgggg gaagaggctg gcagaagtta ccctggatag
3541 ggaagggggg ggaggggact tttagagcca gcaggcccca ctgtattatg tatatatttt
3601 tcaaggtctg tttttctaac tgaaaagcta agggcttgat tcctagcccc gttctgtggg
3661 gcactgggtg atactcagtt tcttgttcct ggccgtggag aggggcctgg ggcactggtt
3721 ccggctgtgt ctggtggtct ggctgcgggg aaggggcaag aaggcgggca ggccttcact
3781 gcagcactga gcctcaaatc cgctctggag catgaggctg gatgcagtgg tggtgaggcc
3841 gccccgctcc atcccgaggc agccagggtt tgttttgcgc tctcctgtca caaatgctgc
3901 actattggtt cttaagttct ttatctccag atcctaattt atgcctatgc aaaaaataaa
3961 tgacgcccaa gagtaaaaaa aaaaaaaaaa aaaa
//