LOCUS BX537956 2228 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686A15192 (from clone DKFZp686A15192);
complete cds.
ACCESSION BX537956
VERSION BX537956.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2228)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686A15192) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2228
/db_xref="H-InvDB:HIT000054740"
/organism="Homo sapiens"
/map="2q37.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686A15192"
/tissue_type="human esophagus tumor"
/db_xref="taxon:9606"
CDS 111..2108
/codon_start=1
/gene="DKFZp686A15192"
/product="hypothetical protein"
/note="similar to hypothetical protein (Mus musculus)"
/db_xref="GOA:Q7Z3E5"
/db_xref="H-InvDB:HIT000054740.15"
/db_xref="HGNC:HGNC:20730"
/db_xref="InterPro:IPR006594"
/db_xref="InterPro:IPR011989"
/db_xref="InterPro:IPR016024"
/db_xref="InterPro:IPR040369"
/db_xref="UniProtKB/Swiss-Prot:Q7Z3E5"
/protein_id="CAD97923.1"
/translation="MGDILAHESELLGLVKEYLDFAEFEDTLKTFSKECKIKGKPLCK
TVGGSFRDSKSLTIQKDLVAAFDNGDQKVFFDLWEEHISSSIRDGDSFAQKLEFYLHI
HFAIYLLKYSVGRPDKEELDEKISYFKTYLETKGAALSQTTEFLPFYALPFVPNPMVH
PSFKELFQDSWTPELKLKLEKFLALISKASNTPKLLTIYKENGQSNKEILQQLHQQLV
EAERRSVTYLKRYNKIQADYHNLIGVTAELVDSLEATVSGKMITPEYLQSVCVRLFSN
QMRQSLAHSVDFTRPGTASTMLRASLAPVKLKDVPLLPSLDYEKLKKDLILGSDRLKA
FLLQALRWRLTTSHPGEQRETVLQAYISNDLLDCYSHNQRSVLQLLHSTSDVVRQYMA
RLINAFASLAEGRLYLAQNTKVLQMLEGRLKEEDKDIITRENVLGALQKFSLRRPLQT
AMIQDGLIFWLVDVLKDPDCLSDYTLEYSVALLMNLCLRSTGKNMCAKVAGLVLKVLS
DLLGHENHEIQPYVNGALYSILSVPSIREEARAMGMEDILRCFIKEGNAEMIRQIEFI
IKQLNSEELPDGVLESDDDEDEDDEEDHDIMEADLDKDELIQPQLGELSGEKLLTTEY
LGIMTNTGKTRRKGLANVQWSGDEPLQRPVTPGGHRNGYPV"
regulatory 2192..2197
/regulatory_class="polyA_signal_sequence"
polyA_site 2209
BASE COUNT 619 a 516 c 580 g 513 t
ORIGIN
1 ggcccgggtg acggctgcgg aggtggcggc cgggctggga tagcgcgagt gtccgcggcc
61 gagcagcaga gatttttgct gtgagaatta attaccagta acagttcaat atgggggaca
121 ttctggctca tgaatctgaa ttacttggac tagtgaaaga gtatttagat tttgctgaat
181 ttgaagacac cttgaaaaca ttttcaaaag aatgcaaaat aaaaggaaaa ccactgtgta
241 aaacagtagg cggatctttc agagactcca aatcattgac aattcagaag gatcttgtcg
301 ctgcatttga caacggagac cagaaggtgt tcttcgatct gtgggaggag cacatttcaa
361 gttccatccg agatggggac tcctttgccc agaagctgga attctatctc cacatccatt
421 ttgccatcta tcttttgaag tactctgtgg ggagaccgga caaagaggag ctggatgaaa
481 agatttccta cttcaaaacc tacctggaga ccaaaggggc agccttgagc cagaccacag
541 agtttcttcc tttctatgcc cttccttttg ttcccaaccc tatggtgcac ccctcattta
601 aagaactctt ccaggattcc tggactccag agttaaagtt gaagttggaa aagtttctag
661 ctttaatatc taaagccagc aacacgccaa agcttttaac aatatataag gagaatggac
721 aaagtaacaa agaaatcttg cagcagctcc accagcagct ggttgaagct gaacgtaggt
781 cagtgacata cctcaaacgg tacaataaga tccaggccga ctaccacaat ctcattggag
841 tcacagcaga gctggtggat tctctagagg ccacagtcag cggcaagatg atcacccctg
901 agtacctcca gagcgtctgt gtccgcctgt tcagtaacca gatgcggcag agcctggcgc
961 atagtgtgga cttcacgagg cctgggacgg catccaccat gttacgagcc tccttggcac
1021 ccgtgaaatt gaaggatgtc ccattactgc cctccttgga ttatgagaaa ctgaagaagg
1081 atttgatttt ggggagtgac cgcttgaaag ccttcttgtt gcaggctctg cgctggcgct
1141 tgaccacatc ccatcctgga gagcagaggg agaccgttct gcaagcctac atcagcaatg
1201 acctcttgga ctgttatagc cacaaccaga ggagtgtgct tcagttgctg cactccacga
1261 gcgacgtggt gcggcagtac atggccaggc tcatcaatgc ttttgcgtca ctggcagaag
1321 gtcgcctcta ccttgcccag aacacaaagg tgctgcagat gctggaggga aggctgaagg
1381 aggaggacaa ggatatcatc accagggaga atgttcttgg ggccctgcag aagttcagtc
1441 tcaggcgccc gctgcagaca gcgatgattc aagacggcct catcttctgg ctggttgatg
1501 ttctgaagga ccctgactgc ctgtctgact acacgctgga gtactcggtg gctttgctca
1561 tgaacctctg cctccgcagc acagggaaga acatgtgtgc caaggtggca ggcctcgtgc
1621 tcaaagtcct ttcggatctt cttggccatg aaaaccatga gatacagccg tatgtgaatg
1681 gagctctgta cagcatcctt tctgttccat ccattcgtga ggaagcaaga gcaatgggaa
1741 tggaagacat cctacgctgc ttcatcaaag aaggcaatgc tgaaatgatc cgccagatag
1801 aattcatcat caagcagcta aattccgaag agctaccaga tggtgttctt gaatctgatg
1861 atgatgaaga tgaagatgat gaagaggacc atgacatcat ggaagccgat ctggacaaag
1921 acgaactgat ccagccccag ctcggagaac tctcaggaga gaagcttctg accacggagt
1981 acctggggat catgaccaac acggggaaga caaggcggaa ggggctggct aatgtgcagt
2041 ggagcgggga tgagcccctg caaaggcccg tcacccccgg cggccacaga aacgggtacc
2101 cagtgtaagt cagggctaaa ggaagcggga attgactttc ttaagctttg ttttgattac
2161 agtgtaagat gtatgtattt ttaaaattcg aaataaagca ttcattttga aaaaaaaaaa
2221 aaaaaaaa
//